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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP920850
Clone id YMU001_000142_E02
Library
Length 502
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000142_E02.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
TTGAGATATTACCTGCAGGTACTCAAGATATACCGGTATTCTTTCAATAAGCTTAACAAA
ATCTCTTTTTCTTCTTCCGTCAGGTCGTTTGCAATGTAGGCAGGTCTAGGCTCCTCTCCT
GGTTCGGCCAGATCTATCTTTTTTGCGTTTTTAGGTTCTTTGTAGAACTCGCCCTGTTTT
CGTAGTTCCCTGACAAGTTGTTCGACTTTGATTTTTTGGTTTTGGAGAGTATATTTCTTG
TAATGAGATGCAACACTCATTACATCTTTATCTTCCTTCTTAGTGGTTTCCATTTCAGTT
GTATATATCTCCTTTTGAGCTTTTTTCAACTCTTGATACTTCTTCCTTCGTTCAACTCGT
GTCATGGTTGAATCCTTGTCCTAGTATTTAGGTTTTGCTTGAGTTTCCTTTCTCATTTTT
CTCAATGTTTTTGATATTTCTTGCTTTTAGTTTACAGGATATCTACCAATGATTTTGTCC
TTGACATAATCATGTGCATCTA
■■Homology search results ■■ -
sp_hit_id P54673
Definition sp|P54673|PI3K1_DICDI Phosphatidylinositol 3-kinase 1 OS=Dictyostelium discoideum
Align length 38
Score (bit) 32.7
E-value 0.98
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP920850|Adiantum capillus-veneris mRNA, clone:
YMU001_000142_E02.
         (502 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P54673|PI3K1_DICDI Phosphatidylinositol 3-kinase 1 OS=Dictyos...    33   0.98 
sp|Q0P3L9|RK2_OSTTA 50S ribosomal protein L2, chloroplastic OS=O...    32   1.3  
sp|P19836|PCY1A_RAT Choline-phosphate cytidylyltransferase A OS=...    30   4.8  
sp|P49586|PCY1A_MOUSE Choline-phosphate cytidylyltransferase A O...    30   4.8  
sp|P49585|PCY1A_HUMAN Choline-phosphate cytidylyltransferase A O...    30   4.8  
sp|Q9QZC4|PCY1B_RAT Choline-phosphate cytidylyltransferase B OS=...    30   8.2  
sp|Q811Q9|PCY1B_MOUSE Choline-phosphate cytidylyltransferase B O...    30   8.2  

>sp|P54673|PI3K1_DICDI Phosphatidylinositol 3-kinase 1
           OS=Dictyostelium discoideum GN=pikA PE=2 SV=2
          Length = 1571

 Score = 32.7 bits (73), Expect = 0.98
 Identities = 14/38 (36%), Positives = 24/38 (63%)
 Frame = -2

Query: 243 LQEIYSPKPKNQSRTTCQGTTKTGRVLQRT*KRKKDRS 130
           ++++ +PK  N S+ T   TT TG+  ++  K KKD+S
Sbjct: 358 VKKVSTPKSNNTSKKTSSDTTPTGKTTKKDKKDKKDKS 395


>sp|Q0P3L9|RK2_OSTTA 50S ribosomal protein L2, chloroplastic
           OS=Ostreococcus tauri GN=rpl2 PE=3 SV=1
          Length = 277

 Score = 32.3 bits (72), Expect = 1.3
 Identities = 20/48 (41%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
 Frame = -2

Query: 231 YSPKPKNQSRTTCQGTTKT--GRVLQRT*KRKKDRSGRTRRGA*TCLH 94
           Y+P  +N+S   C G TKT   + L R+  R K   GR  RG  TC H
Sbjct: 9   YTPGTRNRSVADCSGLTKTRPEKSLTRSMHRAK---GRNNRGVITCRH 53


>sp|P19836|PCY1A_RAT Choline-phosphate cytidylyltransferase A
           OS=Rattus norvegicus GN=Pcyt1a PE=1 SV=2
          Length = 367

