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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP920819
Clone id YMU001_000142_B04
Library
Length 572
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000142_B04.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
CTGCAGGTACTCCAGAGCAAAGGGAGAGTGATTGTACGCAGTATTCAGTATGGCCATCTC
CATAGCCGCTTCCTCGGCAGTTGTCGCTCCTAGCTGCGCCCCCGCTAGAGAGCTTGTCAA
AGAGCTTCTCTGGTCTCAAGGCCACTACCCGTGTTCGCCCCCAAGAGCCCCAACCCGCTC
GCCATCTCTAATGGCAGACGTGTGAGCGCCATGCTTGTGTGGAAGCCGTATGACAACAAG
AAGTTCGAGACTCTGTCCTACTTGCCGCCTTTGTCAAGTGAGCAGATTGCGAAGCAGGTG
GACTTCATGGTCCGAAAAGGCTGGACCCCTTGCATTGAGTTCGACAAAATCGGGAGCGTG
TACCGAGAGCACTTCCACGGCAGCAGCTACTACGATGGGCGGTACTGGGTGATGTGGAAG
CTGCCCATGTTTGGCTGCCAAGATGCCGCTGCTGTGCTGCGTGAAATTGCAGAGTGCGCC
AAGGAGTATCCTGAAGCCTTCATCCGTGTGCTGGGCTTTGACGCTAAGAGGCAGGTGCAG
GTCTCCGGCTTCCTTGTCCAGAAGCCCTCTGT
■■Homology search results ■■ -
sp_hit_id Q40250
Definition sp|Q40250|RBS_LACSA Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Lactuca sativa
Align length 128
Score (bit) 178.0
E-value 1.0e-44
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP920819|Adiantum capillus-veneris mRNA, clone:
YMU001_000142_B04.
         (572 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q40250|RBS_LACSA Ribulose bisphosphate carboxylase small chai...   178   1e-44
sp|O48550|RBS_ZANAE Ribulose bisphosphate carboxylase small chai...   178   2e-44
sp|Q96542|RBS_BETVE Ribulose bisphosphate carboxylase small chai...   177   3e-44
sp|P19310|RBS4_LEMGI Ribulose bisphosphate carboxylase small cha...   175   1e-43
sp|Q40004|RBS_HORVU Ribulose bisphosphate carboxylase small chai...   175   2e-43
sp|P19312|RBS6_LEMGI Ribulose bisphosphate carboxylase small cha...   175   2e-43
sp|P19311|RBS5_LEMGI Ribulose bisphosphate carboxylase small cha...   175   2e-43
sp|P05348|RBS_MAIZE Ribulose bisphosphate carboxylase small chai...   174   2e-43
sp|P19308|RBS2_LEMGI Ribulose bisphosphate carboxylase small cha...   174   4e-43
sp|P10053|RBS_PINTH Ribulose bisphosphate carboxylase small chai...   173   5e-43
sp|P19309|RBS3_LEMGI Ribulose bisphosphate carboxylase small cha...   173   5e-43
sp|O64416|RBS_MARPA Ribulose bisphosphate carboxylase small chai...   172   8e-43
sp|P16031|RBS_LARLA Ribulose bisphosphate carboxylase small chai...   172   8e-43
sp|P10795|RBS1A_ARATH Ribulose bisphosphate carboxylase small ch...   172   8e-43
sp|P24007|RBS_PYRPY Ribulose bisphosphate carboxylase small chai...   172   1e-42
sp|P00871|RBS1_WHEAT Ribulose bisphosphate carboxylase small cha...   172   1e-42
sp|P00872|RBS1_LEMGI Ribulose bisphosphate carboxylase small cha...   172   1e-42
sp|P10798|RBS3B_ARATH Ribulose bisphosphate carboxylase small ch...   172   1e-42
sp|P10797|RBS2B_ARATH Ribulose bisphosphate carboxylase small ch...   172   1e-42
sp|P26667|RBS2_WHEAT Ribulose bisphosphate carboxylase small cha...   171   2e-42
sp|P08705|RBS_HELAN Ribulose bisphosphate carboxylase small chai...   171   3e-42
sp|Q43832|RBS2_SPIOL Ribulose bisphosphate carboxylase small cha...   171   3e-42
sp|P10796|RBS1B_ARATH Ribulose bisphosphate carboxylase small ch...   171   3e-42
sp|O65349|RBS_CAPAN Ribulose bisphosphate carboxylase small chai...   170   4e-42
sp|P08135|RBS_RAPSA Ribulose bisphosphate carboxylase small chai...   170   5e-42
sp|Q02980|RBS_MALSP Ribulose bisphosphate carboxylase small chai...   170   5e-42
sp|P17673|RBS_TRIRP Ribulose bisphosphate carboxylase small chai...   169   7e-42
sp|O65194|RBS_MEDSA Ribulose bisphosphate carboxylase small chai...   169   9e-42
sp|P18566|RBS2_ORYSJ Ribulose bisphosphate carboxylase small cha...   168   2e-41
sp|P05346|RBS1_BRANA Ribulose bisphosphate carboxylase small cha...   168   2e-41

