BP920839
Clone id YMU001_000142_D01
Library
Length 515
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000142_D01.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
TGTACTTTCAAAGAATCATTCATTTTCCTATTTCCTTATTGCATTTCTTGGGAAAAAAAT
AAGGAATTTTGAGATTTTACACTCTAGTGCCATTCCGCATAGGAACGGTAGTCAACGACA
GCTGGGCATGGCTGGACAAGAATATTTACAAGGCTTTTACAGGCCTAGAGGTCAGTCAAG
AACCAGCCACCCAATCAGGCACTCTCCTCAACAAATCTACATCTGAGTCATTTCTAGATC
CCAAAGGCGTCACCGACACAAAAGCATCTTGCAAAGCTCCAAAATCGTAGGAATCATCCT
CTTCTCTGACCATTTCTGCAACCTCCATTCGAAAATGTTGTTTGTTTCTGGTAGCGGGGA
CATGAGAACCATTTGTAGGACCTGTCACCGATTCAACTTCTACATTCTTCAATGAGGAAT
TTGCTCTGCGAGCTGCAGTCACAGCAGATGCAGCTAATCCAAGTTCAGCCACACGGACGC
CTATCGCATTTTGTTTACATGATCCCATCCCAAAT
■■Homology search results ■■ -
sp_hit_id Q8F9U1
Definition sp|Q8F9U1|Y098_LEPIN Uncharacterized RNA methyltransferase LA_0098 OS=Leptospira interrogans
Align length 60
Score (bit) 35.0
E-value 0.21
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP920839|Adiantum capillus-veneris mRNA, clone:
YMU001_000142_D01.
(515 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q8F9U1|Y098_LEPIN Uncharacterized RNA methyltransferase LA_00... 35 0.21
sp|Q72W54|Y086_LEPIC Uncharacterized RNA methyltransferase LIC_1... 35 0.21
sp|Q9UTA7|YL8B_SCHPO Uncharacterized transcriptional regulatory ... 32 1.8
sp|Q91661|GLI4_XENLA Zinc finger protein GLI4 OS=Xenopus laevis ... 32 1.8
sp|P44958|MVIN_HAEIN Virulence factor mviN homolog OS=Haemophilu... 31 3.0
sp|O02824|ADA1A_RABIT Alpha-1A adrenergic receptor OS=Oryctolagu... 30 6.7
sp|Q9WU25|ADA1A_CAVPO Alpha-1A adrenergic receptor OS=Cavia porc... 30 6.7
sp|P97718|ADA1A_MOUSE Alpha-1A adrenergic receptor OS=Mus muscul... 30 8.7

>sp|Q8F9U1|Y098_LEPIN Uncharacterized RNA methyltransferase LA_0098
OS=Leptospira interrogans GN=LA_0098 PE=3 SV=1
Length = 415

Score = 35.0 bits (79), Expect = 0.21
Identities = 24/60 (40%), Positives = 30/60 (50%), Gaps = 3/60 (5%)
Frame = +2

Query: 44 FLGKK---IRNFEILHSSAIPHRNGSQRQLGMAGQEYLQGFYRPRGQSRTSHPIRHSPQQ 214
FL KK I EIL +RN +Q QLG AG + L GFY SH I + P++
Sbjct: 119 FLSKKHIQIPEIEILSGDPNGYRNTAQIQLGFAGNQRLAGFY-----EEFSHSIVNLPEE 173


>sp|Q72W54|Y086_LEPIC Uncharacterized RNA methyltransferase
LIC_10086 OS=Leptospira interrogans serogroup
Icterohaemorrhagiae serovar copenhageni GN=LIC_10086
PE=3 SV=1
Length = 415

Score = 35.0 bits (79), Expect = 0.21
Identities = 24/60 (40%), Positives = 30/60 (50%), Gaps = 3/60 (5%)
Frame = +2

Query: 44 FLGKK---IRNFEILHSSAIPHRNGSQRQLGMAGQEYLQGFYRPRGQSRTSHPIRHSPQQ 214
FL KK I EIL +RN +Q QLG AG + L GFY SH I + P++
Sbjct: 119 FLSKKHIQIPEIEILSGDPNGYRNTAQIQLGFAGNQRLAGFY-----EEFSHSIVNLPEE 173


>sp|Q9UTA7|YL8B_SCHPO Uncharacterized transcriptional regulatory
protein C25B8.11 OS=Schizosaccharomyces pombe
GN=SPAC25B8.11 PE=2 SV=1
Length = 654