 Score = 30.4 bits (67), Expect = 4.8
 Identities = 15/51 (29%), Positives = 29/51 (56%)
 Frame = -3

Query: 239 KKYTLQNQKIKVEQLVRELRKQGEFYKEPKNAKKIDLAEPGEEPRPAYIAN 87
           KKY LQ +  KV++ V+++ ++ + + +    K IDL +  EE    +I +
Sbjct: 238 KKYHLQERVDKVKKKVKDVEEKSKEFVQKVEEKSIDLIQKWEEKSREFIGS 288


>sp|P49586|PCY1A_MOUSE Choline-phosphate cytidylyltransferase A
           OS=Mus musculus GN=Pcyt1a PE=1 SV=1
          Length = 367

 Score = 30.4 bits (67), Expect = 4.8
 Identities = 15/51 (29%), Positives = 29/51 (56%)
 Frame = -3

Query: 239 KKYTLQNQKIKVEQLVRELRKQGEFYKEPKNAKKIDLAEPGEEPRPAYIAN 87
           KKY LQ +  KV++ V+++ ++ + + +    K IDL +  EE    +I +
Sbjct: 238 KKYHLQERVDKVKKKVKDVEEKSKEFVQKVEEKSIDLIQKWEEKSREFIGS 288


>sp|P49585|PCY1A_HUMAN Choline-phosphate cytidylyltransferase A
           OS=Homo sapiens GN=PCYT1A PE=1 SV=2
          Length = 367

 Score = 30.4 bits (67), Expect = 4.8
 Identities = 15/51 (29%), Positives = 29/51 (56%)
 Frame = -3

Query: 239 KKYTLQNQKIKVEQLVRELRKQGEFYKEPKNAKKIDLAEPGEEPRPAYIAN 87
           KKY LQ +  KV++ V+++ ++ + + +    K IDL +  EE    +I +
Sbjct: 238 KKYHLQERVDKVKKKVKDVEEKSKEFVQKVEEKSIDLIQKWEEKSREFIGS 288


>sp|Q9QZC4|PCY1B_RAT Choline-phosphate cytidylyltransferase B
           OS=Rattus norvegicus GN=Pcyt1b PE=2 SV=1
          Length = 369

 Score = 29.6 bits (65), Expect = 8.2
 Identities = 15/51 (29%), Positives = 26/51 (50%)
 Frame = -3

Query: 239 KKYTLQNQKIKVEQLVRELRKQGEFYKEPKNAKKIDLAEPGEEPRPAYIAN 87
           KKY  QNQ  K+++ V+ + ++ + +      K  DL +  EE    +I N
Sbjct: 238 KKYRFQNQVDKMKEKVKNVEERSKEFVNRVEEKSHDLIQKWEEKSREFIGN 288


>sp|Q811Q9|PCY1B_MOUSE Choline-phosphate cytidylyltransferase B
           OS=Mus musculus GN=Pcyt1b PE=1 SV=2
          Length = 369

 Score = 29.6 bits (65), Expect = 8.2
 Identities = 15/51 (29%), Positives = 26/51 (50%)
 Frame = -3

