BP920826
Clone id YMU001_000142_B12
Library
Length 563
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000142_B12.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
CGGCAGGTTCAAGAGTGAAGATGGACACCAGGTGGAGTTACAACTGCTACTCAAGGAAGT
TTATGATGTAGCTGCAAGGCCAGAAACTATAAGCCAACAGAAGACTGGGACTTCGGGAGT
GATGGTACCATGTCCCCAATCCTATACAGCTTTGGTTGCCTGTAATCATGGTCTTCCAAG
GATGAGAGAGAAAGCACCAATACCTGTGGGCATAACATGACAATTTACCAACGCTTTAAC
ATCAAATACATCCACCTCCAAATCCCTTATAACTCCCAAACACCTCATCTTTGATTGGTT
TACAAGCTTTTTACGAAAACCTGAATTCTTCACCATGTTGAGTTCCAACTTTGATACACA
AGTTTGAGTGATAACACATACTTGTGCACCTCCATCAATATAAGTCTCTCTAATGCACTT
CCTCTTATGCCACGCATCCACAGTAGGACATATATCGGGTAGCTCATTCAAAGATAGGAC
TCTCAGAGACTCCCTAGCAGGGTCCTTCATAAGTTTGACTACGTACTTCCAGTTGAGTAC
CTGCAGGTAATATCTCAAGGGCG
■■Homology search results ■■ -
sp_hit_id Q12U25
Definition sp|Q12U25|SYA_METBU Alanyl-tRNA synthetase OS=Methanococcoides burtonii (strain DSM 6242)
Align length 67
Score (bit) 33.5
E-value 0.74
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP920826|Adiantum capillus-veneris mRNA, clone:
YMU001_000142_B12.
(563 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q12U25|SYA_METBU Alanyl-tRNA synthetase OS=Methanococcoides b... 33 0.74
sp|Q9V3Q6|M3K7_DROME Mitogen-activated protein kinase kinase kin... 30 8.2

>sp|Q12U25|SYA_METBU Alanyl-tRNA synthetase OS=Methanococcoides
burtonii (strain DSM 6242) GN=alaS PE=3 SV=1
Length = 923

Score = 33.5 bits (75), Expect = 0.74
Identities = 19/67 (28%), Positives = 33/67 (49%)
Frame = +2

Query: 5 RFKSEDGHQVELQLLLKEVYDVAARPETISQQKTGTSGVMVPCPQSYTALVACNHGLPRM 184
R E G ++ L+ ++ ++YD P IS+ GV V P ++ +LVA H
Sbjct: 435 RHYKESGEKMPLETII-DMYDSHGIPPEISKAVASDVGVEVDLPDNFYSLVADKHSQSEE 493

Query: 185 REKAPIP 205
+E+ +P
Sbjct: 494 KEEKVVP 500


>sp|Q9V3Q6|M3K7_DROME Mitogen-activated protein kinase kinase kinase
7 OS=Drosophila melanogaster GN=Tak1 PE=2 SV=1
Length = 678

Score = 30.0 bits (66), Expect = 8.2
Identities = 25/83 (30%), Positives = 41/83 (49%), Gaps = 1/83 (1%)
Frame = +2

Query: 32 VELQLLLKEVYD-VAARPETISQQKTGTSGVMVPCPQSYTALVACNHGLPRMREKAPIPV 208
V Q++ KE VAA+P+++S Q+ G + P T A N + +
Sbjct: 286 VNQQIVTKESDGTVAAQPDSLSSQE----GELSPSSTQLTPTTAANANVNA--------I 333