Score = 32.0 bits (71), Expect = 1.8
Identities = 22/63 (34%), Positives = 27/63 (42%), Gaps = 2/63 (3%)
Frame = -2

Query: 388 VTGPTNGSHV--PATRNKQHFRMEVAEMVREEDDSYDFGALQDAFVSVTPLGSRNDSDVD 215
V PT GS P R + EM DD +D L D+ LG DSD+D
Sbjct: 107 VISPTQGSDARGPDGRQVPLNLAGITEMYHTSDDKFDKLGLDDSLNYPYVLGPTCDSDID 166

Query: 214 LLR 206
L+R
Sbjct: 167 LIR 169


>sp|Q91661|GLI4_XENLA Zinc finger protein GLI4 OS=Xenopus laevis
GN=gli4 PE=2 SV=1
Length = 1361

Score = 32.0 bits (71), Expect = 1.8
Identities = 17/49 (34%), Positives = 23/49 (46%), Gaps = 11/49 (22%)
Frame = +2

Query: 95 PHRNG---SQRQLGMAGQEYLQGFYRPR--------GQSRTSHPIRHSP 208
P +NG Q LGM+GQ + G +PR + R HP+ H P
Sbjct: 1146 PQKNGLEPQQNTLGMSGQAFNHGMIQPRPPAAPHPPNRPRNIHPVHHPP 1194


>sp|P44958|MVIN_HAEIN Virulence factor mviN homolog OS=Haemophilus
influenzae GN=mviN PE=3 SV=1
Length = 510

Score = 31.2 bits (69), Expect = 3.0
Identities = 20/54 (37%), Positives = 28/54 (51%), Gaps = 9/54 (16%)
Frame = +3

Query: 45 FLGKK*GILRFYTLVPF--RIGTVVNDSWAWLDKNIYK-------AFTGLEVSQ 179
FLG G+L+F +PF + G +V WAW D+ + K A G+ VSQ
Sbjct: 189 FLG---GLLQFLFQIPFMKQAGLLVKPKWAWRDEGVTKIRKLMIPALFGVSVSQ 239


>sp|O02824|ADA1A_RABIT Alpha-1A adrenergic receptor OS=Oryctolagus
cuniculus GN=ADRA1A PE=2 SV=1
Length = 466

Score = 30.0 bits (66), Expect = 6.7
Identities = 17/63 (26%), Positives = 28/63 (44%), Gaps = 7/63 (11%)
Frame = -2

Query: 403 VEVESVTGPTNGSHVPATRNKQHFRMEVAEMVREEDDSYDFGALQDAFV-------SVTP 245
+ + P GS V + +NK HF + + + RE+ + G + FV V P
Sbjct: 234 LRIHRKNAPAGGSGVASAKNKTHFSVRLLKFSREKKAAKTLGIVVGCFVLCWLPFFLVMP 293

Query: 244 LGS 236
+GS
Sbjct: 294 IGS 296


>sp|Q9WU25|ADA1A_CAVPO Alpha-1A adrenergic receptor OS=Cavia
porcellus GN=ADRA1A PE=2 SV=2
Length = 466

Score = 30.0 bits (66), Expect = 6.7
Identities = 17/63 (26%), Positives = 29/63 (46%), Gaps = 7/63 (11%)
Frame = -2

Query: 403 VEVESVTGPTNGSHVPATRNKQHFRMEVAEMVREEDDSYDFGALQDAFV-------SVTP 245
+ + P GS V +++NK HF + + + RE+ + G + FV V P
Sbjct: 234 LRIHRKNAPLGGSGVASSKNKTHFSVRLLKFSREKKAAKTLGIVVGCFVLCWLPFFLVMP 293

Query: 244 LGS 236
+GS
Sbjct: 294 IGS 296


>sp|P97718|ADA1A_MOUSE Alpha-1A adrenergic receptor OS=Mus musculus
GN=Adra1a PE=1 SV=2
Length = 466

Score = 29.6 bits (65), Expect = 8.7
Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 7/55 (12%)
Frame = -2