Query: 239 KKYTLQNQKIKVEQLVRELRKQGEFYKEPKNAKKIDLAEPGEEPRPAYIAN 87
           KKY  QNQ  K+++ V+ + ++ + +      K  DL +  EE    +I N
Sbjct: 238 KKYRFQNQVDKMKEKVKNVEERSKEFVNRVEEKSHDLIQKWEEKSREFIGN 288
tr_hit_id B4FZG3
Definition tr|B4FZG3|B4FZG3_MAIZE Putative uncharacterized protein OS=Zea mays
Align length 51
Score (bit) 37.7
E-value 0.3
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP920850|Adiantum capillus-veneris mRNA, clone:
YMU001_000142_E02.
         (502 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B4FZG3|B4FZG3_MAIZE Putative uncharacterized protein OS=Zea m...    38   0.30 
tr|B0P0W3|B0P0W3_9CLOT Putative uncharacterized protein OS=Clost...    35   2.6  
tr|A4JHB6|A4JHB6_BURVG Putative uncharacterized protein OS=Burkh...    34   3.3  
tr|Q6MWC6|Q6MWC6_ORYSJ B1292H11.5 protein OS=Oryza sativa subsp....    34   3.3  
tr|Q4SBJ4|Q4SBJ4_TETNG Chromosome 15 SCAF14667, whole genome sho...    33   5.7  
tr|Q735Z6|Q735Z6_BACC1 Conserved domain protein OS=Bacillus cere...    33   5.7  
tr|Q568K8|Q568K8_DANRE Zgc:110237 OS=Danio rerio GN=zgc:110237 P...    33   7.4  
tr|Q503Y3|Q503Y3_DANRE Zgc:110012 OS=Danio rerio GN=zgc:110012 P...    33   7.4  
tr|A8E7K4|A8E7K4_DANRE Novel protein similar to vertebrate phosp...    33   7.4  
tr|Q65WZ2|Q65WZ2_ORYSJ Putative polyprotein OS=Oryza sativa subs...    33   7.4  
tr|Q8T5C7|Q8T5C7_PLAFA Erythrocyte binding protein 1 (Chimeric e...    33   7.4  
tr|Q8IHP3|Q8IHP3_PLAF7 MAEBL, putative OS=Plasmodium falciparum ...    33   7.4  
tr|Q7K5Q6|Q7K5Q6_PLAFA Erythrocyte binding protein 3 OS=Plasmodi...    33   7.4  
tr|Q7K5Q5|Q7K5Q5_PLAFA Erythrocyte binding protein 2 OS=Plasmodi...    33   7.4  
tr|A2DXN8|A2DXN8_TRIVA Trichohyalin, putative OS=Trichomonas vag...    33   7.4  

>tr|B4FZG3|B4FZG3_MAIZE Putative uncharacterized protein OS=Zea mays
           PE=2 SV=1
          Length = 192

 Score = 37.7 bits (86), Expect = 0.30
 Identities = 19/51 (37%), Positives = 32/51 (62%)
 Frame = -3

Query: 242 YKKYTLQNQKIKVEQLVRELRKQGEFYKEPKNAKKIDLAEPGEEPRPAYIA 90
           YKK  +Q ++I+VE+   + +++ E   E K A  +DL +  E+ RPA+IA
Sbjct: 128 YKKLQVQQEQIEVEKTKLKFQERKEKNDELKEAMAVDLEDIAEDLRPAFIA 178


>tr|B0P0W3|B0P0W3_9CLOT Putative uncharacterized protein
           OS=Clostridium sp. SS2/1 GN=CLOSS21_01452 PE=4 SV=1
          Length = 404

 Score = 34.7 bits (78), Expect = 2.6
 Identities = 32/117 (27%), Positives = 50/117 (42%), Gaps = 4/117 (3%)
 Frame = -3

Query: 437 ISKTLRKMRKETQAKPKY*DKDSTMTRVERRKKYQELKKAQXXXXXXXXXXXXXXXKDVM 258
           + +T R  RKE Q K K   K  T T+  + KK +E K                    + 
Sbjct: 53  VQETKRTQRKE-QQKKKTTSKKHTKTKKIKSKKKEENKVIPMPTQVISKSSSDTIEGRIK 111

Query: 257 SVASHYKKYTLQNQKIKVEQLVR----ELRKQGEFYKEPKNAKKIDLAEPGEEPRPA 99
              +  K+  L+ QK K+E+ +R    + R   EFYK+     K ++A  G+E  P+
Sbjct: 112 DKQAKVKR--LKKQKAKIEEEIRLEQQKARSINEFYKKYTANSKAEIALYGQEITPS 166