Query: 209 GIT*QFTNALTSNTSTSKSLITP 277
I+ T+++T NTS++ S ITP
Sbjct: 334 AISKTTTSSMTENTSSTSSDITP 356


tr_hit_id A5C062
Definition tr|A5C062|A5C062_VITVI Putative uncharacterized protein OS=Vitis vinifera
Align length 115
Score (bit) 45.1
E-value 0.003
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP920826|Adiantum capillus-veneris mRNA, clone:
YMU001_000142_B12.
(563 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A5C062|A5C062_VITVI Putative uncharacterized protein OS=Vitis... 45 0.003
tr|Q2R8K8|Q2R8K8_ORYSJ Putative uncharacterized protein OS=Oryza... 43 0.010
tr|A5AEN6|A5AEN6_VITVI Putative uncharacterized protein OS=Vitis... 43 0.010
tr|Q53KJ4|Q53KJ4_ORYSJ Transposable element protein, putative, R... 43 0.014
tr|Q8SB54|Q8SB54_ORYSJ Putative polyprotein OS=Oryza sativa subs... 42 0.018
tr|Q8S5F9|Q8S5F9_ORYSA Putative uncharacterized protein OSJNBb00... 42 0.018
tr|Q8LM79|Q8LM79_ORYSJ Putative uncharacterized protein OSJNAa00... 42 0.018
tr|Q33A54|Q33A54_ORYSJ Putative uncharacterized protein OS=Oryza... 42 0.018
tr|A5B066|A5B066_VITVI Putative uncharacterized protein OS=Vitis... 42 0.018
tr|A5CAV0|A5CAV0_VITVI Putative uncharacterized protein OS=Vitis... 42 0.030
tr|A5C5I1|A5C5I1_VITVI Putative uncharacterized protein OS=Vitis... 42 0.030
tr|A5BUI8|A5BUI8_VITVI Putative uncharacterized protein OS=Vitis... 41 0.039
tr|A5BD94|A5BD94_VITVI Putative uncharacterized protein OS=Vitis... 41 0.039
tr|Q8RVC8|Q8RVC8_ORYSJ Putative polyprotein OS=Oryza sativa subs... 41 0.051
tr|Q8LM20|Q8LM20_ORYSJ Putative uncharacterized protein OSJNAa00... 41 0.051
tr|Q7XRT2|Q7XRT2_ORYSJ OSJNBa0042F21.11 protein OS=Oryza sativa ... 41 0.051
tr|A5C3V8|A5C3V8_VITVI Putative uncharacterized protein OS=Vitis... 41 0.051
tr|Q8S6X7|Q8S6X7_ORYSA Putative polyprotein OS=Oryza sativa GN=O... 40 0.067
tr|Q8S6J2|Q8S6J2_ORYSA Putative uncharacterized protein OSJNBa00... 40 0.067
tr|Q7XG75|Q7XG75_ORYSJ Zinc knuckle family protein OS=Oryza sati... 40 0.067
tr|Q7G6M3|Q7G6M3_ORYSJ Putative uncharacterized protein OSJNBa00... 40 0.067
tr|A5BJ10|A5BJ10_VITVI Putative uncharacterized protein OS=Vitis... 40 0.088
tr|A5AFC7|A5AFC7_VITVI Putative uncharacterized protein OS=Vitis... 40 0.11
tr|A5AQG7|A5AQG7_VITVI Putative uncharacterized protein OS=Vitis... 39 0.15
tr|A7QK21|A7QK21_VITVI Chromosome chr16 scaffold_110, whole geno... 39 0.19
tr|A5B295|A5B295_VITVI Putative uncharacterized protein OS=Vitis... 39 0.19
tr|A8NJA7|A8NJA7_COPC7 Predicted protein OS=Coprinopsis cinerea ... 39 0.19
tr|A8N8J9|A8N8J9_COPC7 Putative uncharacterized protein OS=Copri... 39 0.19
tr|A5C3F3|A5C3F3_VITVI Putative uncharacterized protein OS=Vitis... 39 0.25
tr|A5B6C4|A5B6C4_VITVI Putative uncharacterized protein OS=Vitis... 39 0.25

>tr|A5C062|A5C062_VITVI Putative uncharacterized protein OS=Vitis
vinifera GN=VITISV_029494 PE=4 SV=1
Length = 1720

Score = 45.1 bits (105), Expect = 0.003
Identities = 31/115 (26%), Positives = 56/115 (48%), Gaps = 5/115 (4%)
Frame = -3

Query: 450 CPTVDAWHKRKCIRETYIDGGAQVCVITQTCVSKLELNMVKNSGFRKKLVNQSKMRCLGV 271
CPT+ C+ + +D GA V ++ + +L L +K + L N+S +G+
Sbjct: 638 CPTISVNIGGTCVEKALLDLGASVNLLPYSVYKQLGLRRLKPTSITLSLANRSVKIPMGI 697

