BP920831 |
Clone id |
YMU001_000142_C05 |
Library |
YMU01 |
Length |
511 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000142_C05. |
Accession |
BP920831 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL1923Contig1 |
Sequence |
CTTCACCGTCACTGCAGACATCAAAGGATCAATGCAAGCCCTCCAATGCAAAAGTTCAGA GACTGTCCACTAAATTTCCAAGACTAGGTTGATGACCCAATCAGAAGATCAAAAACGTCA TCTGGAGTAAGAAAACTTGTTCCTCCTAAAACAATGTCAGCATCATCTTCCATCTTGTAG ATTGCTTGTGCTTCTTTAGCTTCACAAATCTCTACACCGTTAATACCCCCAATAACAAAC ACCATAATAAGTTTGTTGTCACTGAGCTTTGGTTTTACCTGCCTGAGTCCAAACCTTCCA AGACCACTCTTCAGTATCCGCCCCACAAAGGAAGCATGATGCTCCATCCCTGGTATTTCA GCTTTTGCAAAAAGCAACATAAGCACTTTAAAGATTAAGCTTCTCCGTGTAGATGAAGAT CCACCAAAGCCATCATAATCGTCAAAAACTGACGACTTATTTTTTGCCTGTAAAAATCGT CTTGCTTCTGAGACTCTGTGAAGCCTTCCAA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q8BTY8 |
Definition |
sp|Q8BTY8|SCFD2_MOUSE Sec1 family domain-containing protein 2 OS=Mus musculus |
Align length |
91 |
Score (bit) |
38.5 |
E-value |
0.016 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
B8LLT8 |
Definition |
tr|B8LLT8|B8LLT8_PICSI Putative uncharacterized protein OS=Picea sitchensis |
Align length |
137 |
Score (bit) |
139.0 |
E-value |
9.0e-32 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP920831|Adiantum capillus-veneris mRNA, clone: YMU001_000142_C05. (481 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|B8LLT8|B8LLT8_PICSI Putative uncharacterized protein OS=Picea... 139 9e-32 tr|A9PJ66|A9PJ66_POPJC Putative uncharacterized protein OS=Popul... 127 2e-28 tr|A7PJI5|A7PJI5_VITVI Chromosome chr12 scaffold_18, whole genom... 127 4e-28 tr|Q9SJI6|Q9SJI6_ARATH Putative uncharacterized protein At2g4270... 124 2e-27 tr|Q2RA23|Q2RA23_ORYSJ Expressed protein OS=Oryza sativa subsp. ... 115 8e-25 tr|A9TCH1|A9TCH1_PHYPA Predicted protein (Fragment) OS=Physcomit... 113 4e-24 tr|Q53JG6|Q53JG6_ORYSJ Putative uncharacterized protein OS=Oryza... 105 1e-21 tr|B8BJB1|B8BJB1_ORYSI Putative uncharacterized protein OS=Oryza... 105 1e-21 tr|B6PI10|B6PI10_BRAFL Putative uncharacterized protein OS=Branc... 58 2e-07 tr|Q4RKV3|Q4RKV3_TETNG Chromosome 1 SCAF15025, whole genome shot... 49 1e-04 tr|B3RNE7|B3RNE7_TRIAD Putative uncharacterized protein OS=Trich... 47 5e-04 tr|Q3UXF7|Q3UXF7_MOUSE Putative uncharacterized protein (Fragmen... 39 0.17 tr|Q3UPD0|Q3UPD0_MOUSE Putative uncharacterized protein OS=Mus m... 39 0.17 tr|A6MLC3|A6MLC3_CALJA Sec1 family domain containing protein 2-l... 39 0.17 tr|Q6LFD2|Q6LFD2_PLAF7 Putative syntaxin binding protein (Syntax... 39 0.17 tr|Q5U2R9|Q5U2R9_RAT Similar to Sec1 family domain containing pr... 38 0.22 tr|A6QPS9|A6QPS9_BOVIN SCFD2 protein OS=Bos taurus GN=SCFD2 PE=2... 