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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP920817
Clone id YMU001_000142_B02
Library
Length 499
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000142_B02.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
TACCTACCAAAAAAACTAATCCAATCCATAATGAGGCCCCTGAAAAAACAATATTGTTGT
TGTCAGACCATCCTCCGGGAGACGCAAACGCCACAGGCACACCAACAACTAGTAAAAATG
AGGTAGCAAGTAATGCAAATAAAGCAAATTGAGAAGCAGTAGTCAGTAATGCCGATTCCT
TTCGCATGAGGAATGGATTTTCTGTACCACTTAATCCGCATCCGACGGAGCTGCTGCGAA
GGTTTGCATTTGTAGGGAACAAACGTCTATTTCTAAGACTAATTTATCAAATCCCTACGA
CACCTCTCAACTAGAAAAGTTAGCTCAACCCCGCCCGCTATTGAAGATGTTTATCTCATG
TAGCGATATTTTCACCCCGTATCTGTTGTATCGTAGCAAGGGTAGAAAAAGAATCTCTCT
CTATACAAATAGATCTTAGAATCAAAAACTTTTGCGGTTCATTCGCAACTCGATTGTCTT
CCCTAATCATCTGGTAGAC
■■Homology search results ■■ -
sp_hit_id Q85FM4
Definition sp|Q85FM4|PSBZ_ADICA Photosystem II reaction center protein Z OS=Adiantum capillus-veneris
Align length 36
Score (bit) 75.5
E-value 1.0e-13
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP920817|Adiantum capillus-veneris mRNA, clone:
YMU001_000142_B02.
         (499 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q85FM4|PSBZ_ADICA Photosystem II reaction center protein Z OS...    75   1e-13
sp|Q06GR3|PSBZ_PIPCE Photosystem II reaction center protein Z OS...    67   5e-11
sp|Q06FV9|PSBZ_PELHO Photosystem II reaction center protein Z OS...    65   1e-10
sp|Q68S09|PSBZ_PANGI Photosystem II reaction center protein Z OS...    65   1e-10
sp|P09973|PSBZ_MARPO Photosystem II reaction center protein Z OS...    65   1e-10
sp|Q1KXW2|PSBZ_HELAN Photosystem II reaction center protein Z OS...    65   1e-10
sp|Q32RL8|PSBZ_ZYGCR Photosystem II reaction center protein Z OS...    64   3e-10
sp|Q8WI21|PSBZ_PSINU Photosystem II reaction center protein Z OS...    64   3e-10
sp|Q0G9W5|PSBZ_DAUCA Photosystem II reaction center protein Z OS...    64   3e-10
sp|Q0ZJ23|PSBZ_VITVI Photosystem II reaction center protein Z OS...    64   5e-10
sp|P09974|PSBZ_TOBAC Photosystem II reaction center protein Z OS...    63   7e-10
sp|Q2PMU0|PSBZ_SOYBN Photosystem II reaction center protein Z OS...    63   7e-10
sp|Q2VEH9|PSBZ_SOLTU Photosystem II reaction center protein Z OS...    63   7e-10
sp|Q2MIA3|PSBZ_SOLLC Photosystem II reaction center protein Z OS...    63   7e-10
sp|Q2MIJ0|PSBZ_SOLBU Photosystem II reaction center protein Z OS...    63   7e-10
sp|Q32902|PSBZ_PEA Photosystem II reaction center protein Z OS=P...    63   7e-10
sp|Q33C39|PSBZ_NICTO Photosystem II reaction center protein Z OS...    63   7e-10
sp|Q3C1I1|PSBZ_NICSY Photosystem II reaction center protein Z OS...    63   7e-10
sp|Q332Y1|PSBZ_LACSA Photosystem II reaction center protein Z OS...    63   7e-10
sp|Q06RD4|PSBZ_JASNU Photosystem II reaction center protein Z OS...    63   7e-10
sp|Q49L01|PSBZ_EUCGG Photosystem II reaction center protein Z OS...    63   7e-10
sp|Q09MI1|PSBZ_CITSI Photosystem II reaction center protein Z OS...    63   7e-10
sp|P59706|PSBZ_ATRBE Photosystem II reaction center protein Z OS...    63   7e-10
sp|P56790|PSBZ_ARATH Photosystem II reaction center protein Z OS...    63   7e-10
sp|Q5QA82|PSBZ_ACOGR Photosystem II reaction center protein Z OS...    63   7e-10
sp|Q9M3M6|PSBZ_SPIOL Photosystem II reaction center protein Z OS...    63   9e-10
sp|Q9MTN5|PSBZ_OENEH Photosystem II reaction center protein Z OS...    63   9e-10
sp|Q4VZN6|PSBZ_CUCSA Photosystem II reaction center protein Z OS...    63   9e-10
sp|Q5IHA3|PSBZ_CRYJA Photosystem II reaction center protein Z OS...    63   9e-10
sp|A0A332|PSBZ_COFAR Photosystem II reaction center protein Z OS...    63   9e-10

