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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP920898
Clone id YMU001_000143_B04
Library
Length 494
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000143_B04.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
CTGGAGATCCACTAAAACCATCTGTAAAGTTGTTCCTTGACCTGCTTTTGGATATGGGTA
GGCAGTCATGCGGAAAGAGAACAGCCGTACCCATTAGACAGATCGATATCACTCACACCC
CGGTGTATTATATCCTGTTAGATCGCCCTTCACTGTTGTAGAGGACTAAGATCTGCGGAA
GAATTCATGGAAACCAGACGTCTCCCTTAGATCTAAGTGCAGATCTGCACTGCACGGCAG
TAGGGAAAAGCTCCCAACTTGAAAACAAGGAGCACTGCGGCGTCATAGCAAAGCCCAAGC
AAGAGTTGATGGAAGGGCTGAGAAGAAACGGTGTATATGCAAACGCACAAGCAAGAGGTA
TGCAGATACACAGGGAGGGCATCAACCCTAGAAATGAAGGAAGTGTGCTCAACTACAGAT
GGATATTGAGGAAATATGCGTGAGCATAACTAAGAGTCTCTTCTGTGCCACAGTCAGCCA
ACATTCGCGGCCGC
■■Homology search results ■■ -
sp_hit_id Q9J5I3
Definition sp|Q9J5I3|V018_FOWPV Putative ankyrin repeat protein FPV018 OS=Fowlpox virus
Align length 36
Score (bit) 30.8
E-value 3.3
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP920898|Adiantum capillus-veneris mRNA, clone:
YMU001_000143_B04.
         (479 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9J5I3|V018_FOWPV Putative ankyrin repeat protein FPV018 OS=F...    31   3.3  
sp|Q1LT55|RIMN_BAUCH Putative ribosome maturation factor rimN OS...    30   7.4  
sp|Q7TQK1|INT7_MOUSE Integrator complex subunit 7 OS=Mus musculu...    30   7.4  
sp|Q54264|STRB2_STRGA Putative inosamine-phosphate amidinotransf...    29   9.6  

>sp|Q9J5I3|V018_FOWPV Putative ankyrin repeat protein FPV018
           OS=Fowlpox virus GN=FPV018 PE=4 SV=1
          Length = 700

 Score = 30.8 bits (68), Expect = 3.3
 Identities = 17/36 (47%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
 Frame = -1

Query: 401 SFISRVDALPV-YLHTSCLCVCIYTVSSQPFHQLLL 297
           S IS + +LPV YL  S LC+CIY + + P  + LL
Sbjct: 347 SIISYILSLPVNYLPISILCMCIYELRNLPITRKLL 382


>sp|Q1LT55|RIMN_BAUCH Putative ribosome maturation factor rimN
           OS=Baumannia cicadellinicola subsp. Homalodisca
           coagulata GN=rimN PE=3 SV=1
          Length = 198

 Score = 29.6 bits (65), Expect = 7.4
 Identities = 12/31 (38%), Positives = 16/31 (51%)
 Frame = -3

Query: 330 RFFSALPSTLAWALL*RRSAPCFQVGSFSLL 238
           R FS  P  + W +  R + PC+  G FS L
Sbjct: 92  RMFSLWPGPITWTIPARTTTPCWLTGKFSTL 122


>sp|Q7TQK1|INT7_MOUSE Integrator complex subunit 7 OS=Mus musculus
           GN=Ints7 PE=1 SV=1
          Length = 966

 Score = 29.6 bits (65), Expect = 7.4
 Identities = 14/42 (33%), Positives = 21/42 (50%)
 Frame = -1

Query: 440 RIFPQYPSVVEHTSFISRVDALPVYLHTSCLCVCIYTVSSQP 315
           R+   Y  V+E    ++R  A   Y+HT+CLC  I  +   P
Sbjct: 747 RMMSVYSRVLEEVESLNRKYAPVSYMHTACLCNAIIALLKVP 788


>sp|Q54264|STRB2_STRGA Putative inosamine-phosphate
           amidinotransferase 2 OS=Streptomyces glaucescens
           GN=strB2 PE=3 SV=1
          Length = 319