Query: 270 IRD--LEVDVFDVK---ALVNCHVMPTGIGAFSLILGRP*LQATKAV*DWGHGTI 121
I D ++VD F +++ + TG S+ILGRP L + A+ + +G +
Sbjct: 698 IEDVLVQVDKFYYSVDFVVLDTDPVVTGTNYVSIILGRPFLATSNAIINCRNGVM 752


>tr|Q2R8K8|Q2R8K8_ORYSJ Putative uncharacterized protein OS=Oryza
sativa subsp. japonica GN=LOC_Os11g11840 PE=4 SV=1
Length = 491

Score = 43.1 bits (100), Expect = 0.010
Identities = 39/135 (28%), Positives = 58/135 (42%), Gaps = 1/135 (0%)
Frame = -3

Query: 522 VVKLMKDPARESLRVLSLNELPDICPTVDAWHKRKCIRETYIDGGAQVCVITQTCVSKLE 343
VVKL + + L L + CPT+ + + + D GA V V+ + KL
Sbjct: 255 VVKLTEHYSNIILHKLPEKKKDPGCPTITCSIEAQQFDQALCDLGASVSVMPKDVFDKLN 314

Query: 342 LNMVKNSGFRKKLVNQSKMRCLGVIRDLEVDVFDVKALVNCHVMPTGIGAFS-LILGRP* 166
++ + R +L N S G+ D+ V + D V+ V+ G LILGRP
Sbjct: 315 FTVLTPTPMRLQLANSSVRYPAGIAEDVPVKIRDFFIPVDFVVLDMDTGKEKPLILGRPF 374

Query: 165 LQATKAV*DWGHGTI 121
L A D G G+I
Sbjct: 375 LSTVGANIDVGTGSI 389


>tr|A5AEN6|A5AEN6_VITVI Putative uncharacterized protein OS=Vitis
vinifera GN=VITISV_018029 PE=4 SV=1
Length = 1704

Score = 43.1 bits (100), Expect = 0.010
Identities = 32/115 (27%), Positives = 54/115 (46%), Gaps = 5/115 (4%)
Frame = -3

Query: 450 CPTVDAWHKRKCIRETYIDGGAQVCVITQTCVSKLELNMVKNSGFRKKLVNQSKMRCLGV 271
CPT+ C+ + +D GA V ++ + +L L +K + LV++S G+
Sbjct: 344 CPTISVSIGGTCVEKALLDMGASVNLLPYSVYKQLGLGELKPTSITLSLVDRSVKIPRGM 403

Query: 270 IRDLEVDVFDVKALVNCHVMPT-----GIGAFSLILGRP*LQATKAV*DWGHGTI 121
I D+ V V VN V+ T G +ILGRP L + A+ ++ +G +
Sbjct: 404 IXDVWVQVDKFYYPVNFVVLDTDSVVKGTNYVPIILGRPFLATSNAIINFRNGVM 458


>tr|Q53KJ4|Q53KJ4_ORYSJ Transposable element protein, putative,
Retrotrans_gag OS=Oryza sativa subsp. japonica
GN=LOC_Os11g26000 PE=4 SV=1
Length = 689

Score = 42.7 bits (99), Expect = 0.014
Identities = 38/135 (28%), Positives = 60/135 (44%), Gaps = 1/135 (0%)
Frame = -3

Query: 522 VVKLMKDPARESLRVLSLNELPDICPTVDAWHKRKCIRETYIDGGAQVCVITQTCVSKLE 343
VVKL + + L L + CPT+ + + + D GA V V+ + KL+
Sbjct: 437 VVKLTEQCSNVILHKLPEKKKYPGCPTITCSIRAQQFDQALCDLGASVSVMPKDVFDKLK 496

Query: 342 LNMVKNSGFRKKLVNQSKMRCLGVIRDLEVDVFDVKALVNCHVMPTGIGAFS-LILGRP* 166
++ + R +L + S G+ D+ V + D V+ V+ G + LILGRP
Sbjct: 497 FTVLAPTPMRLQLADSSVRYPAGIAEDVPVKIRDFFTPVDFVVLDMDTGKETPLILGRPF 556