>sp|Q40250|RBS_LACSA Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Lactuca sativa GN=RBCS PE=2 SV=1
          Length = 181

 Score =  178 bits (452), Expect = 1e-44
 Identities = 79/128 (61%), Positives = 96/128 (75%), Gaps = 1/128 (0%)
 Frame = +1

Query: 187 SNGRRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQVDFMVRKGWTPCIEFD-KIGSVY 363
           SNG RV  M VW P   KK+ETLSYLPPLS E ++K++D+++R  W PC+EF+ + G VY
Sbjct: 50  SNGGRVQCMKVWPPIGLKKYETLSYLPPLSDEALSKEIDYLIRNKWIPCLEFELEHGFVY 109

Query: 364 REHFHGSSYYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEAFIRVLGFDAKRQVQV 543
           REH H   YYDGRYW MWKLPMFGC D+A V++E+ EC KEYP AFIRV+GFD  RQVQ 
Sbjct: 110 REHHHSPGYYDGRYWTMWKLPMFGCTDSAQVMKEVGECKKEYPNAFIRVIGFDNIRQVQC 169

Query: 544 SGFLVQKP 567
             F+V KP
Sbjct: 170 ISFIVAKP 177


>sp|O48550|RBS_ZANAE Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Zantedeschia aethiopica GN=RBCS PE=2
           SV=1
          Length = 178

 Score =  178 bits (451), Expect = 2e-44
 Identities = 81/138 (58%), Positives = 99/138 (71%)
 Frame = +1

Query: 154 FAPKSPNPLAISNGRRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQVDFMVRKGWTPC 333
           FA  S  P   SNG RV  M VW P   KKFETLSYLPPL+ EQ+ ++VD+++R GW PC
Sbjct: 41  FADSSKLP---SNGLRVRCMQVWPPEGKKKFETLSYLPPLTREQLGQEVDYLIRNGWIPC 97

Query: 334 IEFDKIGSVYREHFHGSSYYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEAFIRVL 513
           IEF K+G VYRE+ +   YYDGRYW MWKLPMFGC D++ VL+E+ EC+K YP+ F R++
Sbjct: 98  IEFCKVGFVYREYHNSPGYYDGRYWTMWKLPMFGCTDSSQVLKEVDECSKAYPDYFNRII 157

Query: 514 GFDAKRQVQVSGFLVQKP 567
           GFD  RQVQ   FL  KP
Sbjct: 158 GFDNTRQVQCISFLTYKP 175


>sp|Q96542|RBS_BETVE Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Betula verrucosa GN=RBCS1 PE=2 SV=1
          Length = 182

 Score =  177 bits (450), Expect = 3e-44
 Identities = 81/128 (63%), Positives = 97/128 (75%), Gaps = 1/128 (0%)
 Frame = +1

Query: 187 SNGRRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQVDFMVRKGWTPCIEFD-KIGSVY 363
           SNG RV  M VW P   KKFETLSYLPPLSSEQ+AK+VD+++RK   PC+EF+ + G VY
Sbjct: 52  SNGGRVQCMQVWPPLGLKKFETLSYLPPLSSEQLAKEVDYLLRKNLIPCLEFELEHGFVY 111

Query: 364 REHFHGSSYYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEAFIRVLGFDAKRQVQV 543
           REH     YYDGRYW MWKLPMFGC D++ VL+E+ EC K YP AFIR++GFD KRQVQ+
Sbjct: 112 REHNRSPGYYDGRYWTMWKLPMFGCNDSSQVLKELEECKKAYPSAFIRIIGFDNKRQVQI 171