>tr|A4JHB6|A4JHB6_BURVG Putative uncharacterized protein
           OS=Burkholderia vietnamiensis (strain G4 / LMG 22486)
           GN=Bcep1808_2677 PE=4 SV=1
          Length = 566

 Score = 34.3 bits (77), Expect = 3.3
 Identities = 24/69 (34%), Positives = 31/69 (44%)
 Frame = -3

Query: 353 ERRKKYQELKKAQXXXXXXXXXXXXXXXKDVMSVASHYKKYTLQNQKIKVEQLVRELRKQ 174
           ERRK+Y+  KKA                     +    KK    ++KIKV Q + +  KQ
Sbjct: 514 ERRKEYEANKKA--------------------GMFDSPKKEFPADEKIKVPQFMPKFGKQ 553

Query: 173 GEFYKEPKN 147
           GEFYKE  N
Sbjct: 554 GEFYKENNN 562


>tr|Q6MWC6|Q6MWC6_ORYSJ B1292H11.5 protein OS=Oryza sativa subsp.
            japonica GN=B1292H11.5 PE=4 SV=1
          Length = 1673

 Score = 34.3 bits (77), Expect = 3.3
 Identities = 17/60 (28%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
 Frame = -3

Query: 260  MSVASHYKKYTLQNQKIKVEQLVRELR-KQGEFYKEPKNAKKIDLAEPGEEPRPAYIAND 84
            M   S+Y +  +++  +  +  V +L  KQG+ +  P + ++ID+  PG +PRP +I+ +
Sbjct: 828  MENPSYYFEGVMESSNVYTKDTVDDLDDKQGQGFMSPDDLEEIDIG-PGNQPRPTFISKN 886


>tr|Q4SBJ4|Q4SBJ4_TETNG Chromosome 15 SCAF14667, whole genome
           shotgun sequence. (Fragment) OS=Tetraodon nigroviridis
           GN=GSTENG00020944001 PE=4 SV=1
          Length = 363

 Score = 33.5 bits (75), Expect = 5.7
 Identities = 17/51 (33%), Positives = 29/51 (56%)
 Frame = -3

Query: 239 KKYTLQNQKIKVEQLVRELRKQGEFYKEPKNAKKIDLAEPGEEPRPAYIAN 87
           KKY LQ +  KV++ VR++ ++ + + +    K IDL +  EE    +I N
Sbjct: 236 KKYHLQERVDKVKRRVRDVEEKSKEFVQKVEEKSIDLIQKWEEKSREFIGN 286


>tr|Q735Z6|Q735Z6_BACC1 Conserved domain protein OS=Bacillus cereus
           (strain ATCC 10987) GN=BCE_3005 PE=4 SV=1
          Length = 570

 Score = 33.5 bits (75), Expect = 5.7
 Identities = 31/119 (26%), Positives = 53/119 (44%), Gaps = 1/119 (0%)
 Frame = -3

Query: 443 QEISKTLRKMRKETQAKPKY*DKDSTMTRVERRKKYQELKKAQXXXXXXXXXXXXXXXKD 264
           QE++K   + + +  AKPK  +K   + + +  +K QE+ K++                 
Sbjct: 268 QEVAKPKEEEKVQEVAKPKEEEKVQEVVKPKEEEKVQEVAKSK-------------EEAK 314

Query: 263 VMSVASHYKKYTLQN-QKIKVEQLVRELRKQGEFYKEPKNAKKIDLAEPGEEPRPAYIA 90
           V  VA   ++  +Q   K K E  V+E  K  E  K  + AK  ++A+  EE +   IA
Sbjct: 315 VQEVAKPKEEAKVQEVVKPKEEAKVQEEAKAQEIAKAKEEAKAQEIAKAKEEEKAREIA 373



 Score = 32.7 bits (73), Expect = 9.7
 Identities = 31/119 (26%), Positives = 54/119 (45%), Gaps = 1/119 (0%)
 Frame = -3

