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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP920784
Clone id YMU001_000141_E08
Library
Length 463
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000141_E08.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
GTGTAATATGAGATTTTTTATATGTACAAAAGACACAATTGGGCAGTAATCTGTATCAGC
ATGAGCTATGAAGAGTAGTCAGGCTTTGTTTCACACTGAGATGCAGGCAATGCCATCACT
CGCAATTTAGCGAGCCATCTCTTGATAAAGTAATGTTCCATAACACATGACTAGCAATTT
AAACCTGACAGAGGCCTTGAATGAAATGCATCAAGTACATCAGTGCCTCGAAGCCACTGG
AATCGACCATGGCGTTGGCCATCTCATTGGGCAAAAGAACTTCTGATGTATGGAAATAAA
ATCATCCAATCATCGGTGTCGCACTGCATTGATTATCATCAAGCAACATACCTTTCAGGC
TTTTGGTAAGCCATATTGCAGTCTCTCTGGGAGACACTTTGCCTCGTCCAAAAGGCTTGA
GCACAATGGCAAGCTCATCAAATCGCTGCTGCTGGAGTAGTTG
■■Homology search results ■■ -
sp_hit_id Q0WPH8
Definition sp|Q0WPH8|NEK5_ARATH Serine/threonine-protein kinase Nek5 OS=Arabidopsis thaliana
Align length 42
Score (bit) 69.3
E-value 7.0e-12
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP920784|Adiantum capillus-veneris mRNA, clone:
YMU001_000141_E08.
         (450 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q0WPH8|NEK5_ARATH Serine/threonine-protein kinase Nek5 OS=Ara...    69   7e-12
sp|Q94CU5|NEK5_ORYSJ Serine/threonine-protein kinase Nek5 OS=Ory...    66   8e-11
sp|Q6ZEZ5|NEK3_ORYSJ Serine/threonine-protein kinase Nek3 OS=Ory...    66   8e-11
sp|Q10GB1|NEK1_ORYSJ Serine/threonine-protein kinase Nek1 OS=Ory...    64   4e-10
sp|Q60DG4|NEK4_ORYSJ Serine/threonine-protein kinase Nek4 OS=Ory...    61   2e-09
sp|Q2QMH1|NEK2_ORYSJ Serine/threonine-protein kinase Nek2 OS=Ory...    61   3e-09
sp|A2ZMH2|NEK2_ORYSI Serine/threonine-protein kinase Nek2 OS=Ory...    61   3e-09
sp|Q9SLI2|NEK1_ARATH Serine/threonine-protein kinase Nek1 OS=Ara...    60   3e-09
sp|Q9CAU7|NEK2_ARATH Serine/threonine-protein kinase Nek2 OS=Ara...    60   6e-09
sp|Q8RXT4|NEK4_ARATH Serine/threonine-protein kinase Nek4 OS=Ara...    58   2e-08
sp|Q8RX66|NEK3_ARATH Serine/threonine-protein kinase Nek3 OS=Ara...    58   2e-08
sp|Q6YY75|NEK6_ORYSJ Serine/threonine-protein kinase Nek6 OS=Ory...    55   2e-07
sp|Q9LT35|NEK6_ARATH Serine/threonine-protein kinase Nek6 OS=Ara...    53   7e-07
sp|Q9LHI7|NEK7_ARATH Serine/threonine-protein kinase Nek7 OS=Ara...    42   0.001
sp|Q947C4|TPSD1_GINBI Levopimaradiene synthase, chloroplastic OS...    32   1.6  
sp|Q5R5M5|ENPP3_PONAB Ectonucleotide pyrophosphatase/phosphodies...    31   2.1  
sp|O14638|ENPP3_HUMAN Ectonucleotide pyrophosphatase/phosphodies...    31   2.1  
sp|O74429|VIP1_SCHPO Inositol hexakisphosphate and diphosphoinos...    31   2.8  
sp|Q9S4X5|YUBA_ECOLI Uncharacterized protein yubA OS=Escherichia...    30   4.8  
sp|P97675|ENPP3_RAT Ectonucleotide pyrophosphatase/phosphodieste...    30   6.1  

>sp|Q0WPH8|NEK5_ARATH Serine/threonine-protein kinase Nek5
            OS=Arabidopsis thaliana GN=NEK5 PE=1 SV=1
          Length = 956

