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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP920815
Clone id YMU001_000142_A11
Library
Length 498
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000142_A11.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
GAAGCTCGGGAGTGATTTGAAGGTTTAGAGGAAGAAAAAAAGCAAACATGAGAGCAGGTG
AAGCTGGTAATTTTTGACAGGTTTGGAAAGAAACTAACCGCAACAGAAGCGACAACAAAA
TTGAGAGTTTTGCTGCAAGATGTTCATTCTAACTTTAAAGAGTTTTTTCAACACTTCAAA
GGGCTTTGGGTTCAATTAGAGGCGGAATCCCAAGTACCTCCAGGGGATTTGTTTAAAGTA
TGTCAGTTTATGGATTGTGTCCATCCAAGTGTAAGGGAGAAGGTCGATCAAGAGGAGCCT
GCTACATTTGAAAGAGCTGTGGAAATTGCCGAGACCAAGAGCAAGAAGATCAATAGAACG
TCGGGAGCAAGGCCTGACACATACTGAGCTAGTTGTGATGCAACCAATGGTCCCTGTGAC
AACGGATGATAGAGTGGAGCGAGTGGTTCAAGGTCCAGATCCTGTTATGGCTCGGGTTTT
GCATGATCTTGCTGGTCA
■■Homology search results ■■ -
sp_hit_id P10073
Definition sp|P10073|ZSC22_HUMAN Zinc finger and SCAN domain-containing protein 22 OS=Homo sapiens
Align length 85
Score (bit) 30.4
E-value 4.8
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP920815|Adiantum capillus-veneris mRNA, clone:
YMU001_000142_A11.
         (498 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P10073|ZSC22_HUMAN Zinc finger and SCAN domain-containing pro...    30   4.8  
sp|A5GIK5|PYRB_SYNPW Aspartate carbamoyltransferase OS=Synechoco...    30   8.0  

>sp|P10073|ZSC22_HUMAN Zinc finger and SCAN domain-containing
           protein 22 OS=Homo sapiens GN=ZSCAN22 PE=1 SV=2
          Length = 491

 Score = 30.4 bits (67), Expect = 4.8
 Identities = 23/85 (27%), Positives = 40/85 (47%), Gaps = 6/85 (7%)
 Frame = +1

Query: 160 EFFQHFKGL---WVQLEAESQVPPGDLFKVCQFMDCVHPSVREKVDQEEPATFERAVEIA 330
           E   H + L   W+Q EA S+    +L  + QF+  + P ++  V  + P + E A  + 
Sbjct: 65  EALAHLRALCCQWLQPEAHSKEQILELLVLEQFLGALPPEIQAWVGAQSPKSGEEAAVLV 124

Query: 331 ETKSKKINRTS---GARPDTY*ASC 396
           E  ++ +++     GA P    ASC
Sbjct: 125 EDLTQVLDKRGWDPGAEPTE--ASC 147


>sp|A5GIK5|PYRB_SYNPW Aspartate carbamoyltransferase
           OS=Synechococcus sp. (strain WH7803) GN=pyrB PE=3 SV=1
          Length = 342

 Score = 29.6 bits (65), Expect = 8.0
 Identities = 13/31 (41%), Positives = 17/31 (54%)
 Frame = -3

Query: 445 HSLHSIIRCHRDHWLHHN*LSMCQALLPTFY 353
           H L S+ R HRD  L H  L +CQ  +P  +
Sbjct: 262 HMLTSLDRYHRDFGLSHERLQVCQVPIPVLH 292
tr_hit_id Q91591
Definition tr|Q91591|Q91591_XENLA 71 kDa protein OS=Xenopus laevis
Align length 67
Score (bit) 33.1
E-value 7.4
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP920815|Adiantum capillus-veneris mRNA, clone:
YMU001_000142_A11.
         (498 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q91591|Q91591_XENLA 71 kDa protein OS=Xenopus laevis PE=2 SV=1      33   7.4  
tr|Q6IRA3|Q6IRA3_XENLA MGC79993 protein OS=Xenopus laevis GN=MGC...    33   7.4  
tr|B7ZQR3|B7ZQR3_XENLA Putative uncharacterized protein MGC79993...    33   7.4  
tr|B7ZQQ9|B7ZQQ9_XENLA Putative uncharacterized protein MGC79993...    33   7.4  
tr|B0CW52|B0CW52_LACBS Predicted protein OS=Laccaria bicolor (st...    33   7.4  
tr|Q4FZ03|Q4FZ03_LEIMA Putative uncharacterized protein OS=Leish...    33   9.7  
tr|A4HRN9|A4HRN9_LEIIN Putative uncharacterized protein OS=Leish...    33   9.7  

>tr|Q91591|Q91591_XENLA 71 kDa protein OS=Xenopus laevis PE=2 SV=1
          Length = 653

 Score = 33.1 bits (74), Expect = 7.4
 Identities = 24/67 (35%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
 Frame = +1

