BP920890 |
Clone id |
YMU001_000143_A06 |
Library |
YMU01 |
Length |
520 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000143_A06. |
Accession |
BP920890 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL848Contig1 |
Sequence |
TTTGAATTTAAAGGTGGAGCAAAAGGTTTTGCTGACAGCCTTGTTGCACAAGCTAAAAGC AATCTTAATGCAGCTCCGTTGCAAAAGTGGTTACCGGTCAACCTTGATACTGTCTACGTG AGAGAAGGAACACTCATGCTTCTTGCATATGGGGATGCTGAGCCCAGAGTAATGGAGAAT ATAAATGGACGTGTGAAGCTTGGGAGCAGATATGAGCAGGTAGATGTCCATGTTATTGGG AAGCTACAGCAGTGGCGGACTCCTAAAGCAGAGAGTAGTGGTGGCAGACTTCTTGTCAAA GTGGTTGCTGACATTAGGCAACAAAAATGGCATGTAAAATTGAGAGGAAAAAATTTGTTT GCTCCGCTTTTGGAGAGGCTGTTGGAAATTCCCCTAGATTGGTCGGATGGCAGAGCTTCT GGTGAGTTGAACATATGGGCGTCCAAAGGAGACTCATTTCCCAACTTAGCAGGACGGCTA GCAGTTTCCAAGTTAGGTTTCAAGATCTGGGAGGTTCCCT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
A7ZA74 |
Definition |
sp|A7ZA74|DLTA_BACA2 D-alanine--poly(phosphoribitol) ligase subunit 1 OS=Bacillus amyloliquefaciens (strain FZB42) |
Align length |
108 |
Score (bit) |
34.3 |
E-value |
0.36 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9TMR9 |
Definition |
tr|A9TMR9|A9TMR9_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
166 |
Score (bit) |
137.0 |
E-value |
3.0e-31 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP920890|Adiantum capillus-veneris mRNA, clone: YMU001_000143_A06. (520 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9TMR9|A9TMR9_PHYPA Predicted protein OS=Physcomitrella paten... 137 3e-31 tr|B8ADK1|B8ADK1_ORYSI Putative uncharacterized protein OS=Oryza... 116 8e-25 tr|A2ZPX9|A2ZPX9_ORYSJ Putative uncharacterized protein OS=Oryza... 116 8e-25 tr|A7P5H4|A7P5H4_VITVI Chromosome chr4 scaffold_6, whole genome ... 113 5e-24 tr|Q9SL97|Q9SL97_ARATH Putative uncharacterized protein At2g2566... 106 8e-22 tr|A5AWQ8|A5AWQ8_VITVI Putative uncharacterized protein OS=Vitis... 100 7e-20 tr|B0CC40|B0CC40_ACAM1 Putative uncharacterized protein OS=Acary... 44 0.005 tr|A0KH80|A0KH80_AERHH Putative uncharacterized protein OS=Aerom... 36 1.3 tr|A0ZDV0|A0ZDV0_NODSP Putative uncharacterized protein OS=Nodul... 35 1.7 tr|Q7NPE2|Q7NPE2_GLOVI Gsr0113 protein OS=Gloeobacter violaceus ... 35 2.2 tr|B2IU20|B2IU20_NOSP7 Putative uncharacterized protein OS=Nosto... 35 2.9 tr|A3N9E1|A3N9E1_BURP6 Putative siderophore non-ribosomal peptid... 35 2.9 tr|Q63U38|Q63U38_BURPS Putative siderophore related no-ribosomal... 34 3.8 tr|Q3JSH1|Q3JSH1_BURP1 Putative siderophore related no-ribosomal... 34 3.8 tr|A4SQR0|A4SQR0_AERS4 Putative uncharacterized protein OS=Aerom... 34 3.8 tr|A3NV36|A3NV36_BURP0 Siderophore malleobactin non-ribosomal pe... 34 3.8 tr|A3MJK0|A3MJK0_BURM7 Putative non-ribosomal peptide synthetase... 34 3.8 tr|A2S2X1|A2S2X1_BURM9 Putative non-ribosomal peptide synthetase... 