>sp|Q85FM4|PSBZ_ADICA Photosystem II reaction center protein Z
           OS=Adiantum capillus-veneris GN=psbZ PE=2 SV=1
          Length = 62

 Score = 75.5 bits (184), Expect = 1e-13
 Identities = 35/36 (97%), Positives = 35/36 (97%)
 Frame = -1

Query: 109 VVGVPVAFASPGGWSDNNNIVFSGASLWIGLVFLVG 2
           VVGVPVAFASPGGWSDN NIVFSGASLWIGLVFLVG
Sbjct: 20  VVGVPVAFASPGGWSDNKNIVFSGASLWIGLVFLVG 55


>sp|Q06GR3|PSBZ_PIPCE Photosystem II reaction center protein Z
           OS=Piper cenocladum GN=psbZ PE=3 SV=1
          Length = 62

 Score = 67.0 bits (162), Expect = 5e-11
 Identities = 30/36 (83%), Positives = 31/36 (86%)
 Frame = -1

Query: 109 VVGVPVAFASPGGWSDNNNIVFSGASLWIGLVFLVG 2
           V+GVPV FASP GWS N NIVFSG SLWIGLVFLVG
Sbjct: 20  VIGVPVVFASPDGWSSNKNIVFSGTSLWIGLVFLVG 55


>sp|Q06FV9|PSBZ_PELHO Photosystem II reaction center protein Z
           OS=Pelargonium hortorum GN=psbZ PE=3 SV=1
          Length = 62

 Score = 65.5 bits (158), Expect = 1e-10
 Identities = 29/36 (80%), Positives = 31/36 (86%)
 Frame = -1

Query: 109 VVGVPVAFASPGGWSDNNNIVFSGASLWIGLVFLVG 2
           ++GVPV FASP GWS N NIVFSG SLWIGLVFLVG
Sbjct: 20  LIGVPVVFASPEGWSSNKNIVFSGTSLWIGLVFLVG 55


>sp|Q68S09|PSBZ_PANGI Photosystem II reaction center protein Z
           OS=Panax ginseng GN=psbZ PE=3 SV=1
          Length = 62

 Score = 65.5 bits (158), Expect = 1e-10
 Identities = 28/36 (77%), Positives = 31/36 (86%)
 Frame = -1

Query: 109 VVGVPVAFASPGGWSDNNNIVFSGASLWIGLVFLVG 2
           ++GVPV FASP GWS N N+VFSG SLWIGLVFLVG
Sbjct: 20  LIGVPVVFASPDGWSSNKNVVFSGTSLWIGLVFLVG 55


>sp|P09973|PSBZ_MARPO Photosystem II reaction center protein Z
           OS=Marchantia polymorpha GN=psbZ PE=3 SV=1
          Length = 62

 Score = 65.5 bits (158), Expect = 1e-10
 Identities = 29/36 (80%), Positives = 31/36 (86%)
 Frame = -1

Query: 109 VVGVPVAFASPGGWSDNNNIVFSGASLWIGLVFLVG 2
           V+GVPV  ASP GWS N N+VFSGASLWIGLVFLVG
Sbjct: 20  VIGVPVVLASPEGWSSNKNVVFSGASLWIGLVFLVG 55


>sp|Q1KXW2|PSBZ_HELAN Photosystem II reaction center protein Z
           OS=Helianthus annuus GN=psbZ PE=3 SV=1
          Length = 62

 Score = 65.5 bits (158), Expect = 1e-10
 Identities = 28/36 (77%), Positives = 31/36 (86%)
 Frame = -1

Query: 109 VVGVPVAFASPGGWSDNNNIVFSGASLWIGLVFLVG 2
           ++GVPV FASP GWS N N+VFSG SLWIGLVFLVG
Sbjct: 20  LIGVPVVFASPDGWSSNKNVVFSGTSLWIGLVFLVG 55


