BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP920801|Adiantum capillus-veneris mRNA, clone:
YMU001_000141_G10.
         (438 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q6ZPG2|WDR90_MOUSE WD repeat-containing protein 90 OS=Mus mus...    30   3.4  
sp|Q8W104|FBL17_ARATH F-box/LRR-repeat protein 17 OS=Arabidopsis...    30   3.4  
sp|Q9WVS9|CLOCK_RAT Circadian locomoter output cycles protein ka...    29   9.8  

>sp|Q6ZPG2|WDR90_MOUSE WD repeat-containing protein 90 OS=Mus
           musculus GN=Wdr90 PE=1 SV=2
          Length = 1874

 Score = 30.4 bits (67), Expect = 3.4
 Identities = 13/44 (29%), Positives = 21/44 (47%)
 Frame = -3

Query: 352 YDDRLHLERMFGDNTLITCGSGCLRLWLLINS*LNCCNVEASQF 221
           +D R      F +  + +CG G +RLW L    L  C V+  ++
Sbjct: 567 FDIRAFQVAFFDETRMASCGRGSVRLWRLRGGVLRSCAVDLGEY 610


>sp|Q8W104|FBL17_ARATH F-box/LRR-repeat protein 17 OS=Arabidopsis
           thaliana GN=FBL17 PE=1 SV=1
          Length = 593

 Score = 30.4 bits (67), Expect = 3.4
 Identities = 14/45 (31%), Positives = 25/45 (55%)
 Frame = +2

Query: 98  LITMSTGIAKTCSYSCTLHLKSASTSHDKSVLIDATHRRSLKLRS 232
           L+TM  G+ +TC+    +H+ S   SH   + + A + R L++ S
Sbjct: 314 LVTMVDGLGRTCTRLQNIHIASLKLSHTVVLSLTAVNFRYLRMLS 358


>sp|Q9WVS9|CLOCK_RAT Circadian locomoter output cycles protein kaput
           OS=Rattus norvegicus GN=Clock PE=2 SV=1
          Length = 862

 Score = 28.9 bits (63), Expect = 9.8
 Identities = 20/71 (28%), Positives = 34/71 (47%)
 Frame = +2

Query: 146 TLHLKSASTSHDKSVLIDATHRRSLKLRSFNIATIQL*IYQQPKAQAT*TTSDKSIISKH 325
           +L+  S ST +     I  THR S + R   +AT++L   Q  K   T    ++   S+H
Sbjct: 221 SLNSVSTSTHNGFEGTIQRTHRPSYEDRVCFVATVRLATPQFIKEMCTVEEPNEEFTSRH 280

Query: 326 PLKMKSIIIPY 358
            L+ K + + +
Sbjct: 281 SLEWKFLFLDH 291

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP920801|Adiantum capillus-veneris mRNA, clone:
YMU001_000141_G10.
         (438 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done

 ***** No hits found ******