BP920797 |
Clone id |
YMU001_000141_G02 |
Library |
YMU01 |
Length |
402 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000141_G02. |
Accession |
BP920797 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
TTCTTCACATATATATGATTGCCAATTTTGTAAACATATCAGCGAGAAGCTGCTAGTATG ACATGAGTCGAAAACCGTCCACTTTGCATCAAGCAAGCTAAAAGAAGGCTATCTCACAGA TCTTGTGCTAAGCGCTCCCGGTTCTTCTCGGGAGCGGCTTGTACAGAACAATTGTAACAT ATTTAGAAAGAAAACGATGAGTTAACCCAAGAGCCAGCACAGATTGTACTGTTCTCCCTT TTTCAACATAGAGATGATTAAGGACCACATGTTGGGGTCGAAGCTGAGAAGCCGAAGCAT CGCTATTGTCATGCACATCCAGCAGTGTAAGATGTAGCTGTGGTGGCACTGCGGGTGGCT CTTTGCTAAAATCCTCTGACGATGGAAACAGGCTGGTATAAC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q84VQ1 |
Definition |
sp|Q84VQ1|KINB1_ARATH SNF1-related protein kinase regulatory subunit beta-1 OS=Arabidopsis thaliana |
Align length |
85 |
Score (bit) |
107.0 |
E-value |
2.0e-23 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP920797|Adiantum capillus-veneris mRNA, clone: YMU001_000141_G02. (402 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|Q84VQ1|KINB1_ARATH SNF1-related protein kinase regulatory sub... 107 2e-23 sp|Q9SCY5|KINB2_ARATH SNF1-related protein kinase regulatory sub... 102 5e-22 sp|Q9QZH4|AAKB2_RAT 5'-AMP-activated protein kinase subunit beta... 62 9e-10 sp|Q6PAM0|AAKB2_MOUSE 5'-AMP-activated protein kinase subunit be... 60 3e-09 sp|O43741|AAKB2_HUMAN 5'-AMP-activated protein kinase subunit be... 60 3e-09 sp|P80386|AAKB1_RAT 5'-AMP-activated protein kinase subunit beta... 54 2e-07 sp|Q9R078|AAKB1_MOUSE 5'-AMP-activated protein kinase subunit be... 54 2e-07 sp|Q5BIS9|AAKB1_BOVIN 5'-AMP-activated protein kinase subunit be... 54 2e-07 sp|Q5R801|AAKB1_PONAB 5'-AMP-activated protein kinase subunit be... 53 4e-07 sp|Q9Y478|AAKB1_HUMAN 5'-AMP-activated protein kinase subunit be... 53 4e-07 sp|P78789|YC63_SCHPO Uncharacterized protein C1919.03c OS=Schizo... 45 1e-04 sp|Q04739|GAL83_YEAST Glucose repression protein GAL83 OS=Saccha... 44 2e-04 sp|P34164|SIP2_YEAST Protein SIP2 OS=Saccharomyces cerevisiae GN... 42 7e-04 sp|Q9H0U6|RM18_HUMAN 39S ribosomal protein L18, mitochondrial OS... 31 2.2 sp|Q09925|LCB2_SCHPO Serine palmitoyltransferase 2 OS=Schizosacc... 31 2.2 sp|Q9C0A1|ZFHX2_HUMAN Zinc finger homeobox protein 2 OS=Homo sap... 30 2.8 sp|Q5RER0|ITIH5_PONAB Inter-alpha-trypsin inhibitor heavy chain ... 30 4.9 sp|Q86UX2|ITIH5_HUMAN Inter-alpha-trypsin inhibitor heavy chain ... 30 4.9 sp|Q92048|WNT2_DANRE Protein Wnt-2 OS=Danio rerio GN=wnt2 PE=2 SV=1 29 6.3 sp|Q0KL00|FA38A_RAT Protein FAM38A OS=Rattus norvegicus GN=Fam38... 29 6.3 sp|Q3ZBR7|RM18_BOVIN 39S ribosomal protein L18, mitochondrial OS... 29 6.3 sp|P23922|HBP1A_WHEAT Transcription factor HBP-1a OS=Triticum ae... 29 8.2 sp|Q4JC09|LEUC_SULAC 3-isopropylmalate dehydratase large subunit... 29 8.3