38 0.22 tr|A0JN38|A0JN38_BOVIN Sec1 family domain containing 2 OS=Bos ta... 38 0.22 tr|B6KFG2|B6KFG2_TOXGO Syntaxin binding protein, putative OS=Tox... 37 0.64 tr|Q5ZIM9|Q5ZIM9_CHICK Putative uncharacterized protein OS=Gallu... 36 0.83 tr|Q7REF8|Q7REF8_PLAYO Syntaxin binding protein 1 OS=Plasmodium ... 36 0.83 tr|B3L7R7|B3L7R7_PLAKH Syntaxin binding protein, putative OS=Pla... 35 2.4 tr|A7SDD3|A7SDD3_NEMVE Predicted protein OS=Nematostella vectens... 35 2.4 tr|Q54ZW8|Q54ZW8_DICDI Sec1-like family protein OS=Dictyostelium... 34 3.2 tr|A2ES05|A2ES05_TRIVA Sec1 family protein OS=Trichomonas vagina... 34 3.2 tr|A5K1X6|A5K1X6_PLAVI Syntaxin binding protein, putative OS=Pla... 34 4.1 tr|Q53FW1|Q53FW1_HUMAN Syntaxin binding protein 3 variant (Fragm... 34 4.1 tr|A8K5K7|A8K5K7_HUMAN cDNA FLJ78083, highly similar to Homo sap... 34 4.1 tr|B3QVE1|B3QVE1_CHLT3 Transketolase domain protein OS=Chloroher... 33 5.4 tr|Q00VI7|Q00VI7_OSTTA Vesicle trafficking protein Sec1 (ISS) (F... 33 5.4
>tr|B8LLT8|B8LLT8_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 886
Score = 139 bits (349), Expect = 9e-32 Identities = 69/137 (50%), Positives = 100/137 (72%) Frame = -3
Query: 473 LHRVSEARRFLQAKNKSSVFDDYDGFGGSSSTRRSLIFKVLMLLFAKAEIPGMEHHASFV 294 LH+VS+ARR L K++ S ++ +S T R LI K+L ++FAK +IPG+E+H+S + Sbjct: 749 LHKVSDARRALLFKDRQSTLEEISN--ATSYTNRGLISKILSMVFAKCDIPGLEYHSSAM 806
Query: 293 GRILKSGLGRFGLRQVKPKLSDNKLIMVFVIGGINGVEICEAKEAQAIYKMEDDADIVLG 114 GR+ KSG GRFGL Q KP+L D L+ VF++GGIN +E+ EA+EAQA D +++LG Sbjct: 807 GRLFKSGFGRFGLGQAKPRLGDQSLLFVFLVGGINALEVREAQEAQA-SAGADGVELLLG 865
Query: 113 GTSFLTPDDVFDLLIGS 63 GT+ LTP+D+F+LL+GS Sbjct: 866 GTTILTPNDMFELLLGS 882
>tr|A9PJ66|A9PJ66_POPJC Putative uncharacterized protein OS=Populus jackii PE=2 SV=1 Length = 517
Score = 127 bits (320), Expect = 2e-28 Identities = 63/139 (45%), Positives = 92/139 (66%) Frame = -3
Query: 473 LHRVSEARRFLQAKNKSSVFDDYDGFGGSSSTRRSLIFKVLMLLFAKAEIPGMEHHASFV 294 LH++S +R + + F F G S + RSLI+K+L + K ++PG+E+H++ V Sbjct: 380 LHKLSTVKRNVSLRE--GTFSSESNFTGDSDSNRSLIYKLLTRVLRKNDVPGLEYHSTTV 437
Query: 293 GRILKSGLGRFGLRQVKPKLSDNKLIMVFVIGGINGVEICEAKEAQAIYKMEDDADIVLG 114 GR+ KSG GRFGL Q KP L+D +IMVFV+GGIN E+ E +EA + D +++LG Sbjct: 438 GRLFKSGFGRFGLGQTKPSLADQNIIMVFVVGGINAAEVREVQEALS-ESGRPDVELILG 496
Query: 113 GTSFLTPDDVFDLLIGSST 57 GT+FLTPDD+ LL+G S+ Sbjct: 497 GTTFLTPDDMLTLLMGDSS 515
>tr|A7PJI5|A7PJI5_VITVI Chromosome chr12 scaffold_18, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00018753001 PE=4 SV=1 Length = 817
Score = 127 bits (318), Expect = 4e-28 Identities = 64/139 (46%), Positives = 96/139 (69%) Frame = -3