Query: 544 SGFLVQKP 567
             F+  KP
Sbjct: 172 ISFIAYKP 179


>sp|P19310|RBS4_LEMGI Ribulose bisphosphate carboxylase small chain
           SSU40B, chloroplastic OS=Lemna gibba GN=SSU40B PE=3 SV=1
          Length = 177

 Score =  175 bits (444), Expect = 1e-43
 Identities = 85/147 (57%), Positives = 101/147 (68%), Gaps = 2/147 (1%)
 Frame = +1

Query: 136 SRPLPVFAPKSPNPLAI--SNGRRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQVDFM 309
           S P P    K+ N L+   SNG RVS M VW P   KKFETLSYLPPLS E +AK+VD++
Sbjct: 32  SVPFPA-TRKANNDLSTLPSNGGRVSCMQVWPPEGLKKFETLSYLPPLSVEDLAKEVDYL 90

Query: 310 VRKGWTPCIEFDKIGSVYREHFHGSSYYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEY 489
           +R  W PCIEF K G VYRE+     YYDGRYW MWKLPMFGC DA+ V+ E+ E  K Y
Sbjct: 91  LRNDWVPCIEFSKEGFVYRENHASPGYYDGRYWTMWKLPMFGCTDASQVIAEVEEAKKAY 150

Query: 490 PEAFIRVLGFDAKRQVQVSGFLVQKPS 570
           PE F+R++GFD KRQVQ   F+  KP+
Sbjct: 151 PEYFVRIIGFDNKRQVQCISFIAYKPT 177


>sp|Q40004|RBS_HORVU Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Hordeum vulgare PE=2 SV=1
          Length = 174

 Score =  175 bits (443), Expect = 2e-43
 Identities = 77/141 (54%), Positives = 98/141 (69%)
 Frame = +1

Query: 145 LPVFAPKSPNPLAISNGRRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQVDFMVRKGW 324
           LPV    + +  ++SNG R+  M VW     KKFETLSYLPPLS+E + KQVD+++R  W
Sbjct: 25  LPVSRRSNASSASVSNGGRIRCMQVWPIEGIKKFETLSYLPPLSTEALLKQVDYLIRSKW 84

Query: 325 TPCIEFDKIGSVYREHFHGSSYYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEAFI 504
            PC+EF K+G ++REH     YYDGRYW MWKLPMFGC DA  VL E+ E  KEYP+A++
Sbjct: 85  VPCLEFSKVGFIFREHNASPGYYDGRYWTMWKLPMFGCTDATQVLNEVEEVKKEYPDAYV 144

Query: 505 RVLGFDAKRQVQVSGFLVQKP 567
           R++GFD  RQVQ   F+  KP
Sbjct: 145 RIIGFDNMRQVQCVSFIAFKP 165


>sp|P19312|RBS6_LEMGI Ribulose bisphosphate carboxylase small chain
           SSU5B, chloroplastic OS=Lemna gibba GN=SSU5B PE=3 SV=1
          Length = 177

 Score =  175 bits (443), Expect = 2e-43
 Identities = 79/128 (61%), Positives = 93/128 (72%)
 Frame = +1

Query: 187 SNGRRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQVDFMVRKGWTPCIEFDKIGSVYR 366
           SNG RVS M VW P   KKFETLSYLPPLS E +AK+VD+++R  W PCIEF K G VYR
Sbjct: 50  SNGGRVSCMQVWPPEGLKKFETLSYLPPLSVEDLAKEVDYLLRNDWVPCIEFSKEGFVYR 109

Query: 367 EHFHGSSYYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEAFIRVLGFDAKRQVQVS 546
           E+     YYDGRYW MWKLPMFGC DA+ V+ E+ E  K YPE F+R++GFD KRQVQ  
Sbjct: 110 ENHASPGYYDGRYWTMWKLPMFGCTDASQVIAEVEEAKKAYPEYFVRIIGFDNKRQVQCI 169

Query: 547 GFLVQKPS 570
            F+  KP+
Sbjct: 170 SFIAYKPT 177


>sp|P19311|RBS5_LEMGI Ribulose bisphosphate carboxylase small chain
           SSU5A, chloroplastic OS=Lemna gibba GN=SSU5A PE=3 SV=1
          Length = 177

 Score =  175 bits (443), Expect = 2e-43
 Identities = 79/128 (61%), Positives = 93/128 (72%)
 Frame = +1