>sp|Q32RL8|PSBZ_ZYGCR Photosystem II reaction center protein Z
           OS=Zygnema circumcarinatum GN=psbZ PE=3 SV=1
          Length = 62

 Score = 64.3 bits (155), Expect = 3e-10
 Identities = 29/36 (80%), Positives = 30/36 (83%)
 Frame = -1

Query: 109 VVGVPVAFASPGGWSDNNNIVFSGASLWIGLVFLVG 2
           V+GVPV  ASP GWS N N VFSGASLWIGLVFLVG
Sbjct: 20  VIGVPVVLASPDGWSSNKNTVFSGASLWIGLVFLVG 55


>sp|Q8WI21|PSBZ_PSINU Photosystem II reaction center protein Z
           OS=Psilotum nudum GN=psbZ PE=3 SV=1
          Length = 62

 Score = 64.3 bits (155), Expect = 3e-10
 Identities = 29/36 (80%), Positives = 31/36 (86%)
 Frame = -1

Query: 109 VVGVPVAFASPGGWSDNNNIVFSGASLWIGLVFLVG 2
           V+GVPV  ASP GWS + NIVFSGASLWIGLVFLVG
Sbjct: 20  VIGVPVVLASPDGWSSSKNIVFSGASLWIGLVFLVG 55


>sp|Q0G9W5|PSBZ_DAUCA Photosystem II reaction center protein Z
           OS=Daucus carota GN=psbZ PE=3 SV=1
          Length = 62

 Score = 64.3 bits (155), Expect = 3e-10
 Identities = 27/36 (75%), Positives = 31/36 (86%)
 Frame = -1

Query: 109 VVGVPVAFASPGGWSDNNNIVFSGASLWIGLVFLVG 2
           ++GVPV FASP GWS N N++FSG SLWIGLVFLVG
Sbjct: 20  LIGVPVVFASPDGWSSNKNVLFSGTSLWIGLVFLVG 55


>sp|Q0ZJ23|PSBZ_VITVI Photosystem II reaction center protein Z
           OS=Vitis vinifera GN=psbZ PE=3 SV=1
          Length = 62

 Score = 63.5 bits (153), Expect = 5e-10
 Identities = 28/36 (77%), Positives = 30/36 (83%)
 Frame = -1