Query: 139 DVHSNFKEFF-QHFKGLWVQLEAESQVPPGDLFKVCQFMDCVHPSVREKVDQEEPATFER 315
           D  SN +  F Q  KGL ++  A+ +    DL    QF+      VR+ V   EP T ++
Sbjct: 90  DAVSNLRTTFRQWIKGLSIETLADLE----DLMVKDQFLHICPAEVRQFVVDREPKTADK 145

Query: 316 AVEIAET 336
           A EIA+T
Sbjct: 146 AAEIADT 152


>tr|Q6IRA3|Q6IRA3_XENLA MGC79993 protein OS=Xenopus laevis
           GN=MGC79993 PE=2 SV=1
          Length = 818

 Score = 33.1 bits (74), Expect = 7.4
 Identities = 24/67 (35%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
 Frame = +1

Query: 139 DVHSNFKEFF-QHFKGLWVQLEAESQVPPGDLFKVCQFMDCVHPSVREKVDQEEPATFER 315
           D  SN +  F Q  KGL ++  A+ +    DL    QF+      VR+ V   EP T ++
Sbjct: 255 DAVSNLRTTFRQWIKGLSIETLADLE----DLMVKDQFLHICPAEVRQFVVDREPKTADK 310

Query: 316 AVEIAET 336
           A EIA+T
Sbjct: 311 AAEIADT 317


>tr|B7ZQR3|B7ZQR3_XENLA Putative uncharacterized protein MGC79993
           OS=Xenopus laevis GN=MGC79993 PE=2 SV=1
          Length = 818

 Score = 33.1 bits (74), Expect = 7.4
 Identities = 24/67 (35%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
 Frame = +1

Query: 139 DVHSNFKEFF-QHFKGLWVQLEAESQVPPGDLFKVCQFMDCVHPSVREKVDQEEPATFER 315
           D  SN +  F Q  KGL ++  A+ +    DL    QF+      VR+ V   EP T ++
Sbjct: 255 DAVSNLRTTFRQWIKGLSIETLADLE----DLMVKDQFLHICPAEVRQFVVDREPKTADK 310

Query: 316 AVEIAET 336
           A EIA+T
Sbjct: 311 AAEIADT 317


>tr|B7ZQQ9|B7ZQQ9_XENLA Putative uncharacterized protein MGC79993
           OS=Xenopus laevis GN=MGC79993 PE=2 SV=1
          Length = 818

 Score = 33.1 bits (74), Expect = 7.4
 Identities = 24/67 (35%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
 Frame = +1

Query: 139 DVHSNFKEFF-QHFKGLWVQLEAESQVPPGDLFKVCQFMDCVHPSVREKVDQEEPATFER 315
           D  SN +  F Q  KGL ++  A+ +    DL    QF+      VR+ V   EP T ++
Sbjct: 255 DAVSNLRTTFRQWIKGLSIETLADLE----DLMVKDQFLHICPAEVRQFVVDREPKTADK 310

Query: 316 AVEIAET 336
           A EIA+T
Sbjct: 311 AAEIADT 317


>tr|B0CW52|B0CW52_LACBS Predicted protein OS=Laccaria bicolor
           (strain S238N-H82) GN=LACBIDRAFT_308379 PE=4 SV=1
          Length = 582

 Score = 33.1 bits (74), Expect = 7.4
 Identities = 20/61 (32%), Positives = 31/61 (50%)
 Frame = +1

Query: 214 VPPGDLFKVCQFMDCVHPSVREKVDQEEPATFERAVEIAETKSKKINRTSGARPDTY*AS 393
           VPP  +  +  F+D  + + R  + QE  A  + A+E   T  ++I RTSG RP  +   
Sbjct: 497 VPPKMVQCISAFLDACYIARRADITQESLAALQTAIERFHT-HREIFRTSGVRPTGFNLP 555

Query: 394 C 396
           C
Sbjct: 556 C 556


>tr|Q4FZ03|Q4FZ03_LEIMA Putative uncharacterized protein
           OS=Leishmania major GN=LMJ_0127 PE=4 SV=1
          Length = 1000

 Score = 32.7 bits (73), Expect = 9.7
 Identities = 14/31 (45%), Positives = 19/31 (61%)
 Frame = -1

Query: 297 LLLIDLLPYTWMDTIHKLTYFKQIPWRYLGF 205
           L ++ +L YTWM TIH      Q+PW+Y  F
Sbjct: 169 LFVLSILLYTWMQTIH------QLPWKYEPF 193


>tr|A4HRN9|A4HRN9_LEIIN Putative uncharacterized protein
           OS=Leishmania infantum GN=LinJ02.0340 PE=4 SV=1
          Length = 1019

 Score = 32.7 bits (73), Expect = 9.7
 Identities = 14/31 (45%), Positives = 19/31 (61%)
 Frame = -1

Query: 297 LLLIDLLPYTWMDTIHKLTYFKQIPWRYLGF 205
           L ++ +L YTWM TIH      Q+PW+Y  F
Sbjct: 172 LFVLSILLYTWMQTIH------QLPWKYEPF 196