Query: 187 SNGRRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQVDFMVRKGWTPCIEFDKIGSVYR 366
           SNG RVS M VW P   KKFETLSYLPPLS E +AK+VD+++R  W PCIEF K G VYR
Sbjct: 50  SNGGRVSCMQVWPPEGLKKFETLSYLPPLSVEDLAKEVDYLLRNDWVPCIEFSKEGFVYR 109

Query: 367 EHFHGSSYYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEAFIRVLGFDAKRQVQVS 546
           E+     YYDGRYW MWKLPMFGC DA+ V+ E+ E  K YPE F+R++GFD KRQVQ  
Sbjct: 110 ENHASPGYYDGRYWTMWKLPMFGCTDASQVIAEVEEAKKAYPEYFVRIIGFDNKRQVQCI 169

Query: 547 GFLVQKPS 570
            F+  KP+
Sbjct: 170 SFIAYKPT 177


>sp|P05348|RBS_MAIZE Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Zea mays GN=RBCS PE=1 SV=1
          Length = 170

 Score =  174 bits (442), Expect = 2e-43
 Identities = 79/141 (56%), Positives = 97/141 (68%)
 Frame = +1

Query: 145 LPVFAPKSPNPLAISNGRRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQVDFMVRKGW 324
           LPV    S +   +SNG R+  M VW  Y NKKFETLSYLPPLS++ + KQVD+++R GW
Sbjct: 26  LPVARRSSRSLGNVSNGGRIRCMQVWPAYGNKKFETLSYLPPLSTDDLLKQVDYLLRNGW 85

Query: 325 TPCIEFDKIGSVYREHFHGSSYYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEAFI 504
            PC+EF K+G VYRE+     YYDGRYW MWKLPMFGC DA  V +E+ E  K YP+AF 
Sbjct: 86  IPCLEFSKVGFVYRENSTSPCYYDGRYWTMWKLPMFGCNDATQVYKELQEAIKSYPDAFH 145

Query: 505 RVLGFDAKRQVQVSGFLVQKP 567
           RV+GFD  +Q Q   F+  KP
Sbjct: 146 RVIGFDNIKQTQCVSFIAYKP 166


>sp|P19308|RBS2_LEMGI Ribulose bisphosphate carboxylase small chain
           SSU26, chloroplastic OS=Lemna gibba GN=SSU26 PE=3 SV=1
          Length = 177

 Score =  174 bits (440), Expect = 4e-43
 Identities = 78/128 (60%), Positives = 93/128 (72%)
 Frame = +1

Query: 187 SNGRRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQVDFMVRKGWTPCIEFDKIGSVYR 366
           SNG +VS M VW P   KKFETLSYLPPLS E +AK+VD+++R  W PCIEF K G VYR
Sbjct: 50  SNGGKVSCMQVWPPEGLKKFETLSYLPPLSVEDLAKEVDYLLRNDWVPCIEFSKEGFVYR 109

Query: 367 EHFHGSSYYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEAFIRVLGFDAKRQVQVS 546
           E+     YYDGRYW MWKLPMFGC DA+ V+ E+ E  K YPE F+R++GFD KRQVQ  
Sbjct: 110 ENHASPGYYDGRYWTMWKLPMFGCTDASQVIAEVEEAKKAYPEYFVRIIGFDNKRQVQCI 169

Query: 547 GFLVQKPS 570
            F+  KP+
Sbjct: 170 SFIAYKPT 177


>sp|P10053|RBS_PINTH Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Pinus thunbergii GN=RBCS PE=2 SV=1
          Length = 171

 Score =  173 bits (439), Expect = 5e-43
 Identities = 76/127 (59%), Positives = 95/127 (74%)
 Frame = +1

Query: 187 SNGRRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQVDFMVRKGWTPCIEFDKIGSVYR 366
           SNG RV  M VW P+ N KFETLSYLP L+ EQ+ K+V++++R  W PC+EFD  GS+ R
Sbjct: 44  SNGGRVRCMQVWPPFGNPKFETLSYLPTLTEEQLVKEVEYLLRNKWVPCLEFDLEGSISR 103

Query: 367 EHFHGSSYYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEAFIRVLGFDAKRQVQVS 546
           ++     YYDGRYWVMWKLPMFGC +A+ V+ E+ ECAK YP+AFIRV+GFD  RQVQ  
Sbjct: 104 KYNRSPGYYDGRYWVMWKLPMFGCTEASQVINEVRECAKAYPKAFIRVIGFDNVRQVQCI 163