34 3.8 tr|A1V3Z8|A1V3Z8_BURMS Putative non-ribosomal peptide synthetase... 34 3.8 tr|B8KMR6|B8KMR6_9GAMM VCBS protein OS=gamma proteobacterium NOR... 34 3.8 tr|B7CPM5|B7CPM5_BURPS Siderophore malleobactin non-ribosomal pe... 34 3.8 tr|B2GYB8|B2GYB8_BURPS Siderophore malleobactin non-ribosomal pe... 34 3.8 tr|A9K866|A9K866_BURMA Putative non-ribosomal peptide synthetase... 34 3.8 tr|A5XI24|A5XI24_BURMA Non-ribosomal peptide synthase OS=Burkhol... 34 3.8 tr|Q4SE51|Q4SE51_TETNG Chromosome undetermined SCAF14625, whole ... 34 5.0 tr|B4VJX7|B4VJX7_9CYAN Putative uncharacterized protein OS=Micro... 34 5.0 tr|Q851V9|Q851V9_ORYSJ Putative cytochrome P450 OS=Oryza sativa ... 34 5.0 tr|A3AKH4|A3AKH4_ORYSJ Putative uncharacterized protein OS=Oryza... 34 5.0 tr|A2XJN0|A2XJN0_ORYSI Putative uncharacterized protein OS=Oryza... 34 5.0 tr|A2XJM8|A2XJM8_ORYSI Putative uncharacterized protein OS=Oryza... 34 5.0
>tr|A9TMR9|A9TMR9_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_196483 PE=4 SV=1 Length = 2019
Score = 137 bits (345), Expect = 3e-31 Identities = 72/166 (43%), Positives = 95/166 (57%) Frame = +1
Query: 22 KGFADSLVAQAKSNLNAAPLQKWLPVNLDTVYVREGTLMLLAYGDAEPRVMENINGRVKL 201 K A+ LV QAK ++ + W P+ L++VY++EGTL LL YGD EPRVME + G VKL Sbjct: 420 KSLANRLVRQAKRRVDVSRANGWTPIALNSVYIKEGTLSLLGYGDEEPRVMERVEGSVKL 479
Query: 202 GSRYEQVDVHVIGKLQQWRTPKAESSGGRLLVKVVADIRQQKWHVKLRGKNLFAPLLERL 381 ++Q+ V V G+ +WRT K +GGRLLVKV D+ Q W V+L+ N+FAP Sbjct: 480 SGNHQQILVQVTGRPNEWRTGKT-GNGGRLLVKVAVDLANQSWDVRLKSCNIFAP----- 533
Query: 382 LEIPLDWSDGRASGELNIWASKGDSFPNLAGRLAVSKLGFKIWEVP 519 L IW K D+FPN GRL V L F+I + P Sbjct: 534 ---------------LRIWMKKEDAFPNFGGRLDVKGLDFRIADAP 564
>tr|B8ADK1|B8ADK1_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_00642 PE=4 SV=1 Length = 2080
Score = 116 bits (290), Expect = 8e-25 Identities = 54/118 (45%), Positives = 74/118 (62%) Frame = +1
Query: 166 RVMENINGRVKLGSRYEQVDVHVIGKLQQWRTPKAESSGGRLLVKVVADIRQQKWHVKLR 345 R M++ NG +K + Y +V VHV G +WR + GG L V DI +Q WH L Sbjct: 555 REMKHANGHIKFKNSYNRVHVHVTGNCMEWRQDRTSQGGGYLSTDVFVDIAEQTWHANLN 614
Query: 346 GKNLFAPLLERLLEIPLDWSDGRASGELNIWASKGDSFPNLAGRLAVSKLGFKIWEVP 519 N FAPL ER+LEIP+ W+ GRA+GE+++ SKGDSFP++ G+L V L F+I + P Sbjct: 615 VVNAFAPLFERILEIPVVWNKGRATGEVHLCMSKGDSFPSIHGQLDVKGLAFQILDAP 672
>tr|A2ZPX9|A2ZPX9_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_000601 PE=4 SV=1 Length = 1990
Score = 116 bits (290), Expect = 8e-25 Identities = 54/118 (45%), Positives = 74/118 (62%) Frame = +1
Query: 166 RVMENINGRVKLGSRYEQVDVHVIGKLQQWRTPKAESSGGRLLVKVVADIRQQKWHVKLR 345 R M++ NG +K + Y +V VHV G +WR + GG L V DI +Q WH L Sbjct: 555 REMKHANGHIKFKNSYNRVHVHVTGNCMEWRQDRTSQGGGYLSTDVFVDIAEQTWHANLN 614