Query: 379 PTNGSHVPATRNKQHFRMEVAEMVREEDDSYDFGALQDAFV-------SVTPLGS 236
P GS V + +NK HF + + + RE+ + G + FV V P+GS
Sbjct: 242 PAEGSGVSSAKNKTHFSVRLLKFSREKKAAKTLGIVVGCFVLCWLPFFLVMPIGS 296


tr_hit_id B8LK94
Definition tr|B8LK94|B8LK94_PICSI Putative uncharacterized protein OS=Picea sitchensis
Align length 109
Score (bit) 58.9
E-value 1.0e-07
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP920839|Adiantum capillus-veneris mRNA, clone:
YMU001_000142_D01.
(515 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|B8LK94|B8LK94_PICSI Putative uncharacterized protein OS=Picea... 59 1e-07
tr|A9SJL0|A9SJL0_PHYPA Predicted protein OS=Physcomitrella paten... 52 2e-05
tr|A7P6M1|A7P6M1_VITVI Chromosome chr9 scaffold_7, whole genome ... 46 0.001
tr|A9PCE4|A9PCE4_POPTR Putative uncharacterized protein OS=Popul... 44 0.004
tr|B6SLG3|B6SLG3_MAIZE Acid phosphatase OS=Zea mays PE=2 SV=1 44 0.005
tr|Q9SSN8|Q9SSN8_ARATH F3N23.8 protein OS=Arabidopsis thaliana G... 43 0.008
tr|Q84MD7|Q84MD7_ARATH At1g72880 (Putative uncharacterized prote... 43 0.008
tr|B4G027|B4G027_MAIZE Acid phosphatase OS=Zea mays PE=2 SV=1 43 0.011
tr|Q0JJY1|Q0JJY1_ORYSJ cDNA clone:J023046I03, full insert sequen... 40 0.068
tr|A2ZX36|A2ZX36_ORYSJ Putative uncharacterized protein OS=Oryza... 40 0.068
tr|A2WUB4|A2WUB4_ORYSI Putative uncharacterized protein OS=Oryza... 40 0.068
tr|Q8LAM2|Q8LAM2_ARATH Putative uncharacterized protein (At4g149... 37 0.75
tr|Q56WK2|Q56WK2_ARATH Putative uncharacterized protein At4g1493... 37 0.75
tr|A2EJ73|A2EJ73_TRIVA ABC transporter family protein OS=Trichom... 33 6.4
tr|A3WAY3|A3WAY3_9SPHN Glutathione S-transferase family protein ... 33 8.3
tr|B4IY51|B4IY51_DROGR GH16954 OS=Drosophila grimshawi GN=GH1695... 33 8.3

>tr|B8LK94|B8LK94_PICSI Putative uncharacterized protein OS=Picea
sitchensis PE=2 SV=1
Length = 394

Score = 58.9 bits (141), Expect = 1e-07
Identities = 34/109 (31%), Positives = 55/109 (50%), Gaps = 1/109 (0%)
Frame = -2

Query: 511 GMGSCKQNAIGVRVAELGLXXXXXXXXXXXXXSLKNVEVESVTGPTNGSHVPATRNKQHF 332
G K+ ++G+++A+L KN+EVESV G + K++F
Sbjct: 275 GQYMSKEQSLGIQLAQLSQAASAAGAARRLNLRRKNIEVESV-GEAGKQETQSVAVKKYF 333

Query: 331 RMEVAEMVREE-DDSYDFGALQDAFVSVTPLGSRNDSDVDLLRRVPDWV 188
R+E +E E DD D+GAL+ FV++TPLG ++ +D V W+
Sbjct: 334 RVEFSEHEHGEMDDDLDYGALEQGFVTITPLGLTCNAQLDTCTSVATWI 382


>tr|A9SJL0|A9SJL0_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_213060 PE=4 SV=1
Length = 114

Score = 52.0 bits (123), Expect = 2e-05
Identities = 35/110 (31%), Positives = 53/110 (48%), Gaps = 1/110 (0%)
Frame = -2

Query: 508 MGSCKQNAIGVRVAELGLXXXXXXXXXXXXXSLKNVEVESVTGPTNGSHVPATRNKQHFR 329
M K + IG+++++LGL +N +VESV P+ R + FR
Sbjct: 1 MQMLKDSGIGLQMSQLGLAASAAGAARRANFKKQNPDVESVGANEESDKEPSPRMR--FR 58

Query: 328 MEVAEM-VREEDDSYDFGALQDAFVSVTPLGSRNDSDVDLLRRVPDWVAG 182
+E AE + + +DFGALQ +VS+T LG + +V WVAG
Sbjct: 59 LEGAEQELGAIEPDHDFGALQQGYVSITALGLDTHVEATTRAQVEKWVAG 108