 Score = 69.3 bits (168), Expect = 7e-12
 Identities = 31/42 (73%), Positives = 38/42 (90%)
 Frame = -1

Query: 447  LLQQQRFDELAIVLKPFGRGKVSPRETAIWLTKSLKGMLLDD 322
            LL+Q R +ELAIVL+PFG+ KVSPRETAIWL KSLKGM+++D
Sbjct: 901  LLEQSRLEELAIVLQPFGKNKVSPRETAIWLAKSLKGMMIED 942


>sp|Q94CU5|NEK5_ORYSJ Serine/threonine-protein kinase Nek5 OS=Oryza
            sativa subsp. japonica GN=NEK5 PE=2 SV=1
          Length = 943

 Score = 65.9 bits (159), Expect = 8e-11
 Identities = 30/42 (71%), Positives = 35/42 (83%)
 Frame = -1

Query: 447  LLQQQRFDELAIVLKPFGRGKVSPRETAIWLTKSLKGMLLDD 322
            LLQ  R +ELA+VLKPFG+ KVSPRETAIWL KS KGM+ D+
Sbjct: 896  LLQHNRLEELAVVLKPFGKDKVSPRETAIWLAKSFKGMMNDE 937


>sp|Q6ZEZ5|NEK3_ORYSJ Serine/threonine-protein kinase Nek3 OS=Oryza
           sativa subsp. japonica GN=NEK3 PE=2 SV=1
          Length = 585

 Score = 65.9 bits (159), Expect = 8e-11
 Identities = 30/38 (78%), Positives = 34/38 (89%)
 Frame = -1

Query: 450 QLLQQQRFDELAIVLKPFGRGKVSPRETAIWLTKSLKG 337
           QLLQQ+RF+EL I+LKPFG GK SPRETAIWL+KS KG
Sbjct: 545 QLLQQERFEELGILLKPFGPGKASPRETAIWLSKSFKG 582


>sp|Q10GB1|NEK1_ORYSJ Serine/threonine-protein kinase Nek1 OS=Oryza
           sativa subsp. japonica GN=NEK1 PE=2 SV=1
          Length = 599

 Score = 63.5 bits (153), Expect = 4e-10
 Identities = 29/37 (78%), Positives = 33/37 (89%)
 Frame = -1

Query: 450 QLLQQQRFDELAIVLKPFGRGKVSPRETAIWLTKSLK 340
           QLLQQ+R+DEL ++LKPFG  KVSPRETAIWLTKS K
Sbjct: 559 QLLQQERYDELGVLLKPFGPEKVSPRETAIWLTKSFK 595


>sp|Q60DG4|NEK4_ORYSJ Serine/threonine-protein kinase Nek4 OS=Oryza
            sativa subsp. japonica GN=NEK4 PE=2 SV=1
          Length = 943

 Score = 61.2 bits (147), Expect = 2e-09
 Identities = 27/42 (64%), Positives = 35/42 (83%)
 Frame = -1

Query: 447  LLQQQRFDELAIVLKPFGRGKVSPRETAIWLTKSLKGMLLDD 322
            LL+  R +ELAIVL+PFG+ KVSPRETAIWL +S KGM+ ++
Sbjct: 896  LLENNRLEELAIVLQPFGKNKVSPRETAIWLARSFKGMMNEE 937


>sp|Q2QMH1|NEK2_ORYSJ Serine/threonine-protein kinase Nek2 OS=Oryza
           sativa subsp. japonica GN=NEK2 PE=2 SV=1
          Length = 591

 Score = 60.8 bits (146), Expect = 3e-09
 Identities = 28/37 (75%), Positives = 32/37 (86%)
 Frame = -1

Query: 450 QLLQQQRFDELAIVLKPFGRGKVSPRETAIWLTKSLK 340
           QLLQQ+R++EL I+LKPFG  K SPRETAIWLTKS K
Sbjct: 551 QLLQQERYEELGILLKPFGPEKASPRETAIWLTKSFK 587


>sp|A2ZMH2|NEK2_ORYSI Serine/threonine-protein kinase Nek2 OS=Oryza
           sativa subsp. indica GN=NEK2 PE=2 SV=1
          Length = 591