Query: 346 GKNLFAPLLERLLEIPLDWSDGRASGELNIWASKGDSFPNLAGRLAVSKLGFKIWEVP 519 N FAPL ER+LEIP+ W+ GRA+GE+++ SKGDSFP++ G+L V L F+I + P Sbjct: 615 VVNAFAPLFERILEIPVVWNKGRATGEVHLCMSKGDSFPSIHGQLDVKGLAFQILDAP 672
>tr|A7P5H4|A7P5H4_VITVI Chromosome chr4 scaffold_6, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00032534001 PE=4 SV=1 Length = 2137
Score = 113 bits (283), Expect = 5e-24 Identities = 59/162 (36%), Positives = 91/162 (56%) Frame = +1
Query: 34 DSLVAQAKSNLNAAPLQKWLPVNLDTVYVREGTLMLLAYGDAEPRVMENINGRVKLGSRY 213 + +VA ++ ++K PV LD+V+ + GTL+LLAYGD+EPR MEN+NG K + Y Sbjct: 607 EDIVAGHLDEVHTEGIEKMFPVTLDSVHFKSGTLLLLAYGDSEPREMENVNGHAKFQNHY 666
Query: 214 EQVDVHVIGKLQQWRTPKAESSGGRLLVKVVADIRQQKWHVKLRGKNLFAPLLERLLEIP 393 ++ V + G + WR+ GG L + V D +Q+WH L+ NLFAP Sbjct: 667 GRMHVQLSGNCKMWRSDVTSEDGGWLSLDVFVDNVEQQWHANLKVINLFAP--------- 717
Query: 394 LDWSDGRASGELNIWASKGDSFPNLAGRLAVSKLGFKIWEVP 519 ++I SKG++FPNL G+L ++ L F+I++ P Sbjct: 718 -----------VHICMSKGEAFPNLHGQLNMTGLAFQIFDAP 748
>tr|Q9SL97|Q9SL97_ARATH Putative uncharacterized protein At2g25660 OS=Arabidopsis thaliana GN=At2g25660 PE=2 SV=1 Length = 2136
Score = 106 bits (264), Expect = 8e-22 Identities = 60/152 (39%), Positives = 80/152 (52%) Frame = +1
Query: 64 LNAAPLQKWLPVNLDTVYVREGTLMLLAYGDAEPRVMENINGRVKLGSRYEQVDVHVIGK 243 L A ++K LPV LD+V + GTL+LLAYGD EPR M N++G VK + Y +V V + G Sbjct: 599 LPAVYVEKTLPVMLDSVQFKGGTLLLLAYGDTEPREMRNVHGHVKFQNHYGRVYVQLGGN 658
Query: 244 LQQWRTPKAESSGGRLLVKVVADIRQQKWHVKLRGKNLFAPLLERLLEIPLDWSDGRASG 423 WR+ GG L V V D +Q WH L N F P Sbjct: 659 CNMWRSDVTSEDGGLLSVDVFVDTVEQNWHANLNVANFFVP------------------- 699
Query: 424 ELNIWASKGDSFPNLAGRLAVSKLGFKIWEVP 519 +++ S+G+SFPNL G+L V+ LGF I + P Sbjct: 700 -VHLCMSRGESFPNLHGQLDVTGLGFHINDAP 730
>tr|A5AWQ8|A5AWQ8_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_022809 PE=4 SV=1 Length = 2404
Score = 99.8 bits (247), Expect = 7e-20 Identities = 47/116 (40%), Positives = 71/116 (61%) Frame = +1
Query: 34 DSLVAQAKSNLNAAPLQKWLPVNLDTVYVREGTLMLLAYGDAEPRVMENINGRVKLGSRY 213 + +VA ++ ++K PV LD+V+ + GTL+LLAYGD+EPR MEN+NG K + Y Sbjct: 559 EDIVAGHLDEVHTEGIEKMFPVTLDSVHFKSGTLLLLAYGDSEPREMENVNGHAKFQNHY 618
Query: 214 EQVDVHVIGKLQQWRTPKAESSGGRLLVKVVADIRQQKWHVKLRGKNLFAPLLERL 381 ++ V + G + WR+ GG L + V D +Q+WH L+ NLFAP+ +RL Sbjct: 619 GRMHVQLSGNCKMWRSDVTSEDGGWLSLDVFVDNVEQQWHANLKVINLFAPVSKRL 674
>tr|B0CC40|B0CC40_ACAM1 Putative uncharacterized protein OS=Acaryochloris marina (strain MBIC 11017) GN=AM1_0530 PE=4 SV=1 Length = 1728
Score = 43.9 bits (102), Expect = 0.005 Identities = 31/127 (24%), Positives = 59/127 (46%), Gaps = 1/127 (0%) Frame = +1
Query: 58 SNLNAAPLQKWLPVNLDTVYVREGTLMLLAYGDAEPRVMENINGRVKLGSRYEQVDVHVI 237 + L + P + W+ V L+ + V++GT + + E R +NG + + Sbjct: 149 TRLRSGPSKAWIKVKLNQLQVQQGTAQ-IEPANIEARQFSQLNGTLNFST---------- 197
