BP920805
Clone id YMU001_000141_H11
Library
Length 519
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000141_H11.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
TTTTTTTTTTTTTTTTTGAAACAAAGCCCACAAGCTTTGCAGCAACACCGAGCAGAGCCA
GATTACATGTGGAAGATTCTTGCAAAGAATGCAAATTTGTACCCAGTGGGGCAACCTTGA
TTCATAACTTTTGCTTCAGCGATCAAATAACTTGCCTCTCCATCACTAGAAAAGTCACTA
TGTCAAACTCTAGCCAGCAATTCCCGCTTTGTAAAAATGATGATCAAACATCACCATAAA
TCATGAGACATAGTGGCCCTTCAGTATGCACAATCTACTGTTGCAACGAAAAAAAGAAGC
TTCTTTGAGGTGCATTTCAGTAATTCTGTATAAACCTTTCGTCTCTCACGTTCTTCTATG
TTAGCTGCCGCCAAGAACCATTACCCCTAAACTGACCATAACTGTACCCATATATATTTT
ATTATTCAACTATATAGAACTGAGACTTGAAGAGCTCCATACTTTGAGCACTTAAAAGCA
TCACAAGACGAAACTGCTTCAAGCCTTGAATCTCGTGAG
■■Homology search results ■■ -
sp_hit_id A1BEZ2
Definition sp|A1BEZ2|SAHH_CHLPD Adenosylhomocysteinase OS=Chlorobium phaeobacteroides (strain DSM 266)
Align length 22
Score (bit) 32.0
E-value 1.7
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP920805|Adiantum capillus-veneris mRNA, clone:
YMU001_000141_H11.
(502 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|A1BEZ2|SAHH_CHLPD Adenosylhomocysteinase OS=Chlorobium phaeob... 32 1.7
sp|A3KPF2|CARMB_ARATH Probable histone-arginine methyltransferas... 32 1.7
sp|Q9DE14|ATR_XENLA Serine/threonine-protein kinase atr OS=Xenop... 31 2.8
sp|Q96RD2|O52B2_HUMAN Olfactory receptor 52B2 OS=Homo sapiens GN... 31 2.9
sp|Q3B532|SAHH_PELLD Adenosylhomocysteinase OS=Pelodictyon luteo... 30 4.9
sp|Q8D2T1|CORA_WIGBR Magnesium transport protein corA OS=Wiggles... 30 6.4
sp|A4SF77|SAHH_PROVI Adenosylhomocysteinase OS=Prosthecochloris ... 30 8.3

>sp|A1BEZ2|SAHH_CHLPD Adenosylhomocysteinase OS=Chlorobium
phaeobacteroides (strain DSM 266) GN=ahcY PE=3 SV=1
Length = 471

Score = 32.0 bits (71), Expect = 1.7
Identities = 12/22 (54%), Positives = 17/22 (77%)
Frame = -2

Query: 147 DGEASYLIAEAKVMNQGCPTGY 82
DG A YL+AE +++N GC TG+
Sbjct: 373 DGHAIYLLAEGRLVNLGCATGH 394


>sp|A3KPF2|CARMB_ARATH Probable histone-arginine methyltransferase
CARM1B OS=Arabidopsis thaliana GN=CARM1B PE=2 SV=1
Length = 528

Score = 32.0 bits (71), Expect = 1.7
Identities = 17/39 (43%), Positives = 19/39 (48%)
Frame = +1

Query: 169 NSSQQFPLCKNDDQTSP*IMRHSGPSVCTIYCCNEKKKL 285
N Q+F L D TSP S P V T C NE K+L
Sbjct: 7 NKQQEFTLASVTDLTSPSSSLSSSPVVATFSCVNEVKEL 45


>sp|Q9DE14|ATR_XENLA Serine/threonine-protein kinase atr OS=Xenopus
laevis GN=atr PE=1 SV=2
Length = 2654

Score = 31.2 bits (69), Expect = 2.8
Identities = 15/42 (35%), Positives = 24/42 (57%)
Frame = +3

Query: 288 LRCISVILYKPFVSHVLLC*LPPRTITPKLTITVPIYILLFN 413
+RC+ P +SHV++ LP I PK T+ V Y+++ N
Sbjct: 1215 VRCLDQAYLGPLLSHVIVALLPLLHIQPKETVAVFRYLIVEN 1256