>sp|Q84VQ1|KINB1_ARATH SNF1-related protein kinase regulatory subunit beta-1 OS=Arabidopsis thaliana GN=KINB1 PE=1 SV=1 Length = 283
Score = 107 bits (267), Expect = 2e-23 Identities = 51/85 (60%), Positives = 67/85 (78%) Frame = -3
Query: 400 YTSLFPSSEDFSKEPPAVPPQLHLTLLDVHDNSDASASQLRPQHVVLNHLYVEKGRTVQS 221 Y P++ED++KEP AVPPQLHLTLL ++ +A +PQHVVLNH+++E+G T QS Sbjct: 202 YGQTLPAAEDYAKEPLAVPPQLHLTLLGT---TEETAIATKPQHVVLNHVFIEQGWTPQS 258
Query: 220 VLALGLTHRFLSKYVTIVLYKPLPR 146 ++ALGLTHRF SKY+T+VLYKPL R Sbjct: 259 IVALGLTHRFESKYITVVLYKPLTR 283
>sp|Q9SCY5|KINB2_ARATH SNF1-related protein kinase regulatory subunit beta-2 OS=Arabidopsis thaliana GN=KINB2 PE=1 SV=1 Length = 289
Score = 102 bits (255), Expect = 5e-22 Identities = 50/86 (58%), Positives = 66/86 (76%), Gaps = 1/86 (1%) Frame = -3
Query: 400 YTSLFPSSEDFSKEPPAVPPQLHLTLLDVHD-NSDASASQLRPQHVVLNHLYVEKGRTVQ 224 Y++L +ED+SKEPP VPP L +TLL++ N D + RPQHV+LNHLY++KG++ Sbjct: 204 YSNLLLGAEDYSKEPPVVPPHLQMTLLNLPAANPDIPSPLPRPQHVILNHLYMQKGKSGP 263
Query: 223 SVLALGLTHRFLSKYVTIVLYKPLPR 146 SV+ALG THRFL+KYVT+VLYK L R Sbjct: 264 SVVALGSTHRFLAKYVTVVLYKSLQR 289
>sp|Q9QZH4|AAKB2_RAT 5'-AMP-activated protein kinase subunit beta-2 OS=Rattus norvegicus GN=Prkab2 PE=1 SV=1 Length = 271
Score = 62.0 bits (149), Expect = 9e-10 Identities = 34/77 (44%), Positives = 44/77 (57%), Gaps = 1/77 (1%) Frame = -3
Query: 379 SEDFSKEPPAVPPQLHLTLLDVHDNSDASASQL-RPQHVVLNHLYVEKGRTVQSVLALGL 203 SE+ K PP +PP L +L+ N + L P HV+LNHLY T SV+ L Sbjct: 197 SEERFKSPPILPPHLLQVILNKDTNISCDPALLPEPNHVMLNHLYALS--TKDSVMVLSA 254
Query: 202 THRFLSKYVTIVLYKPL 152 THR+ KYVT +LYKP+ Sbjct: 255 THRYKKKYVTTLLYKPI 271
>sp|Q6PAM0|AAKB2_MOUSE 5'-AMP-activated protein kinase subunit beta-2 OS=Mus musculus GN=Prkab2 PE=2 SV=1 Length = 271
Score = 60.1 bits (144), Expect = 3e-09 Identities = 33/77 (42%), Positives = 44/77 (57%), Gaps = 1/77 (1%) Frame = -3
Query: 379 SEDFSKEPPAVPPQLHLTLLDVHDNSDASASQL-RPQHVVLNHLYVEKGRTVQSVLALGL 203 SE+ K PP +PP L +L+ N + L P HV+LNHLY + SV+ L Sbjct: 197 SEERFKSPPILPPHLLQVILNKDTNISCDPALLPEPNHVMLNHLYALSIK--DSVMVLSA 254
Query: 202 THRFLSKYVTIVLYKPL 152 THR+ KYVT +LYKP+ Sbjct: 255 THRYKKKYVTTLLYKPI 271
>sp|O43741|AAKB2_HUMAN 5'-AMP-activated protein kinase subunit beta-2 OS=Homo sapiens GN=PRKAB2 PE=1 SV=1 Length = 272
Score = 60.1 bits (144), Expect = 3e-09 Identities = 33/77 (42%), Positives = 44/77 (57%), Gaps = 1/77 (1%) Frame = -3
Query: 379 SEDFSKEPPAVPPQLHLTLLDVHDNSDASASQL-RPQHVVLNHLYVEKGRTVQSVLALGL 203 SE+ K PP +PP L +L+ N + L P HV+LNHLY + SV+ L Sbjct: 198 SEERFKSPPILPPHLLQVILNKDTNISCDPALLPEPNHVMLNHLYALSIK--DSVMVLSA 255
Query: 202 THRFLSKYVTIVLYKPL 152 THR+ KYVT +LYKP+ Sbjct: 256 THRYKKKYVTTLLYKPI 272