 Score = 60.8 bits (146), Expect = 3e-09
 Identities = 28/37 (75%), Positives = 32/37 (86%)
 Frame = -1

Query: 450 QLLQQQRFDELAIVLKPFGRGKVSPRETAIWLTKSLK 340
           QLLQQ+R++EL I+LKPFG  K SPRETAIWLTKS K
Sbjct: 551 QLLQQERYEELGILLKPFGPEKASPRETAIWLTKSFK 587


>sp|Q9SLI2|NEK1_ARATH Serine/threonine-protein kinase Nek1
           OS=Arabidopsis thaliana GN=NEK1 PE=2 SV=2
          Length = 612

 Score = 60.5 bits (145), Expect = 3e-09
 Identities = 27/37 (72%), Positives = 33/37 (89%)
 Frame = -1

Query: 450 QLLQQQRFDELAIVLKPFGRGKVSPRETAIWLTKSLK 340
           +LLQ+ R+DEL ++LKPFG GKVSPRETAIW+ KSLK
Sbjct: 553 RLLQEGRYDELNVLLKPFGPGKVSPRETAIWIAKSLK 589


>sp|Q9CAU7|NEK2_ARATH Serine/threonine-protein kinase Nek2
           OS=Arabidopsis thaliana GN=NEK2 PE=2 SV=1
          Length = 606

 Score = 59.7 bits (143), Expect = 6e-09
 Identities = 26/37 (70%), Positives = 33/37 (89%)
 Frame = -1

Query: 450 QLLQQQRFDELAIVLKPFGRGKVSPRETAIWLTKSLK 340
           +LLQ +R+DEL ++L+PFG GKVSPRETAIWL+KS K
Sbjct: 561 RLLQDERYDELNVLLRPFGPGKVSPRETAIWLSKSFK 597


>sp|Q8RXT4|NEK4_ARATH Serine/threonine-protein kinase Nek4
           OS=Arabidopsis thaliana GN=NEK4 PE=2 SV=1
          Length = 555

 Score = 58.2 bits (139), Expect = 2e-08
 Identities = 26/37 (70%), Positives = 32/37 (86%)
 Frame = -1

Query: 450 QLLQQQRFDELAIVLKPFGRGKVSPRETAIWLTKSLK 340
           +LLQQ+R+DEL ++LKPFG  +VS RETAIWLTKS K
Sbjct: 515 KLLQQERYDELGVLLKPFGAERVSSRETAIWLTKSFK 551
tr_hit_id A9RQH0
Definition tr|A9RQH0|A9RQH0_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens
Align length 43
Score (bit) 75.9
E-value 1.0e-12
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP920784|Adiantum capillus-veneris mRNA, clone:
YMU001_000141_E08.
         (450 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9RQH0|A9RQH0_PHYPA Predicted protein (Fragment) OS=Physcomit...    76   1e-12
tr|A7PGD0|A7PGD0_VITVI Chromosome chr6 scaffold_15, whole genome...    71   3e-11
tr|A5BFG7|A5BFG7_VITVI Putative uncharacterized protein OS=Vitis...    71   3e-11
tr|B8B7P0|B8B7P0_ORYSI Putative uncharacterized protein OS=Oryza...    66   1e-09
tr|B7ECN6|B7ECN6_ORYSJ cDNA clone:J013086M12, full insert sequen...    66   1e-09
tr|A3BH40|A3BH40_ORYSJ Putative uncharacterized protein OS=Oryza...    66   1e-09
tr|Q2HSJ8|Q2HSJ8_MEDTR Protein kinase OS=Medicago truncatula GN=...    65   1e-09
tr|B8AN30|B8AN30_ORYSI Putative uncharacterized protein OS=Oryza...    64   5e-09
tr|B7EMV6|B7EMV6_ORYSJ cDNA clone:J033073A22, full insert sequen...    64   5e-09
tr|A3AKP5|A3AKP5_ORYSJ Putative uncharacterized protein OS=Oryza...    64   5e-09
tr|A7PUE6|A7PUE6_VITVI Chromosome chr7 scaffold_31, whole genome...    63   6e-09
tr|Q8SA64|Q8SA64_9ROSI NIMA-related protein kinase OS=Populus tr...    62   1e-08
tr|Q947T1|Q947T1_SOLLC LSTK-1-like kinase OS=Solanum lycopersicu...    62   1e-08
tr|B8AYQ1|B8AYQ1_ORYSI Putative uncharacterized protein OS=Oryza...    61   2e-08
tr|A3B4G5|A3B4G5_ORYSJ Putative uncharacterized protein OS=Oryza...    61   2e-08
tr|B7EKP8|B7EKP8_ORYSJ cDNA clone:J023075D08, full insert sequen...    61   3e-08
tr|A7Q5Y4|A7Q5Y4_VITVI Chromosome chr14 scaffold_54, whole genom...    60   7e-08
tr|A5C5B1|A5C5B1_VITVI Putative uncharacterized protein OS=Vitis...    60   7e-08
tr|B6U7Q1|B6U7Q1_MAIZE Serine/threonine-protein kinase Nek4 OS=Z...    57   6e-07
tr|B8AEP6|B8AEP6_ORYSI Putative uncharacterized protein OS=Oryza...    55   2e-06
tr|A3A8J1|A3A8J1_ORYSJ Putative uncharacterized protein OS=Oryza...    55   2e-06
tr|A7PWA8|A7PWA8_VITVI Chromosome chr8 scaffold_34, whole genome...    52   1e-05
tr|A7NZT6|A7NZT6_VITVI Chromosome chr6 scaffold_3, whole genome ...    52   1e-05
tr|A5CAJ8|A5CAJ8_VITVI Putative uncharacterized protein OS=Vitis...    52   1e-05
tr|Q0WM30|Q0WM30_ARATH Putative uncharacterized protein At3g1220...    42   0.015
tr|A2WXA0|A2WXA0_ORYSI Putative uncharacterized protein OS=Oryza...    33   5.5  
tr|A3VBF8|A3VBF8_9RHOB Putative uncharacterized protein OS=Rhodo...    33   7.2  