Query: 547 GFLVQKP 567
            F+V KP
Sbjct: 164 SFIVHKP 170
tr_hit_id Q43110
Definition tr|Q43110|Q43110_PTEVI Ribulose bisphosphate carboxylase small chain OS=Pteris vittata
Align length 140
Score (bit) 264.0
E-value 3.0e-69
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP920819|Adiantum capillus-veneris mRNA, clone:
YMU001_000142_B04.
         (572 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q43110|Q43110_PTEVI Ribulose bisphosphate carboxylase small c...   264   3e-69
tr|A9TCL7|A9TCL7_PHYPA Ribulose bisphosphate carboxylase small c...   184   4e-45
tr|A9T3W5|A9T3W5_PHYPA Ribulose bisphosphate carboxylase small c...   182   9e-45
tr|Q9SEB9|Q9SEB9_LACSA Ribulose bisphosphate carboxylase small c...   181   3e-44
tr|Q9SXH1|Q9SXH1_PHYPA Ribulose bisphosphate carboxylase small c...   180   4e-44
tr|Q75WT7|Q75WT7_PHYPA Ribulose bisphosphate carboxylase small c...   180   4e-44
tr|A9T3X7|A9T3X7_PHYPA Ribulose bisphosphate carboxylase small c...   180   6e-44
tr|Q5I8Y4|Q5I8Y4_9FABA Ribulose bisphosphate carboxylase small c...   179   7e-44
tr|A9PI67|A9PI67_POPTR Ribulose bisphosphate carboxylase small c...   178   2e-43
tr|A9TT85|A9TT85_PHYPA Ribulose bisphosphate carboxylase small c...   177   3e-43
tr|A9NZM2|A9NZM2_PICSI Ribulose bisphosphate carboxylase small c...   177   4e-43
tr|Q3LFQ4|Q3LFQ4_PANGI Ribulose bisphosphate carboxylase small c...   176   6e-43
tr|Q9ZWG3|Q9ZWG3_9POAL Ribulose bisphosphate carboxylase small c...   176   1e-42
tr|A7Q6D7|A7Q6D7_VITVI Ribulose bisphosphate carboxylase small c...   175   1e-42
tr|Q67IU5|Q67IU5_ORYSJ Ribulose bisphosphate carboxylase small c...   175   2e-42
tr|B8AHT7|B8AHT7_ORYSI Putative uncharacterized protein OS=Oryza...   175   2e-42
tr|A3A381|A3A381_ORYSJ Ribulose bisphosphate carboxylase small c...   175   2e-42
tr|A0FIP7|A0FIP7_CAMSI Ribulose bisphosphate carboxylase small c...   175   2e-42
tr|Q9SAW7|Q9SAW7_TRITU Ribulose bisphosphate carboxylase small c...   174   2e-42
tr|Q9FEE4|Q9FEE4_WHEAT Ribulose bisphosphate carboxylase small c...   174   2e-42
tr|B4FSJ3|B4FSJ3_MAIZE Putative uncharacterized protein OS=Zea m...   174   2e-42
tr|Q9ZSS0|Q9ZSS0_9POAL Ribulose bisphosphate carboxylase small c...   174   4e-42
tr|Q9SAW5|Q9SAW5_WHEAT Ribulose bisphosphate carboxylase small c...   174   4e-42
tr|Q9S7N3|Q9S7N3_AEGLO Ribulose bisphosphate carboxylase small c...   174   4e-42
tr|Q9ZWH3|Q9ZWH3_9POAL Ribulose bisphosphate carboxylase small c...   173   5e-42
tr|Q9ZWH2|Q9ZWH2_AEGBI Ribulose bisphosphate carboxylase small c...   173   5e-42
tr|Q9ZWH0|Q9ZWH0_AEGTA Ribulose bisphosphate carboxylase small c...   173   5e-42
tr|Q9ZWG5|Q9ZWG5_9POAL Ribulose bisphosphate carboxylase small c...   173   5e-42
tr|Q9ZNV1|Q9ZNV1_AEGLO Ribulose bisphosphate carboxylase small c...   173   5e-42
tr|Q9SNZ6|Q9SNZ6_9POAL Ribulose bisphosphate carboxylase small c...   173   5e-42

