BP920816
Clone id YMU001_000142_A12
Library
Length 182
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000142_A12.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
TAGATATTACCTGCAGGTACTCCAAAAGTGACAATGCGTCCACTATGGGCATGCAGACAT
TGGTGACCCAAGGAGGAGGGTACGTCGTCAGCAGAGCTCATCACCTTTGTACAAAAGGAG
GAGGGCTCGCCAGCAGATCTTCCACAACAGCCTCCAGCTCAAGGAGGCTCTTATGCACTG
GC
■■Homology search results ■■ -
sp_hit_id Q54SF7
Definition sp|Q54SF7|AATC_DICDI Aspartate aminotransferase, cytoplasmic OS=Dictyostelium discoideum
Align length 40
Score (bit) 31.2
E-value 1.7
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP920816|Adiantum capillus-veneris mRNA, clone:
YMU001_000142_A12.
(182 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q54SF7|AATC_DICDI Aspartate aminotransferase, cytoplasmic OS=... 31 1.7

>sp|Q54SF7|AATC_DICDI Aspartate aminotransferase, cytoplasmic
OS=Dictyostelium discoideum GN=aatB PE=3 SV=1
Length = 438

Score = 31.2 bits (69), Expect = 1.7
Identities = 17/40 (42%), Positives = 19/40 (47%)
Frame = +1

Query: 7 LPAGTPKVTMRPLWACRHW*PKEEGTSSAELITFVQKEEG 126
LPAGT RP W H KE G SAE + K +G
Sbjct: 154 LPAGTVVYISRPSWTNHHNICKESGVQSAEYAYYDPKTKG 193


tr_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP920816|Adiantum capillus-veneris mRNA, clone:
YMU001_000142_A12.
(182 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done

***** No hits found ******