Query: 109 VVGVPVAFASPGGWSDNNNIVFSGASLWIGLVFLVG 2
           ++ VPV FASP GWS N NIVFSG SLWIGLVFLVG
Sbjct: 20  LISVPVVFASPDGWSSNKNIVFSGTSLWIGLVFLVG 55
tr_hit_id A9U6P2
Definition tr|A9U6P2|A9U6P2_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens
Align length 72
Score (bit) 79.3
E-value 9.0e-14
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP920817|Adiantum capillus-veneris mRNA, clone:
YMU001_000142_B02.
         (499 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9U6P2|A9U6P2_PHYPA Predicted protein OS=Physcomitrella paten...    79   9e-14
tr|A4QM94|A4QM94_PINKO ORF83b OS=Pinus koraiensis PE=4 SV=1            75   2e-12
tr|B0FAU9|B0FAU9_9FABA Photosystem II reaction center Z protein ...    65   1e-09
tr|B0FAU8|B0FAU8_9FABA Photosystem II reaction center Z protein ...    65   1e-09
tr|B0FAU6|B0FAU6_9FABA Photosystem II reaction center Z protein ...    65   1e-09
tr|B0FAU4|B0FAU4_9FABA Photosystem II reaction center Z protein ...    65   1e-09
tr|B0FAU1|B0FAU1_9FABA Photosystem II reaction center Z protein ...    65   1e-09
tr|B0FAU0|B0FAU0_9FABA Photosystem II reaction center Z protein ...    65   1e-09
tr|B0FAR8|B0FAR8_9FABA Photosystem II reaction center Z protein ...    65   1e-09
tr|B0FAR0|B0FAR0_9FABA Photosystem II reaction center Z protein ...    65   1e-09
tr|B0FAQ8|B0FAQ8_9FABA Photosystem II reaction center Z protein ...    65   1e-09
tr|A9QB64|A9QB64_9SPER Photosystem II reaction center Z protein ...    65   1e-09
tr|A6H5G9|A6H5G9_CYCTA Photosystem II reaction center Z protein ...    65   1e-09
tr|B7T3L0|B7T3L0_9ROSI Photosystem II protein Z OS=Geranium palm...    65   2e-09
tr|B7T368|B7T368_9ROSI Photosystem II protein Z OS=Geranium caro...    65   2e-09
tr|B7T3T1|B7T3T1_9ROSI Photosystem II protein Z OS=Monsonia spec...    65   2e-09
tr|Q20BM4|Q20BM4_PANGI Photosystem II reaction center Z protein ...    64   3e-09
tr|A9QAY7|A9QAY7_9APIA Photosystem II reaction center Z protein ...    64   3e-09
tr|A2T328|A2T328_ANGEV Photosystem II reaction center Z protein ...    64   3e-09
tr|B7T3D9|B7T3D9_9ROSI Photosystem II protein Z OS=Geranium macr...    64   4e-09
tr|A3QP59|A3QP59_9ROSI Photosystem II reaction center Z protein ...    64   4e-09
tr|Q6YXP0|Q6YXP0_PHYPA Photosystem II reaction center Z protein ...    64   5e-09
tr|Q5GIP9|Q5GIP9_9ROSI Photosystem II reaction center Z protein ...    64   5e-09
tr|Q5GIP8|Q5GIP8_9ROSI Photosystem II reaction center Z protein ...    64   5e-09
tr|Q5GIP6|Q5GIP6_9ROSI Photosystem II reaction center Z protein ...    64   5e-09
tr|Q5GIP4|Q5GIP4_CASSA Photosystem II reaction center Z protein ...    64   5e-09
tr|Q5GIP2|Q5GIP2_9ROSI Photosystem II reaction center Z protein ...    64   5e-09
tr|Q5GIN8|Q5GIN8_9ROSI Photosystem II reaction center Z protein ...    64   5e-09
tr|Q5GIN4|Q5GIN4_9ROSI Photosystem II reaction center Z protein ...    64   5e-09
tr|Q5GIN2|Q5GIN2_CASCR Photosystem II reaction center Z protein ...    64   5e-09

>tr|A9U6P2|A9U6P2_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_103403 PE=4 SV=1
          Length = 83

 Score = 79.3 bits (194), Expect = 9e-14
 Identities = 39/72 (54%), Positives = 47/72 (65%)
 Frame = +3

Query: 3   PTKKTNPIHNEAPEKTILLLSDHPPGDANATGTPTTSKNEVASNANKAN*EAVVSNADSF 182
           PTKKTNP HNEAPE T  LL D P G+A+ TGTP T +NE+A NAN AN +A+V      
Sbjct: 7   PTKKTNPTHNEAPENTTFLLLDQPSGEASTTGTPITKRNEIAINANTANWKAIVMVMILQ 66

Query: 183 RMRNGFSVPLNP 218
             +N  S  +NP
Sbjct: 67  VQKNKISYTINP 78


>tr|A4QM94|A4QM94_PINKO ORF83b OS=Pinus koraiensis PE=4 SV=1
          Length = 83

 Score = 75.1 bits (183), Expect = 2e-12
 Identities = 34/54 (62%), Positives = 43/54 (79%)
 Frame = +3

Query: 3   PTKKTNPIHNEAPEKTILLLSDHPPGDANATGTPTTSKNEVASNANKAN*EAVV 164
           PTK+T+PIHN+ PE T  LL D P G+A+ATGTP TSKNE+A NAN A+ +A+V
Sbjct: 7   PTKRTDPIHNDTPENTTFLLLDQPSGEASATGTPITSKNEIAINANTADWKAIV 60


>tr|B0FAU9|B0FAU9_9FABA Photosystem II reaction center Z protein
           OS=Astragalus cruckshanksii GN=psbZ PE=3 SV=1
          Length = 62

 Score = 65.5 bits (158), Expect = 1e-09
 Identities = 28/36 (77%), Positives = 31/36 (86%)
 Frame = -1

Query: 109 VVGVPVAFASPGGWSDNNNIVFSGASLWIGLVFLVG 2
           ++GVPV FASP GWS N N+VFSG SLWIGLVFLVG
Sbjct: 20  LIGVPVVFASPDGWSSNKNVVFSGTSLWIGLVFLVG 55


>tr|B0FAU8|B0FAU8_9FABA Photosystem II reaction center Z protein
           OS=Astragalus johnstonii GN=psbZ PE=3 SV=1
          Length = 62

