BP920883
Clone id YMU001_000142_H10
Library
Length 288
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000142_H10.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
TGGAGCTAAGTAATCATTAAGGAGCCTAAGCACACGCACAATAAATACAGACATAGAAAA
TATTATAAAACAGACCACAAACTTTATCTTCCTAAAATACTATGTTCTATTCATTTAACC
AAGGCCATCTCCATCATACTGGACAGCAATCATAAAACAGATGCTGGAATCTCCATCCTA
TATCTATGCATTAAGCAGAGCAGTTGTTCATATTTGCATATAGAGCAATATTGCTAACAT
GCAGTCCATGGCCAATTGAGCCTCCAGATTAAAATACACTGATCTTAA
■■Homology search results ■■ -
sp_hit_id Q68VW2
Definition sp|Q68VW2|Y774_RICTY Uncharacterized membrane protein RT0774 OS=Rickettsia typhi
Align length 42
Score (bit) 28.9
E-value 8.2
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP920883|Adiantum capillus-veneris mRNA, clone:
YMU001_000142_H10.
(288 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q68VW2|Y774_RICTY Uncharacterized membrane protein RT0774 OS=... 29 8.2

>sp|Q68VW2|Y774_RICTY Uncharacterized membrane protein RT0774
OS=Rickettsia typhi GN=RT0774 PE=3 SV=1
Length = 302

Score = 28.9 bits (63), Expect = 8.2
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = +1

Query: 13 IIKEPKHTHNKYRHRKYYKTDHKLYLPKILCSIHLTKAISII 138
IIK THN H+ K ++KLY + S+ L + I ++
Sbjct: 161 IIKNLNITHNLEGHKFVIKRNNKLYFSPLFVSLILIETIDVV 202


tr_hit_id Q8I3Y7
Definition tr|Q8I3Y7|Q8I3Y7_PLAF7 Putative uncharacterized protein PFE0590w OS=Plasmodium falciparum (isolate 3D7)
Align length 107
Score (bit) 35.0
E-value 1.9
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP920883|Adiantum capillus-veneris mRNA, clone:
YMU001_000142_H10.
(288 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q8I3Y7|Q8I3Y7_PLAF7 Putative uncharacterized protein PFE0590w... 35 1.9
tr|A3B2W6|A3B2W6_ORYSJ Putative uncharacterized protein OS=Oryza... 33 9.3

>tr|Q8I3Y7|Q8I3Y7_PLAF7 Putative uncharacterized protein PFE0590w
OS=Plasmodium falciparum (isolate 3D7) GN=PFE0590w PE=4
SV=1
Length = 730

Score = 35.0 bits (79), Expect = 1.9
Identities = 25/107 (23%), Positives = 51/107 (47%), Gaps = 18/107 (16%)
Frame = +1

Query: 13 IIKEPKHTHNKYRHRKYYKTDHKLYLP----------KILCSIHLTKAISIILDSNHKTD 162
I+++ K + H++YYK DH ++ +ILC ++ I IL +K +
Sbjct: 599 ILQDKKQLYYNQIHKEYYKDDHHIFKKIIQIVSLENIQILCIVYTYLYIYNILHKLNKNN 658

Query: 163 AGISILYLCIKQSSCSYL---HIEQYC*HAVHGQL-----SLQIKIH 279
+ +L++ +C+Y+ +I Q+ +H ++ S+ KIH
Sbjct: 659 LSLFLLFI----QNCNYVNSFYISQHTTSKIHKEINDTIFSVNTKIH 701


>tr|A3B2W6|A3B2W6_ORYSJ Putative uncharacterized protein OS=Oryza
sativa subsp. japonica GN=OsJ_017388 PE=4 SV=1
Length = 681

Score = 32.7 bits (73), Expect = 9.3
Identities = 19/69 (27%), Positives = 32/69 (46%)
Frame = +1

Query: 46 YRHRKYYKTDHKLYLPKILCSIHLTKAISIILDSNHKTDAGISILYLCIKQSSCSYLHIE 225
YRHR Y K +++ P+I+ SI + + +I I + L +KQ + S +E
Sbjct: 511 YRHRTYSKASYQILFPRIVVSIFSQEGLGLIF--------AICAILLSLKQKAESLDEVE 562

Query: 226 QYC*HAVHG 252
+ HG
Sbjct: 563 SILENVNHG 571