Query: 473 LHRVSEARRFLQAKNKSSVFDDYDGFGGSSSTRRSLIFKVLMLLFAKAEIPGMEHHASFV 294 LH++S +R + + D D F G ST + L++K+L + K E+PG+++H+S V Sbjct: 679 LHKLSSLKRRNIPLREGPLALDND-FSGDPSTSKGLLYKLLTRVLGKYEVPGLDYHSSTV 737
Query: 293 GRILKSGLGRFGLRQVKPKLSDNKLIMVFVIGGINGVEICEAKEAQAIYKMEDDADIVLG 114 GR+ KSG GRFGL Q KP L+D +I+VFVIGGING+E+ EA+EA + D ++++G Sbjct: 738 GRLFKSGFGRFGLGQAKPSLADQNVILVFVIGGINGLEVREAQEALS-ESGRPDIELIIG 796
Query: 113 GTSFLTPDDVFDLLIGSST 57 GT+ LTPDD+ DLL+G+S+ Sbjct: 797 GTTLLTPDDMLDLLLGNSS 815
>tr|Q9SJI6|Q9SJI6_ARATH Putative uncharacterized protein At2g42700 OS=Arabidopsis thaliana GN=At2g42700 PE=2 SV=1 Length = 788
Score = 124 bits (311), Expect = 2e-27 Identities = 62/136 (45%), Positives = 93/136 (68%) Frame = -3
Query: 473 LHRVSEARRFLQAKNKSSVFDDYDGFGGSSSTRRSLIFKVLMLLFAKAEIPGMEHHASFV 294 LH++S R + S+ + F G S + L+++++ + +K EIPG+E+H+S V Sbjct: 650 LHKLSSLRTRNLPLREGSLASE-SSFPGEPSGNKGLVYRLITKVLSKQEIPGLEYHSSTV 708
Query: 293 GRILKSGLGRFGLRQVKPKLSDNKLIMVFVIGGINGVEICEAKEAQAIYKMEDDADIVLG 114 GR +KSG GRFGL Q KP L+D +I+VFVIGGING+E+ EA+EA + D ++V+G Sbjct: 709 GRFIKSGFGRFGLGQAKPSLADQSVILVFVIGGINGIEVLEAQEAVS-ESGRPDINLVIG 767
Query: 113 GTSFLTPDDVFDLLIG 66 GT+ LTPDD+F+LL+G Sbjct: 768 GTTLLTPDDMFELLLG 783
>tr|Q2RA23|Q2RA23_ORYSJ Expressed protein OS=Oryza sativa subsp. japonica GN=Os11g0169100 PE=4 SV=1 Length = 862
Score = 115 bits (289), Expect = 8e-25 Identities = 52/108 (48%), Positives = 82/108 (75%) Frame = -3
Query: 380 TRRSLIFKVLMLLFAKAEIPGMEHHASFVGRILKSGLGRFGLRQVKPKLSDNKLIMVFVI 201 +R+ L++K+L+ + A+ +IPG+E+H+S VGR+ KSGLGRFGL Q KP D +++VFV+ Sbjct: 754 SRKGLLYKLLLAVLARYDIPGLEYHSSAVGRLFKSGLGRFGLGQSKPSFGDQSILIVFVV 813
Query: 200 GGINGVEICEAKEAQAIYKMEDDADIVLGGTSFLTPDDVFDLLIGSST 57 GGIN +E+ E +A + D +++LGGT+ LTPDD+F+L++GSS+ Sbjct: 814 GGINALEVREVMKAIS-DSSRPDVELILGGTTLLTPDDMFELMLGSSS 860
>tr|A9TCH1|A9TCH1_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_143481 PE=4 SV=1 Length = 757
Score = 113 bits (283), Expect = 4e-24 Identities = 64/139 (46%), Positives = 88/139 (63%), Gaps = 2/139 (1%) Frame = -3
Query: 473 LHRVSEARRFLQAKNKSSVFDDYDGFGGSSSTRRSLIFKVLMLLFAKAEIPGMEHHASFV 294 LH VS AR L +S+ + L+ +V L+FAKA++PG+ HH+S V Sbjct: 624 LHCVSRARARLPVALRSTEEQVFP---------TGLLQQVFSLIFAKADVPGLHHHSSSV 674
Query: 293 GRILKSGLGRFGLRQ--VKPKLSDNKLIMVFVIGGINGVEICEAKEAQAIYKMEDDADIV 120 G KSGLGRFGL Q +PKL D + I+VFV+GGI+G EI E KEAQ + + +++ Sbjct: 675 GNFFKSGLGRFGLGQRLQQPKLGDYRTIIVFVVGGISGSEIREIKEAQMGHPGSESVEVL 734
Query: 119 LGGTSFLTPDDVFDLLIGS 63 +GGT+FLTP D+ DLL+GS Sbjct: 735 MGGTTFLTPSDMRDLLLGS 753
>tr|Q53JG6|Q53JG6_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=LOC_Os11g06810 PE=4 SV=1 Length = 958