Query: 165 LQATKAV*DWGHGTI 121
L A D G G+I
Sbjct: 557 LSTGGANIDMGTGSI 571


>tr|Q8SB54|Q8SB54_ORYSJ Putative polyprotein OS=Oryza sativa subsp.
japonica GN=OSJNBb0091O09.5 PE=4 SV=1
Length = 702

Score = 42.4 bits (98), Expect = 0.018
Identities = 43/151 (28%), Positives = 63/151 (41%), Gaps = 7/151 (4%)
Frame = -3

Query: 555 RYYLQVLNWKY------VVKLMKDPARESLRVLSLNELPDICPTVDAWHKRKCIRETYID 394
RY +LN K VVKLM+ L L + CPT+ + + D
Sbjct: 127 RYLKDILNNKRPLPTMEVVKLMEQCNNIILHKLPEKKKDPRCPTITCSIGAQQFDQALCD 186

Query: 393 GGAQVCVITQTCVSKLELNMVKNSGFRKKLVNQSKMRCLGVIRDLEVDVFDVKALVNCHV 214
GA V V+ + KL ++ + R +L + S G+ D+ V + D V+ V
Sbjct: 187 LGANVSVMPKDVFDKLNFTVLAPTPMRLQLADSSVRYPAGIAEDVPVKIRDFFIPVDFVV 246

Query: 213 MPTGIGAFS-LILGRP*LQATKAV*DWGHGT 124
+ G + LILGRP L A D G G+
Sbjct: 247 LDMDTGKETLLILGRPFLSTAGANIDVGMGS 277


>tr|Q8S5F9|Q8S5F9_ORYSA Putative uncharacterized protein
OSJNBb0047B19.5 OS=Oryza sativa GN=OSJNBb0047B19.5 PE=4
SV=1
Length = 276

Score = 42.4 bits (98), Expect = 0.018
Identities = 42/151 (27%), Positives = 66/151 (43%), Gaps = 6/151 (3%)
Frame = -3

Query: 555 RYYLQVLNWKYVVKLMKDPARESLRVLSLNELPDI-----CPTVDAWHKRKCIRETYIDG 391
RY +LN K + P E + L++LP+ CPT+ + + D
Sbjct: 106 RYLKDILNNKRPL-----PTTEHCSNVILHKLPEKKKDPRCPTITCSIGAQQFDQALCDL 160

Query: 390 GAQVCVITQTCVSKLELNMVKNSGFRKKLVNQSKMRCLGVIRDLEVDVFDVKALVNCHVM 211
GA V V+ + KL ++ + R +L + S +G+ D+ V ++D V+ V+
Sbjct: 161 GASVSVMPKDVFDKLNFTVLAPTPMRLQLADSSVHCPVGIEEDVPVKIWDFFIPVDFVVL 220

Query: 210 PTGIGA-FSLILGRP*LQATKAV*DWGHGTI 121
G SLILG P L A D G G+I
Sbjct: 221 DMDTGKETSLILGHPFLSTAGANIDVGMGSI 251


>tr|Q8LM79|Q8LM79_ORYSJ Putative uncharacterized protein
OSJNAa0082N11.11 OS=Oryza sativa subsp. japonica
GN=OSJNAa0082N11.11 PE=4 SV=1
Length = 322

Score = 42.4 bits (98), Expect = 0.018
Identities = 42/151 (27%), Positives = 66/151 (43%), Gaps = 6/151 (3%)
Frame = -3

Query: 555 RYYLQVLNWKYVVKLMKDPARESLRVLSLNELPDI-----CPTVDAWHKRKCIRETYIDG 391
RY +LN K + P E + L++LP+ CPT+ + + D
Sbjct: 152 RYLKDILNNKRPL-----PTTEHCSNVILHKLPEKKKDPRCPTITCSIGAQQFDQALCDL 206