>tr|Q43110|Q43110_PTEVI Ribulose bisphosphate carboxylase small
           chain OS=Pteris vittata GN=rbcS4 PE=3 SV=1
          Length = 174

 Score =  264 bits (674), Expect = 3e-69
 Identities = 120/140 (85%), Positives = 132/140 (94%)
 Frame = +1

Query: 151 VFAPKSPNPLAISNGRRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQVDFMVRKGWTP 330
           +FAPK  NPLAISNG R+SAMLVWKPYDNKKFETLSYLPPL+++QIAKQV++MVRKGWTP
Sbjct: 34  LFAPKCANPLAISNGSRISAMLVWKPYDNKKFETLSYLPPLTNDQIAKQVEYMVRKGWTP 93

Query: 331 CIEFDKIGSVYREHFHGSSYYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEAFIRV 510
           CIEFD IGSVYREHFHGS YYDGRYW+MWKLPMFGC D+ +VLREIAECAKEYP AFIRV
Sbjct: 94  CIEFDTIGSVYREHFHGSGYYDGRYWIMWKLPMFGCTDSGSVLREIAECAKEYPTAFIRV 153

Query: 511 LGFDAKRQVQVSGFLVQKPS 570
           LGFDAKRQVQV+GFLV+KPS
Sbjct: 154 LGFDAKRQVQVAGFLVKKPS 173


>tr|A9TCL7|A9TCL7_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_221004 PE=3 SV=1
          Length = 184

 Score =  184 bits (466), Expect = 4e-45
 Identities = 83/147 (56%), Positives = 107/147 (72%), Gaps = 3/147 (2%)
 Frame = +1

Query: 139 RPLPVFAPKSPNPLAISNGRRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQVDFMVRK 318
           +P  +F+ K+    A+ NG RV  M VW P    KFET SYLPPL+ +QIAKQVD+M+++
Sbjct: 38  KPATLFSSKTQKLGAVQNGSRVQCMQVWNPIGQPKFETFSYLPPLTDDQIAKQVDYMIQQ 97

Query: 319 GWTPCIEFDKIGSVYREHFHG---SSYYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEY 489
              PCIEFD +GSV R +F G   S YYDGRYW MWKLPMFGC D++ VLREI EC  ++
Sbjct: 98  NLIPCIEFDTVGSVSRTNFSGAGSSGYYDGRYWTMWKLPMFGCTDSSQVLREIQECKSQF 157

Query: 490 PEAFIRVLGFDAKRQVQVSGFLVQKPS 570
           P  ++RVLGFD+K+QVQ+ GFLV +P+
Sbjct: 158 PSCWVRVLGFDSKKQVQICGFLVSRPN 184


>tr|A9T3W5|A9T3W5_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_87740 PE=3 SV=1
          Length = 179

 Score =  182 bits (463), Expect = 9e-45
 Identities = 84/143 (58%), Positives = 105/143 (73%), Gaps = 3/143 (2%)
 Frame = +1

Query: 151 VFAPKSPNPLAISNGRRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQVDFMVRKGWTP 330
           +FA K+    ++ NG RV  M VW P    KFET SYLPPL+ +QIAKQVDFM+++   P
Sbjct: 37  LFASKARRLSSVHNGSRVQCMQVWNPIGQPKFETFSYLPPLTDDQIAKQVDFMIQQNLIP 96

Query: 331 CIEFDKIGSVYREHFHG---SSYYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEAF 501
           CIEFD +GSV R +F G   S YYDGRYW MWKLPMFGC D+A VLREI EC + +P  +
Sbjct: 97  CIEFDTVGSVSRTNFSGPGSSGYYDGRYWTMWKLPMFGCTDSAQVLREIQECKQSFPSCW 156

Query: 502 IRVLGFDAKRQVQVSGFLVQKPS 570
           +RVLGFD+K+QVQ+ GFLV +P+
Sbjct: 157 VRVLGFDSKKQVQICGFLVARPN 179


>tr|Q9SEB9|Q9SEB9_LACSA Ribulose bisphosphate carboxylase small
           chain OS=Lactuca sativa PE=2 SV=1
          Length = 181

 Score =  181 bits (458), Expect = 3e-44
 Identities = 79/128 (61%), Positives = 97/128 (75%), Gaps = 1/128 (0%)
 Frame = +1