Score = 105 bits (262), Expect = 1e-21 Identities = 53/130 (40%), Positives = 84/130 (64%), Gaps = 22/130 (16%) Frame = -3
Query: 380 TRRSLIFKVLMLLFAKAEIPGMEHHASFVGRILKSGLGRFGLRQVKPKLSDNKLIMVFVI 201 +R+ L++K+L+ + A+ +IPG+E+H+S VGR+ KSGLGRFGL Q KP D +++VFV+ Sbjct: 754 SRKGLLYKLLLAVLARYDIPGLEYHSSAVGRLFKSGLGRFGLGQSKPSFGDQSILIVFVV 813
Query: 200 GGINGVEICEAKEA-----------QAIYKMED-----------DADIVLGGTSFLTPDD 87 GGIN +E C A + Y++ + D +++LGGT+ LTPDD Sbjct: 814 GGINALE-CTGSVALSEPSVGTRFLSSKYQVREVMKAISDSSRPDVELILGGTTLLTPDD 872
Query: 86 VFDLLIGSST 57 +F+L++GSS+ Sbjct: 873 MFELMLGSSS 882
>tr|B8BJB1|B8BJB1_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_35262 PE=4 SV=1 Length = 884
Score = 105 bits (262), Expect = 1e-21 Identities = 53/130 (40%), Positives = 84/130 (64%), Gaps = 22/130 (16%) Frame = -3
Query: 380 TRRSLIFKVLMLLFAKAEIPGMEHHASFVGRILKSGLGRFGLRQVKPKLSDNKLIMVFVI 201 +R+ L++K+L+ + A+ +IPG+E+H+S VGR+ KSGLGRFGL Q KP D +++VFV+ Sbjct: 754 SRKGLLYKLLLAVLARYDIPGLEYHSSAVGRLFKSGLGRFGLGQSKPSFGDQSILIVFVV 813
Query: 200 GGINGVEICEAKEA-----------QAIYKMED-----------DADIVLGGTSFLTPDD 87 GGIN +E C A + Y++ + D +++LGGT+ LTPDD Sbjct: 814 GGINALE-CTGSVALSEPSVGTRFLSSKYQVREVMKAISDSSRPDVELILGGTTLLTPDD 872
Query: 86 VFDLLIGSST 57 +F+L++GSS+ Sbjct: 873 MFELMLGSSS 882
>tr|B6PI10|B6PI10_BRAFL Putative uncharacterized protein OS=Branchiostoma floridae GN=BRAFLDRAFT_131646 PE=4 SV=1 Length = 700
Score = 58.2 bits (139), Expect = 2e-07 Identities = 37/99 (37%), Positives = 59/99 (59%), Gaps = 2/99 (2%) Frame = -3
Query: 374 RSLIFKVLMLLFA--KAEIPGMEHHASFVGRILKSGLGRFGLRQVKPKLSDNKLIMVFVI 201 R L+ +++ +F K +IP +EH +S + +LKSG F + KP+ SD+ L+MV+V+ Sbjct: 589 RPLVRQLMEQIFHPDKPDIPDIEHLSSGLTDLLKSGFRMF-MSVSKPRPSDHALLMVYVV 647
Query: 200 GGINGVEICEAKEAQAIYKMEDDADIVLGGTSFLTPDDV 84 GG+ E+ +EA A K E ++V+G T L P DV Sbjct: 648 GGVTCQEVRLIREAVAAAKTE--TEVVVGSTRLLKPSDV 684
>tr|Q4RKV3|Q4RKV3_TETNG Chromosome 1 SCAF15025, whole genome shotgun sequence. (Fragment) OS=Tetraodon nigroviridis GN=GSTENG00032775001 PE=4 SV=1 Length = 228
Score = 48.9 bits (115), Expect = 1e-04 Identities = 38/139 (27%), Positives = 72/139 (51%), Gaps = 2/139 (1%) Frame = -3
Query: 473 LHRVSEARRFLQAKNKSSVFDDYDGFGGSSSTRRSLIFKVLMLLFA--KAEIPGMEHHAS 300 L +S+ R L K SV+ DG +T R + +V+ +F + + P +E+ + Sbjct: 88 LQGLSQTRDHL--KQLRSVYTASDGV--HQATYRPFLRQVVEEVFHPDRPDCPDIEYMSG 143
Query: 299 FVGRILKSGLGRFGLRQVKPKLSDNKLIMVFVIGGINGVEICEAKEAQAIYKMEDDADIV 120 + +LK+G F ++ +P DN L++VF++GG+ E+ KEA + +K + ++ Sbjct: 144 GLTDLLKTGFSMF-MKVTRPHPGDNPLLIVFLVGGVTASELRLIKEAVSTHK--PGSQVL 200
Query: 119 LGGTSFLTPDDVFDLLIGS 63 + T L P D+ +LL + Sbjct: 201 VLSTRLLRPADIAELLFAT 219
|