BP920844
Clone id YMU001_000142_D07
Library
Length 185
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000142_D07.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
GGAGTTCTGCCTCTAAGCTTCCTTTCCCCTCCGCAGGTATACTCTTGCTGTCCTCATTCA
TAGGCCGAAGGTTAGCTTGGACTGTGCTCCCACCTTTCTCTGGCTCTTGAACATCTTCCG
TATTGTGAATATTATCATTAGCTTGTTCATGGATGCTTTGCACCAAATCCAGAAATGCAG
ATGCA
■■Homology search results ■■ -
sp_hit_id Q09860
Definition sp|Q09860|SYCC_SCHPO Probable cysteinyl-tRNA synthetase, cytoplasmic OS=Schizosaccharomyces pombe
Align length 36
Score (bit) 29.6
E-value 4.8
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP920844|Adiantum capillus-veneris mRNA, clone:
YMU001_000142_D07.
(185 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q09860|SYCC_SCHPO Probable cysteinyl-tRNA synthetase, cytopla... 30 4.8
sp|Q9VHY5|TAF7_DROME Transcription initiation factor TFIID subun... 29 6.3

>sp|Q09860|SYCC_SCHPO Probable cysteinyl-tRNA synthetase,
cytoplasmic OS=Schizosaccharomyces pombe GN=SPAC29E6.06c
PE=2 SV=1
Length = 754

Score = 29.6 bits (65), Expect = 4.8
Identities = 16/36 (44%), Positives = 22/36 (61%)
Frame = -2

Query: 115 DVQEPEKGGSTVQANLRPMNEDSKSIPAEGKGSLEA 8
D + EKGG A L P N+ ++ + AEG+GSL A
Sbjct: 278 DTEAFEKGGH-FYAKLEPWNKGNRELIAEGEGSLAA 312


>sp|Q9VHY5|TAF7_DROME Transcription initiation factor TFIID subunit
7 OS=Drosophila melanogaster GN=Taf7 PE=1 SV=1
Length = 479

Score = 29.3 bits (64), Expect = 6.3
Identities = 12/38 (31%), Positives = 24/38 (63%)
Frame = -2

Query: 157 SIHEQANDNIHNTEDVQEPEKGGSTVQANLRPMNEDSK 44
++H+ + + +T+D EP++G +T+Q R M E S+
Sbjct: 290 AVHDIFGEEVSSTDDEDEPDRGNNTMQR--RVMEESSR 325


tr_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP920844|Adiantum capillus-veneris mRNA, clone:
YMU001_000142_D07.
(185 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done

***** No hits found ******