BP920859
Clone id YMU001_000142_E12
Library
Length 390
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000142_E12.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
TTTTTTGTTTTTGTATGTGATTAAAATGTCAACCAAACCCAGCTTCCATTTGCCCATCAA
ATGCAAGGCTTCCTTTTGCTCCCTTCACACGCAAATGCATGCACACACACGCACGCCTCT
CTGTGTTACACACATACAAGGTTGTATTACTGAGTAATCTGGCTCCTTGAGGATAAGTCG
GTCTATCCTCAAGGAGCTATATAAATCAAAACATATGTACAAGGACTCCAGCTCAAGGAG
GTCTGTAGGAGTCATAAAGTACAGGGCGGTGTGGAATAATGCCAAGTAAGCTGGCCCCGC
GATACTCTTTATCCATAAATCTACTAATACGTCAAGTCATGAGGGAGATACGGCTCTTCA
CAATATCAGTTGTAAGAGGAGACACATTTG
■■Homology search results ■■ -
sp_hit_id O22622
Definition sp|O22622|DAD2_ARATH Defender against cell death 2 OS=Arabidopsis thaliana
Align length 76
Score (bit) 28.9
E-value 8.4
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP920859|Adiantum capillus-veneris mRNA, clone:
YMU001_000142_E12.
(390 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|O22622|DAD2_ARATH Defender against cell death 2 OS=Arabidopsi... 29 8.4

>sp|O22622|DAD2_ARATH Defender against cell death 2 OS=Arabidopsis
thaliana GN=DAD2 PE=2 SV=1
Length = 115

Score = 28.9 bits (63), Expect = 8.4
Identities = 24/76 (31%), Positives = 40/76 (52%), Gaps = 6/76 (7%)
Frame = -1

Query: 279 LFHT--ALYFMTPTDLLELESLYICFDLYSSL---RIDRLILKEPDYSVIQPCM-CVTQR 118
LFH+ + Y TPT+L ++ LY+CF ++++L L+ P S + + C+
Sbjct: 12 LFHSLHSAYTATPTNL-KIIDLYVCFAVFTALIQVAYMALVGSFPFNSFLSGVLSCIGTA 70

Query: 117 GVRVCACICV*REQKE 70
+ VC I V +E KE
Sbjct: 71 VLAVCLRIQVNKENKE 86


tr_hit_id A7CS12
Definition tr|A7CS12|A7CS12_9BACT Putative uncharacterized protein OS=Opitutaceae bacterium TAV2
Align length 48
Score (bit) 35.4
E-value 1.4
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP920859|Adiantum capillus-veneris mRNA, clone:
YMU001_000142_E12.
(390 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A7CS12|A7CS12_9BACT Putative uncharacterized protein OS=Opitu... 35 1.4
tr|Q5FPD1|Q5FPD1_GLUOX Putative porin B outer transmembrane prot... 35 2.4

>tr|A7CS12|A7CS12_9BACT Putative uncharacterized protein
OS=Opitutaceae bacterium TAV2 GN=ObacDRAFT_2837 PE=4
SV=1
Length = 634

Score = 35.4 bits (80), Expect = 1.4
Identities = 21/48 (43%), Positives = 25/48 (52%), Gaps = 4/48 (8%)
Frame = +3

Query: 30 QPNPASICPSNARLP----FAPFTRKCMHTHARLSVLHTYKVVLLSNL 161
+P PAS PS+AR P F F +C+HTH SV V L S L
Sbjct: 14 KPPPASTAPSSARQPAPLLFTIFMTRCVHTHPFASVFLLAAVSLASRL 61


>tr|Q5FPD1|Q5FPD1_GLUOX Putative porin B outer transmembrane protein
OS=Gluconobacter oxydans GN=GOX2029 PE=4 SV=1
Length = 412

Score = 34.7 bits (78), Expect = 2.4
Identities = 18/34 (52%), Positives = 22/34 (64%), Gaps = 5/34 (14%)
Frame = -3

Query: 328 ISRFMDKEYRGASLLGIIPHRP-----VLYDSYR 242
+S F D+ Y GASLLGIIP RP V+Y Y+
Sbjct: 302 VSTFSDQVYVGASLLGIIPRRPFDRFGVMYSYYQ 335