>tr|A9RQH0|A9RQH0_PHYPA Predicted protein (Fragment)
           OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_69270 PE=4 SV=1
          Length = 811

 Score = 75.9 bits (185), Expect = 1e-12
 Identities = 37/43 (86%), Positives = 39/43 (90%)
 Frame = -1

Query: 450 QLLQQQRFDELAIVLKPFGRGKVSPRETAIWLTKSLKGMLLDD 322
           QLL Q R +ELAIVLKPFGRGKVSPRETAIWLTKSLKGML D+
Sbjct: 759 QLLSQHRLEELAIVLKPFGRGKVSPRETAIWLTKSLKGMLGDE 801


>tr|A7PGD0|A7PGD0_VITVI Chromosome chr6 scaffold_15, whole genome
            shotgun sequence OS=Vitis vinifera GN=GSVIVT00017494001
            PE=4 SV=1
          Length = 936

 Score = 70.9 bits (172), Expect = 3e-11
 Identities = 31/44 (70%), Positives = 40/44 (90%)
 Frame = -1

Query: 450  QLLQQQRFDELAIVLKPFGRGKVSPRETAIWLTKSLKGMLLDDN 319
            +LL+Q R +ELA+VLKPFG+ KVSPRETAIWL KSLKGM+++D+
Sbjct: 889  ELLEQSRLEELAVVLKPFGKDKVSPRETAIWLAKSLKGMMVEDS 932


>tr|A5BFG7|A5BFG7_VITVI Putative uncharacterized protein OS=Vitis
            vinifera GN=VITISV_032788 PE=4 SV=1
          Length = 1177

 Score = 70.9 bits (172), Expect = 3e-11
 Identities = 31/44 (70%), Positives = 40/44 (90%)
 Frame = -1

Query: 450  QLLQQQRFDELAIVLKPFGRGKVSPRETAIWLTKSLKGMLLDDN 319
            +LL+Q R +ELA+VLKPFG+ KVSPRETAIWL KSLKGM+++D+
Sbjct: 1130 ELLEQSRLEELAVVLKPFGKDKVSPRETAIWLAKSLKGMMVEDS 1173


>tr|B8B7P0|B8B7P0_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_25094 PE=4 SV=1
          Length = 585

 Score = 65.9 bits (159), Expect = 1e-09
 Identities = 30/38 (78%), Positives = 34/38 (89%)
 Frame = -1