Query: 187 SNGRRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQVDFMVRKGWTPCIEFD-KIGSVY 363
           SNG RV  M VW P   KK+ETLSYLPPLS E ++K++D+++R  W PC+EF+ + G VY
Sbjct: 50  SNGGRVQCMKVWPPIGLKKYETLSYLPPLSDEALSKEIDYLIRNKWVPCLEFELEHGFVY 109

Query: 364 REHFHGSSYYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEAFIRVLGFDAKRQVQV 543
           REH H   YYDGRYW MWKLPMFGC D+A V++E+ EC KEYP AFIRV+GFD+ RQVQ 
Sbjct: 110 REHHHSPGYYDGRYWTMWKLPMFGCTDSAQVMKEVGECKKEYPNAFIRVIGFDSVRQVQC 169

Query: 544 SGFLVQKP 567
             F+V KP
Sbjct: 170 ISFIVSKP 177


>tr|Q9SXH1|Q9SXH1_PHYPA Ribulose bisphosphate carboxylase small
           chain (Fragment) OS=Physcomitrella patens PE=2 SV=1
          Length = 214

 Score =  180 bits (457), Expect = 4e-44
 Identities = 81/143 (56%), Positives = 105/143 (73%), Gaps = 3/143 (2%)
 Frame = +1

Query: 151 VFAPKSPNPLAISNGRRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQVDFMVRKGWTP 330
           +F+ K+    ++ NG RV  M VW P    KFET SYLPPL+ +QIAKQVD+M+++   P
Sbjct: 72  LFSGKTQKLSSVQNGSRVQCMQVWNPIGQPKFETFSYLPPLTDDQIAKQVDYMIQQNLIP 131

Query: 331 CIEFDKIGSVYREHFHG---SSYYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEAF 501
           CIEFD +GSV R +F G   S YYDGRYW MWKLPMFGC D++ VLREI EC  ++P  +
Sbjct: 132 CIEFDTVGSVSRTNFSGAGSSGYYDGRYWTMWKLPMFGCTDSSQVLREIQECKSQFPSCW 191

Query: 502 IRVLGFDAKRQVQVSGFLVQKPS 570
           +RVLGFD+K+QVQ+ GFLV +P+
Sbjct: 192 VRVLGFDSKKQVQICGFLVSRPN 214


>tr|Q75WT7|Q75WT7_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens GN=PprbcS1
           PE=2 SV=1
          Length = 184

 Score =  180 bits (457), Expect = 4e-44
 Identities = 82/143 (57%), Positives = 103/143 (72%), Gaps = 3/143 (2%)
 Frame = +1

Query: 151 VFAPKSPNPLAISNGRRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQVDFMVRKGWTP 330
           +F  KS    ++ NG RV  M VW P    KFET SYLPPLS +QIA+QVD+M+++   P
Sbjct: 42  LFTSKSQQLSSVQNGSRVQCMQVWNPIGQPKFETFSYLPPLSDDQIARQVDYMIQQNLIP 101

Query: 331 CIEFDKIGSVYREHFHGSS---YYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEAF 501
           CIEFD +G+V R +F GS    YYDGRYW MWKLPMFGC D++ VLREI EC   YP  +
Sbjct: 102 CIEFDTVGAVSRTNFSGSGSSGYYDGRYWTMWKLPMFGCTDSSQVLREIQECKTSYPSCW 161

Query: 502 IRVLGFDAKRQVQVSGFLVQKPS 570
           +RVLGFD+K+QVQ+ GFLV +P+
Sbjct: 162 VRVLGFDSKKQVQICGFLVARPN 184


>tr|A9T3X7|A9T3X7_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_87752 PE=3 SV=1
          Length = 179

 Score =  180 bits (456), Expect = 6e-44
 Identities = 83/141 (58%), Positives = 103/141 (73%), Gaps = 3/141 (2%)
 Frame = +1

Query: 157 APKSPNPLAISNGRRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQVDFMVRKGWTPCI 336
           A K+    ++ NG RV  M VW P    KFET SYLPPL+ +QIAKQVDFM+++   PCI
Sbjct: 39  ASKARRLSSVHNGSRVQCMQVWNPIGQPKFETFSYLPPLTDDQIAKQVDFMIQQNLIPCI 98

Query: 337 EFDKIGSVYREHFHG---SSYYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEAFIR 507
           EFD +GSV R +F G   S YYDGRYW MWKLPMFGC D+A VLREI EC + +P  ++R
Sbjct: 99  EFDTVGSVSRTNFSGPGSSGYYDGRYWTMWKLPMFGCTDSAQVLREIQECKQSFPSCWVR 158