>tr|A7P6M1|A7P6M1_VITVI Chromosome chr9 scaffold_7, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00034123001
PE=4 SV=1
Length = 384

Score = 46.2 bits (108), Expect = 0.001
Identities = 28/103 (27%), Positives = 50/103 (48%), Gaps = 1/103 (0%)
Frame = -2

Query: 493 QNAIGVRVAELGLXXXXXXXXXXXXXSLKNVEVESVTGPTNGSHVPATRNKQHFRMEVAE 314
Q ++G+++A+L KNVE+ G + R K++FR+E +
Sbjct: 275 QQSLGIQLAQLSRDASAAGAARRLTTQRKNVEIVESVGVAGKTDF--NRVKKYFRLEFVD 332

Query: 313 MVREE-DDSYDFGALQDAFVSVTPLGSRNDSDVDLLRRVPDWV 188
+E D+ DF AL++ FV+VTPL ++ D+ +W+
Sbjct: 333 KEQEGLDEDLDFRALENGFVAVTPLSLSQHNESDIHTTASEWM 375


>tr|A9PCE4|A9PCE4_POPTR Putative uncharacterized protein OS=Populus
trichocarpa PE=2 SV=1
Length = 394

Score = 44.3 bits (103), Expect = 0.004
Identities = 30/107 (28%), Positives = 53/107 (49%), Gaps = 2/107 (1%)
Frame = -2

Query: 493 QNAIGVRVAELGLXXXXXXXXXXXXXSLKNV-EVESVTGPTNGSHVPATRNKQHFRMEVA 317
Q ++G+++A+L KN+ E+ESV G + R K++FRME
Sbjct: 286 QQSLGLQLAQLSRDASAAGAARRLTTQRKNMLEIESVGA---GGKSDSNRVKKYFRMEFL 342

Query: 316 EMVREE-DDSYDFGALQDAFVSVTPLGSRNDSDVDLLRRVPDWVAGS 179
+ E+ D+ DF A+++ FV++TPL + D DW++ +
Sbjct: 343 DKELEDTDEDLDFRAVENGFVAITPLSLSPRIEEDTHIAASDWISSA 389


>tr|B6SLG3|B6SLG3_MAIZE Acid phosphatase OS=Zea mays PE=2 SV=1
Length = 401

Score = 43.9 bits (102), Expect = 0.005
Identities = 31/104 (29%), Positives = 48/104 (46%), Gaps = 1/104 (0%)
Frame = -2

Query: 487 AIGVRVAELGLXXXXXXXXXXXXXSLKNVEVESVTGPTNGSHVPATRNKQHFRMEVAEMV 308
++G+++A+LG K VEVESV T G K+ FR E E
Sbjct: 280 SLGIQLAQLGKDASAAAAARRVSGQRKAVEVESVA--TAGKQETREVVKKLFRAEFVERQ 337

Query: 307 REE-DDSYDFGALQDAFVSVTPLGSRNDSDVDLLRRVPDWVAGS 179
+ D+ D AL++ FVSVTPL + ++ DW++ +
Sbjct: 338 HQGLDEDTDLRALENGFVSVTPLNVHGQVEPEIQAPASDWLSAA 381


>tr|Q9SSN8|Q9SSN8_ARATH F3N23.8 protein OS=Arabidopsis thaliana
GN=F3N23.8 PE=4 SV=1
Length = 359

Score = 43.1 bits (100), Expect = 0.008
Identities = 33/107 (30%), Positives = 52/107 (48%), Gaps = 4/107 (3%)
Frame = -2

Query: 493 QNAIGVRVAELGLXXXXXXXXXXXXXSLKN-VEVESV--TGPTNGSHVPATRNKQHFRME 323
Q ++G ++A+LG K+ VE+ESV G T+ TR K+ FR+E
Sbjct: 252 QQSLGAQLAQLGRDASAAGAARRFTTQKKSIVEIESVGVAGKTD------TRVKKFFRLE 305

Query: 322 -VAEMVREEDDSYDFGALQDAFVSVTPLGSRNDSDVDLLRRVPDWVA 185
+A+ D+ D AL+D FVSVTP +D + +W++
Sbjct: 306 FLAKEQEHTDEDLDVKALEDGFVSVTPFSLLPKTDSETQAAASEWIS 352


