BP920895 [AcEST]

BP920895
Clone id	YMU001_000143_A11
Library	YMU01
Length	505
Definition	Adiantum capillus-veneris mRNA. clone: YMU001_000143_A11.
Accession	BP920895
Tissue type	prothallium
Developmental stage	-
Contig ID	-
Sequence	AATCATTGTGTCCAAAATATTCGCTCCTACCTCACCATCCAATGTTACTCTTGACAAAGG TTCCCATAACTTGTAATCAACTTGGATGACTAGAACCTCGTCATCTTTAATGGCCTTGTC ATTGCCATTGCCATTGCTGCTTGCTTTCTCTTCTTTACGGTGAACTTCGCAGCTCCTGGT AAAGTACGTCTAATATCATCTAATTCAACTGTGAGCTTCTAAATTCACTCACACCTTGAC ATAATTATCTCCATGCTCATTACTAGAACTGCTATCTGAACCAGAATACCTTTCCTCCAG TTCACTATCCTTGCACTGCCACTCAGCTAGCCTCTTGTGTCTGGTGGCTAGTTGACCCTT GGGTAGCATTTTCCATCCTCAGGTCAGTGTTCCCAGCTCCAAGCAAGTTTGTATAGACTT GGCGTACTTCCTCACCCAAATAGTCTCATTGGCCTCTTCCTTACTAGACACTCTAATACA CTTATCCTCATAAGCTACTAAAGAC
■■Homology search results ■■	-
Swiss-Prot (release 56.9)	Link to BlastX Result : Swiss-Prot
sp_hit_id	-
Definition	No hits.
Align length	-
Score (bit)	-
E-value	-
Report	BLASTX 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BP920895\|Adiantum capillus-veneris mRNA, clone: YMU001_000143_A11. (505 letters) Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters Searching..................................................done *** No hits found ****
TrEMBL (release 39.9)	Link to BlastX Result : TrEMBL
tr_hit_id	B2J8M3
Definition	tr\|B2J8M3\|B2J8M3_NOSP7 Na-Ca exchanger/integrin-beta4 OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102)
Align length	61
Score (bit)	33.1
E-value	7.8
Report	BLASTX 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BP920895\|Adiantum capillus-veneris mRNA, clone: YMU001_000143_A11. (505 letters) Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value tr\|B2J8M3\|B2J8M3_NOSP7 Na-Ca exchanger/integrin-beta4 OS=Nostoc ... 33 7.8 >tr\|B2J8M3\|B2J8M3_NOSP7 Na-Ca exchanger/integrin-beta4 OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN=Npun_R2439 PE=4 SV=1 Length = 2999 Score = 33.1 bits (74), Expect = 7.8 Identities = 23/61 (37%), Positives = 33/61 (54%), Gaps = 5/61 (8%) Frame = -2 Query: 180 TRSCEVHRKEEKASSNGNGN-DKAI----KDDEVLVIQVDYKLWEPLSRVTLDGEVGANI 16 T+ EVH EE +++G + DK + KDDE L I L TL+G++G+NI Sbjct: 1234 TQGVEVHLVEEDGNTDGGASGDKLLSLRNKDDEPLSINSIENLQGSNFADTLEGDIGSNI 1293 Query: 15 L 13 L Sbjct: 1294 L 1294