Query: 508 VLGFDAKRQVQVSGFLVQKPS 570
           VLGFD+K+QVQ+ GFLV +P+
Sbjct: 159 VLGFDSKKQVQICGFLVARPN 179


>tr|Q5I8Y4|Q5I8Y4_9FABA Ribulose bisphosphate carboxylase small
           chain OS=Ammopiptanthus mongolicus PE=2 SV=1
          Length = 174

 Score =  179 bits (455), Expect = 7e-44
 Identities = 83/148 (56%), Positives = 105/148 (70%), Gaps = 1/148 (0%)
 Frame = +1

Query: 127 SLVSRPLPVFAPKSPNPLAISNGRRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQVDF 306
           S+ S P+P         +A +NG RV  MLVW P   KKFETLSYLPPLS E + K+V++
Sbjct: 23  SMASFPVPRKVNSDITTIA-NNGGRVQCMLVWPPLGRKKFETLSYLPPLSIESLTKEVEY 81

Query: 307 MVRKGWTPCIEFD-KIGSVYREHFHGSSYYDGRYWVMWKLPMFGCQDAAAVLREIAECAK 483
           ++RKGW PC+EF+ + G VYRE+     YYDGRYW MWKLPMFGC DA+ V++E+ EC K
Sbjct: 82  LLRKGWVPCLEFELEHGFVYRENNRSPGYYDGRYWTMWKLPMFGCSDASQVMKELEECKK 141

Query: 484 EYPEAFIRVLGFDAKRQVQVSGFLVQKP 567
           EYP AF+R++GFD KRQVQ   F+  KP
Sbjct: 142 EYPTAFVRIIGFDNKRQVQCISFIAYKP 169


>tr|A9PI67|A9PI67_POPTR Ribulose bisphosphate carboxylase small
           chain OS=Populus trichocarpa PE=2 SV=1
          Length = 170

 Score =  178 bits (452), Expect = 2e-43
 Identities = 76/128 (59%), Positives = 95/128 (74%)
 Frame = +1

Query: 184 ISNGRRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQVDFMVRKGWTPCIEFDKIGSVY 363
           +SNG +   M  W P +NKKFE LSYLPPLS + IAK++D+M++KGW PC+EFD++GSV 
Sbjct: 41  VSNGSKTFCMKTWNPINNKKFEALSYLPPLSEDSIAKEIDYMMKKGWIPCLEFDEVGSVR 100

Query: 364 REHFHGSSYYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEAFIRVLGFDAKRQVQV 543
           REH     YYDGRYW +WKLPMFGC D++ VL EI EC K YP+A+IR L FD K Q Q 
Sbjct: 101 REHSRMPGYYDGRYWTLWKLPMFGCTDSSQVLEEIHECKKAYPDAYIRCLAFDNKHQGQC 160

Query: 544 SGFLVQKP 567
             F++QKP
Sbjct: 161 MAFVIQKP 168


>tr|A9TT85|A9TT85_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_225236 PE=3 SV=1
          Length = 183

 Score =  177 bits (450), Expect = 3e-43
 Identities = 79/143 (55%), Positives = 105/143 (73%), Gaps = 3/143 (2%)
 Frame = +1

Query: 151 VFAPKSPNPLAISNGRRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQVDFMVRKGWTP 330
           +F+ ++    ++ NG RV  M VW P    KFET SYLPPL+ ++IAKQVD+M+++   P
Sbjct: 41  LFSSQAQTLSSVQNGSRVQCMQVWNPIGQPKFETFSYLPPLTDDEIAKQVDYMIQQNLIP 100

Query: 331 CIEFDKIGSVYREHFHG---SSYYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEAF 501
           CIEFD +GSV R +F G   S YYDGRYW MWKLPMFGC D++ VLREI EC  ++P  +
Sbjct: 101 CIEFDTVGSVSRTNFSGAGSSGYYDGRYWTMWKLPMFGCTDSSQVLREIQECKTQFPSCW 160

Query: 502 IRVLGFDAKRQVQVSGFLVQKPS 570
           +RVLGFD+K+QVQ+ GFLV +P+
Sbjct: 161 VRVLGFDSKKQVQICGFLVSRPN 183