Query: 443 QEISKTLRKMRKETQAKPKY*DKDSTMTRVERRKKYQELKKAQXXXXXXXXXXXXXXXKD 264
           QE++K   + + +  AKPK  +K   + + +  +K QE+ K +               + 
Sbjct: 256 QEVAKPKEEAKVQEVAKPKEEEKVQEVAKPKEEEKVQEVVKPK-------------EEEK 302

Query: 263 VMSVASHYKKYTLQN-QKIKVEQLVRELRKQGEFYKEPKNAKKIDLAEPGEEPRPAYIA 90
           V  VA   ++  +Q   K K E  V+E+ K  E  K  + AK  ++A+  EE +   IA
Sbjct: 303 VQEVAKSKEEAKVQEVAKPKEEAKVQEVVKPKEEAKVQEEAKAQEIAKAKEEAKAQEIA 361


>tr|Q568K8|Q568K8_DANRE Zgc:110237 OS=Danio rerio GN=zgc:110237 PE=2
           SV=1
          Length = 374

 Score = 33.1 bits (74), Expect = 7.4
 Identities = 16/51 (31%), Positives = 29/51 (56%)
 Frame = -3

Query: 239 KKYTLQNQKIKVEQLVRELRKQGEFYKEPKNAKKIDLAEPGEEPRPAYIAN 87
           KKY LQ +  KV++ V+++ ++ + + +    K IDL +  EE    +I N
Sbjct: 235 KKYNLQERVDKVKKKVKDVEEKSKEFVQKVEEKSIDLIQKWEEKSREFIGN 285


>tr|Q503Y3|Q503Y3_DANRE Zgc:110012 OS=Danio rerio GN=zgc:110012 PE=2
           SV=1
          Length = 359

 Score = 33.1 bits (74), Expect = 7.4
 Identities = 18/51 (35%), Positives = 27/51 (52%)
 Frame = -3

Query: 239 KKYTLQNQKIKVEQLVRELRKQGEFYKEPKNAKKIDLAEPGEEPRPAYIAN 87
           KKY LQ    KV+Q VR + ++ + + +    K IDL +  EE    +I N
Sbjct: 235 KKYHLQEHVDKVKQKVRNVEEKSKEFVQKVEEKGIDLIQKWEEKSREFIGN 285


>tr|A8E7K4|A8E7K4_DANRE Novel protein similar to vertebrate
           phosphate cytidylyltransferase 1, choline, alpha
           (PCYT1A, zgc:110237) OS=Danio rerio GN=CH211-252F13.3
           PE=1 SV=1
          Length = 374

 Score = 33.1 bits (74), Expect = 7.4
 Identities = 16/51 (31%), Positives = 29/51 (56%)
 Frame = -3

Query: 239 KKYTLQNQKIKVEQLVRELRKQGEFYKEPKNAKKIDLAEPGEEPRPAYIAN 87
           KKY LQ +  KV++ V+++ ++ + + +    K IDL +  EE    +I N
Sbjct: 235 KKYNLQERVDKVKKKVKDVEEKSKEFVQKVEEKSIDLIQKWEEKSREFIGN 285


>tr|Q65WZ2|Q65WZ2_ORYSJ Putative polyprotein OS=Oryza sativa subsp.
           japonica GN=P0617A08.11 PE=4 SV=1
          Length = 1490

 Score = 33.1 bits (74), Expect = 7.4
 Identities = 17/62 (27%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
 Frame = -3

Query: 266 DVMSVASHYKKYTLQNQKIKVEQLVRELR-KQGEFYKEPKNAKKIDLAEPGEEPRPAYIA 90
           ++M   ++Y +  L+   +  +  V +L  KQGE +    + ++ID+  PG+ PRP +I+
Sbjct: 786 NMMESPNYYVEGVLEGSNVYTKDTVDDLDDKQGEGFMSADDLEEIDIG-PGDRPRPTFIS 844

Query: 89  ND 84
            +
Sbjct: 845 KN 846