>sp|P80386|AAKB1_RAT 5'-AMP-activated protein kinase subunit beta-1 OS=Rattus norvegicus GN=Prkab1 PE=1 SV=4 Length = 270
Score = 54.3 bits (129), Expect = 2e-07 Identities = 30/76 (39%), Positives = 41/76 (53%), Gaps = 1/76 (1%) Frame = -3
Query: 376 EDFSKEPPAVPPQLHLTLLDVHDNSDASASQL-RPQHVVLNHLYVEKGRTVQSVLALGLT 200 E+ K PP +PP L +L+ + L P HV+LNHLY + V+ L T Sbjct: 197 EERFKAPPILPPHLLQVILNKDTGISCDPALLPEPNHVMLNHLYALSIK--DGVMVLSAT 254
Query: 199 HRFLSKYVTIVLYKPL 152 HR+ KYVT +LYKP+ Sbjct: 255 HRYKKKYVTTLLYKPI 270
>sp|Q9R078|AAKB1_MOUSE 5'-AMP-activated protein kinase subunit beta-1 OS=Mus musculus GN=Prkab1 PE=2 SV=2 Length = 270
Score = 54.3 bits (129), Expect = 2e-07 Identities = 30/76 (39%), Positives = 41/76 (53%), Gaps = 1/76 (1%) Frame = -3
Query: 376 EDFSKEPPAVPPQLHLTLLDVHDNSDASASQL-RPQHVVLNHLYVEKGRTVQSVLALGLT 200 E+ K PP +PP L +L+ + L P HV+LNHLY + V+ L T Sbjct: 197 EERFKAPPILPPHLLQVILNKDTGISCDPALLPEPNHVMLNHLYALSIK--DGVMVLSAT 254
Query: 199 HRFLSKYVTIVLYKPL 152 HR+ KYVT +LYKP+ Sbjct: 255 HRYKKKYVTTLLYKPI 270
>sp|Q5BIS9|AAKB1_BOVIN 5'-AMP-activated protein kinase subunit beta-1 OS=Bos taurus GN=PRKAB1 PE=2 SV=3 Length = 270
Score = 54.3 bits (129), Expect = 2e-07 Identities = 30/76 (39%), Positives = 41/76 (53%), Gaps = 1/76 (1%) Frame = -3
Query: 376 EDFSKEPPAVPPQLHLTLLDVHDNSDASASQL-RPQHVVLNHLYVEKGRTVQSVLALGLT 200 E+ K PP +PP L +L+ + L P HV+LNHLY + V+ L T Sbjct: 197 EERFKAPPILPPHLLQVILNKDTGISCDPALLPEPNHVMLNHLYALSIK--DGVMVLSAT 254
Query: 199 HRFLSKYVTIVLYKPL 152 HR+ KYVT +LYKP+ Sbjct: 255 HRYKKKYVTTLLYKPI 270
>sp|Q5R801|AAKB1_PONAB 5'-AMP-activated protein kinase subunit beta-1 OS=Pongo abelii GN=PRKAB1 PE=2 SV=3 Length = 270
Score = 53.1 bits (126), Expect = 4e-07 Identities = 29/76 (38%), Positives = 41/76 (53%), Gaps = 1/76 (1%) Frame = -3
Query: 376 EDFSKEPPAVPPQLHLTLLDVHDNSDASASQL-RPQHVVLNHLYVEKGRTVQSVLALGLT 200 E+ + PP +PP L +L+ + L P HV+LNHLY + V+ L T Sbjct: 197 EERFRAPPILPPHLLQVILNKDTGISCDPALLPEPNHVMLNHLYALSIK--DGVMVLSAT 254
Query: 199 HRFLSKYVTIVLYKPL 152 HR+ KYVT +LYKP+ Sbjct: 255 HRYKKKYVTTLLYKPI 270
>sp|Q9Y478|AAKB1_HUMAN 5'-AMP-activated protein kinase subunit beta-1 OS=Homo sapiens GN=PRKAB1 PE=1 SV=4 Length = 270
Score = 53.1 bits (126), Expect = 4e-07 Identities = 29/76 (38%), Positives = 41/76 (53%), Gaps = 1/76 (1%) Frame = -3
Query: 376 EDFSKEPPAVPPQLHLTLLDVHDNSDASASQL-RPQHVVLNHLYVEKGRTVQSVLALGLT 200 E+ + PP +PP L +L+ + L P HV+LNHLY + V+ L T Sbjct: 197 EERFRAPPILPPHLLQVILNKDTGISCDPALLPEPNHVMLNHLYALSIK--DGVMVLSAT 254
Query: 199 HRFLSKYVTIVLYKPL 152 HR+ KYVT +LYKP+ Sbjct: 255 HRYKKKYVTTLLYKPI 270
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9SLP6 |
Definition |
tr|A9SLP6|A9SLP6_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
83 |
Score (bit) |
113.0 |
E-value |
4.0e-24 |
Report |
|