Query: 238 GKLQQWRTPKAESSGGRLLVKVVADIRQQKWHVKLRGKNLF-APLLERLLEIPLDWSDGR 414 + + T SGG+L VK +Q+K V + K+L APL+ L ++P + + G+ Sbjct: 198 PETLYFNTQSQVDSGGQLSVKGAWQSKQKKLEVNAQTKDLVAAPLMGLLPKLPFEINKGQ 257
Query: 415 ASGELNI 435 G+ + Sbjct: 258 LQGQFQV 264
Score = 35.8 bits (81), Expect = 1.3 Identities = 29/122 (23%), Positives = 59/122 (48%), Gaps = 2/122 (1%) Frame = +1
Query: 160 EPRVMENINGRVKLGSRYEQVDVHVIGKLQQWRTPKAESSG--GRLLVKVVADIRQQKWH 333 E +++N R + S+ Q V +G Q++R G GRL + A +Q+ + Sbjct: 330 EDLILDNRRQRPRRLSQL-QGTVDFLGLKQRFRFDLQGRMGQTGRLKARGTASFLEQQTN 388
Query: 334 VKLRGKNLFAPLLERLLEIPLDWSDGRASGELNIWASKGDSFPNLAGRLAVSKLGFKIWE 513 ++L+ +NL APL ++ ++P+ G+ S + + + P++ G + ++ I Sbjct: 389 MRLQLQNLPAPLFDQAFQLPITADSGQVSASIRV-KLRPKQRPDVQGTALLKRVEMGIVN 447
Query: 514 VP 519 VP Sbjct: 448 VP 449
>tr|A0KH80|A0KH80_AERHH Putative uncharacterized protein OS=Aeromonas hydrophila subsp. hydrophila (strain ATCC 7966 / NCIB 9240) GN=AHA_1089 PE=4 SV=1 Length = 384
Score = 35.8 bits (81), Expect = 1.3 Identities = 25/80 (31%), Positives = 38/80 (47%), Gaps = 6/80 (7%) Frame = +1
Query: 106 DTVYVREGTLM------LLAYGDAEPRVMENINGRVKLGSRYEQVDVHVIGKLQQWRTPK 267 D VY RE LLA G A + NG + R EQ+ + G ++Q+R + Sbjct: 33 DEVYAREQATRDALRQALLASGAAVSSIQRLENGSL----RSEQIQIRSGGDIRQYRLKR 88
Query: 268 AESSGGRLLVKVVADIRQQK 327 E GR+ + V ADI+ ++ Sbjct: 89 EEVRNGRMYITVQADIQAER 108
>tr|A0ZDV0|A0ZDV0_NODSP Putative uncharacterized protein OS=Nodularia spumigena CCY 9414 GN=N9414_15772 PE=4 SV=1 Length = 1895
Score = 35.4 bits (80), Expect = 1.7 Identities = 36/156 (23%), Positives = 63/156 (40%), Gaps = 10/156 (6%) Frame = +1
Query: 82 QKWLPVNLDTVYVREGTLMLLAYGDAE----------PRVMENINGRVKLGSRYEQVDVH 231 Q + +LD + R G L+LL E P +NG +L + + Sbjct: 152 QALIKTDLDKLRFRNGKLVLLRQVGDEGVISSSSTIPPVAFSQVNGTAQLLKENQLIKFQ 211
Query: 232 VIGKLQQWRTPKAESSGGRLLVKVVADIRQQKWHVKLRGKNLFAPLLERLLEIPLDWSDG 411 V G+ SGG + ++ + ++LR ++LFA + L+++P D G Sbjct: 212 VRGEAD---------SGGNVALQGEVIPQTLAAKLQLRSQDLFAAQITDLIKLPFDLQAG 262
Query: 412 RASGELNIWASKGDSFPNLAGRLAVSKLGFKIWEVP 519 + +G L I + P L G + + +I VP Sbjct: 263 KVNGNLQIQLTPKQP-PLLFGNANLQGVTLQIPNVP 297
>tr|Q7NPE2|Q7NPE2_GLOVI Gsr0113 protein OS=Gloeobacter violaceus GN=gsr0113 PE=4 SV=1 Length = 72
Score = 35.0 bits (79), Expect = 2.2 Identities = 25/71 (35%), Positives = 36/71 (50%) Frame = +1
Query: 172 MENINGRVKLGSRYEQVDVHVIGKLQQWRTPKAESSGGRLLVKVVADIRQQKWHVKLRGK 351 M N + V+ G YEQV V + L A +GG ++ + ++W +LRG Sbjct: 1 MVNWHWAVEAGGAYEQV-VKLAVSLGNDTDTTACLAGGIAGLQQGIEAIPERWQARLRGG 59
Query: 352 NLFAPLLERLL 384 L+ PLLERLL Sbjct: 60 ALYRPLLERLL 70
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