>sp|Q96RD2|O52B2_HUMAN Olfactory receptor 52B2 OS=Homo sapiens
GN=OR52B2 PE=2 SV=3
Length = 323

Score = 31.2 bits (69), Expect = 2.9
Identities = 11/42 (26%), Positives = 20/42 (47%)
Frame = -1

Query: 322 KGLYRITEMHLKEASFFRCNSRLCILKGHYVS*FMVMFDHHF 197
+ ++R+ + + C S LC++ YV F + HHF
Sbjct: 225 RAVFRLPSQDARHKALSTCGSHLCVILMFYVPSFFTLLTHHF 266


>sp|Q3B532|SAHH_PELLD Adenosylhomocysteinase OS=Pelodictyon luteolum
(strain DSM 273) GN=ahcY PE=3 SV=1
Length = 471

Score = 30.4 bits (67), Expect = 4.9
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = -2

Query: 147 DGEASYLIAEAKVMNQGCPTGY 82
DG YL+AE +++N GC TG+
Sbjct: 373 DGHCIYLLAEGRLVNLGCATGH 394


>sp|Q8D2T1|CORA_WIGBR Magnesium transport protein corA
OS=Wigglesworthia glossinidia brevipalpis GN=corA PE=3
SV=1
Length = 315

Score = 30.0 bits (66), Expect = 6.4
Identities = 16/54 (29%), Positives = 27/54 (50%)
Frame = -2

Query: 465 DAFKCSKYGALQVSVLYS*IIKYIWVQLWSV*G*WFLAAANIEERERRKVYTEL 304
+AFK K ++++ S +IK IW+ + N+ E ERR++ EL
Sbjct: 3 NAFKLHKKNLFRINIDQSSLIKSIWIDI-----------VNLTEEERRRIQNEL 45


>sp|A4SF77|SAHH_PROVI Adenosylhomocysteinase OS=Prosthecochloris
vibrioformis (strain DSM 265) (strain DSM 265) GN=ahcY
PE=3 SV=1
Length = 471

Score = 29.6 bits (65), Expect = 8.3
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = -2

Query: 147 DGEASYLIAEAKVMNQGCPTGY 82
DG Y++AE +++N GC TG+
Sbjct: 373 DGHCIYMLAEGRLVNLGCATGH 394


tr_hit_id B6LR41
Definition tr|B6LR41|B6LR41_BRAFL Putative uncharacterized protein OS=Branchiostoma floridae
Align length 39
Score (bit) 34.3
E-value 3.4
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP920805|Adiantum capillus-veneris mRNA, clone:
YMU001_000141_H11.
(502 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|B6LR41|B6LR41_BRAFL Putative uncharacterized protein OS=Branc... 34 3.4
tr|B6L1N8|B6L1N8_BRAFL Putative uncharacterized protein OS=Branc... 34 3.4

>tr|B6LR41|B6LR41_BRAFL Putative uncharacterized protein
OS=Branchiostoma floridae GN=BRAFLDRAFT_73601 PE=4 SV=1
Length = 500

Score = 34.3 bits (77), Expect = 3.4
Identities = 14/39 (35%), Positives = 18/39 (46%)
Frame = +1

Query: 1 ETKPTSFAATPSRARLHVEDSCKECKFVPSGATLIHNFC 117
E KPT A+P + + C C FVP+ A I C
Sbjct: 440 EDKPTENGASPEHQPIEISGKCDSCNFVPTAAQNIDRVC 478


>tr|B6L1N8|B6L1N8_BRAFL Putative uncharacterized protein
OS=Branchiostoma floridae GN=BRAFLDRAFT_65023 PE=4 SV=1
Length = 454

Score = 34.3 bits (77), Expect = 3.4
Identities = 14/39 (35%), Positives = 18/39 (46%)
Frame = +1

Query: 1 ETKPTSFAATPSRARLHVEDSCKECKFVPSGATLIHNFC 117
E KPT A+P + + C C FVP+ A I C
Sbjct: 394 EDKPTENGASPEHQPIEISGKCDSCNFVPTAAQNIDRVC 432