>tr|Q84MD7|Q84MD7_ARATH At1g72880 (Putative uncharacterized protein
At1g72880) OS=Arabidopsis thaliana GN=At1g72880 PE=2
SV=1
Length = 385

Score = 43.1 bits (100), Expect = 0.008
Identities = 33/107 (30%), Positives = 52/107 (48%), Gaps = 4/107 (3%)
Frame = -2

Query: 493 QNAIGVRVAELGLXXXXXXXXXXXXXSLKN-VEVESV--TGPTNGSHVPATRNKQHFRME 323
Q ++G ++A+LG K+ VE+ESV G T+ TR K+ FR+E
Sbjct: 278 QQSLGAQLAQLGRDASAAGAARRFTTQKKSIVEIESVGVAGKTD------TRVKKFFRLE 331

Query: 322 -VAEMVREEDDSYDFGALQDAFVSVTPLGSRNDSDVDLLRRVPDWVA 185
+A+ D+ D AL+D FVSVTP +D + +W++
Sbjct: 332 FLAKEQEHTDEDLDVKALEDGFVSVTPFSLLPKTDSETQAAASEWIS 378


>tr|B4G027|B4G027_MAIZE Acid phosphatase OS=Zea mays PE=2 SV=1
Length = 418

Score = 42.7 bits (99), Expect = 0.011
Identities = 30/112 (26%), Positives = 49/112 (43%), Gaps = 9/112 (8%)
Frame = -2

Query: 487 AIGVRVAELGLXXXXXXXXXXXXXSLKNVEVESVTGPTNGSHVPATRNKQHFRMEVAEMV 308
++G+++A+LG K VEVESV A KQ R V ++
Sbjct: 287 SLGIQLAQLGKDASAAGAARRVSAQRKAVEVESV----------AAAGKQEIREVVKKLF 336

Query: 307 REE---------DDSYDFGALQDAFVSVTPLGSRNDSDVDLLRRVPDWVAGS 179
R E D+ D AL++ F+SVTPL ++++ DW++ +
Sbjct: 337 RAEFVEKRYEGLDEDIDLRALENGFISVTPLNVHGQVELEIGATASDWLSAA 388


>tr|Q0JJY1|Q0JJY1_ORYSJ cDNA clone:J023046I03, full insert sequence
OS=Oryza sativa subsp. japonica GN=Os01g0709400 PE=2
SV=1
Length = 418

Score = 40.0 bits (92), Expect = 0.068
Identities = 32/104 (30%), Positives = 47/104 (45%), Gaps = 3/104 (2%)
Frame = -2

Query: 487 AIGVRVAELGLXXXXXXXXXXXXXSLKNVEVESV--TGPTNGSHVPATRNKQHFRMEVAE 314
++G+++A+LG K VEVESV TG V K+ FR E E
Sbjct: 285 SLGIQLAQLGKDASAAGAARRINAQRKIVEVESVASTGKAEAREVV----KKLFRAEFTE 340

Query: 313 MVRE-EDDSYDFGALQDAFVSVTPLGSRNDSDVDLLRRVPDWVA 185
E D+ D AL++ F+SVTPL + + DW++
Sbjct: 341 KQHECLDEDIDLRALENGFISVTPLNIHGNVAPETGAPASDWLS 384


>tr|A2ZX36|A2ZX36_ORYSJ Putative uncharacterized protein OS=Oryza
sativa subsp. japonica GN=OsJ_003108 PE=4 SV=1
Length = 447

Score = 40.0 bits (92), Expect = 0.068
Identities = 32/104 (30%), Positives = 47/104 (45%), Gaps = 3/104 (2%)
Frame = -2

Query: 487 AIGVRVAELGLXXXXXXXXXXXXXSLKNVEVESV--TGPTNGSHVPATRNKQHFRMEVAE 314
++G+++A+LG K VEVESV TG V K+ FR E E
Sbjct: 314 SLGIQLAQLGKDASAAGAARRINAQRKIVEVESVASTGKAEAREVV----KKLFRAEFTE 369

Query: 313 MVRE-EDDSYDFGALQDAFVSVTPLGSRNDSDVDLLRRVPDWVA 185
E D+ D AL++ F+SVTPL + + DW++
Sbjct: 370 KQHECLDEDIDLRALENGFISVTPLNIHGNVAPETGAPASDWLS 413