 Score = 65.5 bits (158), Expect = 1e-09
 Identities = 28/36 (77%), Positives = 31/36 (86%)
 Frame = -1

Query: 109 VVGVPVAFASPGGWSDNNNIVFSGASLWIGLVFLVG 2
           ++GVPV FASP GWS N N+VFSG SLWIGLVFLVG
Sbjct: 20  LIGVPVVFASPDGWSSNKNVVFSGTSLWIGLVFLVG 55


>tr|B0FAU6|B0FAU6_9FABA Photosystem II reaction center Z protein
           OS=Astragalus uniflorus GN=psbZ PE=3 SV=1
          Length = 62

 Score = 65.5 bits (158), Expect = 1e-09
 Identities = 28/36 (77%), Positives = 31/36 (86%)
 Frame = -1

Query: 109 VVGVPVAFASPGGWSDNNNIVFSGASLWIGLVFLVG 2
           ++GVPV FASP GWS N N+VFSG SLWIGLVFLVG
Sbjct: 20  LIGVPVVFASPDGWSSNKNVVFSGTSLWIGLVFLVG 55


>tr|B0FAU4|B0FAU4_9FABA Photosystem II reaction center Z protein
           OS=Astragalus curvicaulis GN=psbZ PE=3 SV=1
          Length = 62

 Score = 65.5 bits (158), Expect = 1e-09
 Identities = 28/36 (77%), Positives = 31/36 (86%)
 Frame = -1

Query: 109 VVGVPVAFASPGGWSDNNNIVFSGASLWIGLVFLVG 2
           ++GVPV FASP GWS N N+VFSG SLWIGLVFLVG
Sbjct: 20  LIGVPVVFASPDGWSSNKNVVFSGTSLWIGLVFLVG 55


>tr|B0FAU1|B0FAU1_9FABA Photosystem II reaction center Z protein
           OS=Astragalus pehuenches GN=psbZ PE=3 SV=1
          Length = 62

 Score = 65.5 bits (158), Expect = 1e-09
 Identities = 28/36 (77%), Positives = 31/36 (86%)
 Frame = -1

Query: 109 VVGVPVAFASPGGWSDNNNIVFSGASLWIGLVFLVG 2
           ++GVPV FASP GWS N N+VFSG SLWIGLVFLVG
Sbjct: 20  LIGVPVVFASPDGWSSNKNVVFSGTSLWIGLVFLVG 55


>tr|B0FAU0|B0FAU0_9FABA Photosystem II reaction center Z protein
           OS=Astragalus vagus GN=psbZ PE=3 SV=1
          Length = 62

 Score = 65.5 bits (158), Expect = 1e-09
 Identities = 28/36 (77%), Positives = 31/36 (86%)
 Frame = -1

Query: 109 VVGVPVAFASPGGWSDNNNIVFSGASLWIGLVFLVG 2
           ++GVPV FASP GWS N N+VFSG SLWIGLVFLVG
Sbjct: 20  LIGVPVVFASPDGWSSNKNVVFSGTSLWIGLVFLVG 55


>tr|B0FAR8|B0FAR8_9FABA Photosystem II reaction center Z protein
           OS=Astragalus douglasii GN=psbZ PE=3 SV=1
          Length = 62

 Score = 65.5 bits (158), Expect = 1e-09
 Identities = 28/36 (77%), Positives = 31/36 (86%)
 Frame = -1

Query: 109 VVGVPVAFASPGGWSDNNNIVFSGASLWIGLVFLVG 2
           ++GVPV FASP GWS N N+VFSG SLWIGLVFLVG
Sbjct: 20  LIGVPVVFASPDGWSSNKNVVFSGTSLWIGLVFLVG 55


>tr|B0FAR0|B0FAR0_9FABA Photosystem II reaction center Z protein
           OS=Astragalus preussii GN=psbZ PE=3 SV=1
          Length = 62

 Score = 65.5 bits (158), Expect = 1e-09
 Identities = 28/36 (77%), Positives = 31/36 (86%)
 Frame = -1

Query: 109 VVGVPVAFASPGGWSDNNNIVFSGASLWIGLVFLVG 2
           ++GVPV FASP GWS N N+VFSG SLWIGLVFLVG
Sbjct: 20  LIGVPVVFASPDGWSSNKNVVFSGTSLWIGLVFLVG 55