Query: 390 GAQVCVITQTCVSKLELNMVKNSGFRKKLVNQSKMRCLGVIRDLEVDVFDVKALVNCHVM 211
GA V V+ + KL ++ + R +L + S +G+ D+ V ++D V+ V+
Sbjct: 207 GASVSVMPKDVFDKLNFTVLAPTPMRLQLADSSVHCPVGIEEDVPVKIWDFFIPVDFVVL 266

Query: 210 PTGIGA-FSLILGRP*LQATKAV*DWGHGTI 121
G SLILG P L A D G G+I
Sbjct: 267 DMDTGKETSLILGHPFLSTAGANIDVGMGSI 297


>tr|Q33A54|Q33A54_ORYSJ Putative uncharacterized protein OS=Oryza
sativa subsp. japonica GN=LOC_Os10g15190 PE=4 SV=2
Length = 317

Score = 42.4 bits (98), Expect = 0.018
Identities = 42/151 (27%), Positives = 66/151 (43%), Gaps = 6/151 (3%)
Frame = -3

Query: 555 RYYLQVLNWKYVVKLMKDPARESLRVLSLNELPDI-----CPTVDAWHKRKCIRETYIDG 391
RY +LN K + P E + L++LP+ CPT+ + + D
Sbjct: 147 RYLKDILNNKRPL-----PTTEHCSNVILHKLPEKKKDPRCPTITCSIGAQQFDQALCDL 201

Query: 390 GAQVCVITQTCVSKLELNMVKNSGFRKKLVNQSKMRCLGVIRDLEVDVFDVKALVNCHVM 211
GA V V+ + KL ++ + R +L + S +G+ D+ V ++D V+ V+
Sbjct: 202 GASVSVMPKDVFDKLNFTVLAPTPMRLQLADSSVHCPVGIEEDVPVKIWDFFIPVDFVVL 261

Query: 210 PTGIGA-FSLILGRP*LQATKAV*DWGHGTI 121
G SLILG P L A D G G+I
Sbjct: 262 DMDTGKETSLILGHPFLSTAGANIDVGMGSI 292


>tr|A5B066|A5B066_VITVI Putative uncharacterized protein OS=Vitis
vinifera GN=VITISV_013957 PE=4 SV=1
Length = 1229

Score = 42.4 bits (98), Expect = 0.018
Identities = 31/107 (28%), Positives = 50/107 (46%), Gaps = 5/107 (4%)
Frame = -3

Query: 450 CPTVDAWHKRKCIRETYIDGGAQVCVITQTCVSKLELNMVKNSGFRKKLVNQSKMRCLGV 271
CPT+ + K + + +D GA V ++ + +L L +K + L ++S GV
Sbjct: 177 CPTISVMIEGKVVEKALLDLGASVNLLPYSVYKQLGLGELKPTSITLSLADRSVKIPRGV 236

Query: 270 IRDLEVDVFDVKALVNCHVMPTG-----IGAFSLILGRP*LQATKAV 145
I D+ V V + LVN V+ T +ILGRP L + A+
Sbjct: 237 IEDVLVQVDNFYYLVNFVVLDTDPIVKEANFVPIILGRPFLATSNAI 283


>tr|A5CAV0|A5CAV0_VITVI Putative uncharacterized protein OS=Vitis
vinifera GN=VITISV_008437 PE=4 SV=1
Length = 866

Score = 41.6 bits (96), Expect = 0.030
Identities = 30/115 (26%), Positives = 53/115 (46%), Gaps = 5/115 (4%)
Frame = -3

Query: 450 CPTVDAWHKRKCIRETYIDGGAQVCVITQTCVSKLELNMVKNSGFRKKLVNQSKMRCLGV 271
CPT+ C+ + +D GA + ++ + +L L +K + L ++S G+
Sbjct: 509 CPTILVMIGETCVEKAXLDLGASLNLLPYSVYKQLGLGELKPTSITLSLADRSAKIPRGM 568

Query: 270 IRDLEVDVFDVKALVNCHVMPT-----GIGAFSLILGRP*LQATKAV*DWGHGTI 121
I D+ V V LV+ V+ T G +ILGRP L + A+ + +G +
Sbjct: 569 IEDVLVQVDKFYYLVDFVVLDTBXVAKGTNCIPIILGRPFLATSNAIINCRNGVM 623