Query: 450 QLLQQQRFDELAIVLKPFGRGKVSPRETAIWLTKSLKG 337
           QLLQQ+RF+EL I+LKPFG GK SPRETAIWL+KS KG
Sbjct: 545 QLLQQERFEELGILLKPFGPGKASPRETAIWLSKSFKG 582


>tr|B7ECN6|B7ECN6_ORYSJ cDNA clone:J013086M12, full insert sequence
           OS=Oryza sativa subsp. japonica PE=2 SV=1
          Length = 585

 Score = 65.9 bits (159), Expect = 1e-09
 Identities = 30/38 (78%), Positives = 34/38 (89%)
 Frame = -1

Query: 450 QLLQQQRFDELAIVLKPFGRGKVSPRETAIWLTKSLKG 337
           QLLQQ+RF+EL I+LKPFG GK SPRETAIWL+KS KG
Sbjct: 545 QLLQQERFEELGILLKPFGPGKASPRETAIWLSKSFKG 582


>tr|A3BH40|A3BH40_ORYSJ Putative uncharacterized protein OS=Oryza
           sativa subsp. japonica GN=OsJ_022362 PE=4 SV=1
          Length = 554

 Score = 65.9 bits (159), Expect = 1e-09
 Identities = 30/38 (78%), Positives = 34/38 (89%)
 Frame = -1

Query: 450 QLLQQQRFDELAIVLKPFGRGKVSPRETAIWLTKSLKG 337
           QLLQQ+RF+EL I+LKPFG GK SPRETAIWL+KS KG
Sbjct: 514 QLLQQERFEELGILLKPFGPGKASPRETAIWLSKSFKG 551


>tr|Q2HSJ8|Q2HSJ8_MEDTR Protein kinase OS=Medicago truncatula
            GN=MtrDRAFT_AC151522g2v2 PE=4 SV=1
          Length = 1001

 Score = 65.5 bits (158), Expect = 1e-09
 Identities = 29/43 (67%), Positives = 38/43 (88%)
 Frame = -1

Query: 447  LLQQQRFDELAIVLKPFGRGKVSPRETAIWLTKSLKGMLLDDN 319
            LLQQ R +ELA+VLKPFG+ KVS RETAIWL KSLKG++++++
Sbjct: 955  LLQQNRLEELAVVLKPFGKDKVSSRETAIWLAKSLKGLMVEES 997


>tr|B8AN30|B8AN30_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_12738 PE=4 SV=1
          Length = 555

 Score = 63.5 bits (153), Expect = 5e-09
 Identities = 29/37 (78%), Positives = 33/37 (89%)
 Frame = -1

Query: 450 QLLQQQRFDELAIVLKPFGRGKVSPRETAIWLTKSLK 340
           QLLQQ+R+DEL ++LKPFG  KVSPRETAIWLTKS K
Sbjct: 515 QLLQQERYDELGVLLKPFGPEKVSPRETAIWLTKSFK 551


>tr|B7EMV6|B7EMV6_ORYSJ cDNA clone:J033073A22, full insert sequence
           OS=Oryza sativa subsp. japonica PE=2 SV=1
          Length = 599

 Score = 63.5 bits (153), Expect = 5e-09
 Identities = 29/37 (78%), Positives = 33/37 (89%)
 Frame = -1

Query: 450 QLLQQQRFDELAIVLKPFGRGKVSPRETAIWLTKSLK 340
           QLLQQ+R+DEL ++LKPFG  KVSPRETAIWLTKS K
Sbjct: 559 QLLQQERYDELGVLLKPFGPEKVSPRETAIWLTKSFK 595


>tr|A3AKP5|A3AKP5_ORYSJ Putative uncharacterized protein OS=Oryza
           sativa subsp. japonica GN=OsJ_011367 PE=4 SV=1
          Length = 590

 Score = 63.5 bits (153), Expect = 5e-09
 Identities = 29/37 (78%), Positives = 33/37 (89%)
 Frame = -1

Query: 450 QLLQQQRFDELAIVLKPFGRGKVSPRETAIWLTKSLK 340
           QLLQQ+R+DEL ++LKPFG  KVSPRETAIWLTKS K
Sbjct: 550 QLLQQERYDELGVLLKPFGPEKVSPRETAIWLTKSFK 586