 Score = 29.3 bits (64), Expect = 9.6
 Identities = 18/72 (25%), Positives = 36/72 (50%), Gaps = 6/72 (8%)
 Frame = +3

Query: 225 LHCTAVGKSSQLENKEHCGVIAKPKQELMEGLRRNGV------YANAQARGMQIHREGIN 386
           +H +  G S+ L  +    ++ + + +LM  L  NG+        +A+A G   HR  ++
Sbjct: 248 VHSSGWGGSNILVVRPGLVIVDRRQADLMRVLENNGIDVLPLQLTHARALGSGFHRVTVD 307

Query: 387 PRNEGSVLNYRW 422
            R  G++ +YR+
Sbjct: 308 VRRTGTLESYRF 319
tr_hit_id A5DIX9
Definition tr|A5DIX9|A5DIX9_PICGU Putative uncharacterized protein OS=Pichia guilliermondii
Align length 104
Score (bit) 35.4
E-value 1.4
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP920898|Adiantum capillus-veneris mRNA, clone:
YMU001_000143_B04.
         (479 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A5DIX9|A5DIX9_PICGU Putative uncharacterized protein OS=Pichi...    35   1.4  
tr|B4LXD1|B4LXD1_DROVI GJ22884 OS=Drosophila virilis GN=GJ22884 ...    34   3.2  
tr|B5QIV3|B5QIV3_CAMJE Putative transposase OS=Campylobacter jej...    34   4.1  
tr|B5GIJ0|B5GIJ0_9ACTO Putative uncharacterized protein OS=Strep...    34   4.1  
tr|B1JB21|B1JB21_PSEPW Phage baseplate assembly protein V OS=Pse...    33   7.0  
tr|B8CWJ2|B8CWJ2_9FIRM UDP-N-acetylmuramoylalanyl-D-glutamyl-2, ...    33   7.0  
tr|A7IX81|A7IX81_PBCVN Putative uncharacterized protein B556R OS...    33   9.2  
tr|Q88IZ7|Q88IZ7_PSEPK Sulfatase domain protein, putative OS=Pse...    33   9.2  
tr|A5W4A9|A5W4A9_PSEP1 Sulfatase OS=Pseudomonas putida (strain F...    33   9.2  

>tr|A5DIX9|A5DIX9_PICGU Putative uncharacterized protein OS=Pichia
           guilliermondii GN=PGUG_03230 PE=3 SV=2
          Length = 902

 Score = 35.4 bits (80), Expect = 1.4
 Identities = 22/104 (21%), Positives = 41/104 (39%)
 Frame = +3

Query: 99  QIDITHTPVYYILLDRPSLL*RTKICGRIHGNQTSPLDLSADLHCTAVGKSSQLENKEHC 278
           Q  +  +P++Y     P+           HG  +SPL  S+ +H T+ G  S   +    
Sbjct: 37  QAHVPSSPLFYASSSNPASEANAPATASTHGGMSSPLHYSSSVHHTSGGLESSRRSDRLT 96

Query: 279 GVIAKPKQELMEGLRRNGVYANAQARGMQIHREGINPRNEGSVL 410
             + +  +        N V ++   R M +     NP++  S+L
Sbjct: 97  SDVERIGRRHQRSDLNNDVMSSPMRRRMFVDETNSNPQSSSSLL 140


>tr|B4LXD1|B4LXD1_DROVI GJ22884 OS=Drosophila virilis GN=GJ22884
           PE=4 SV=1
          Length = 2179

 Score = 34.3 bits (77), Expect = 3.2
 Identities = 26/92 (28%), Positives = 36/92 (39%)
 Frame = +3

Query: 51  DMGRQSCGKRTAVPIRQIDITHTPVYYILLDRPSLL*RTKICGRIHGNQTSPLDLSADLH 230
           D G +  G   A+  +Q+ + H         R  LL  TK     H N T+P+       
Sbjct: 356 DEGAEEAGGAVAISAQQLRMQHQRKLLEAAQREPLLLSTKAVKAEHSNYTTPIRYPYVF- 414

Query: 231 CTAVGKSSQLENKEHCGVIAKPKQELMEGLRR 326
                  SQLE K+H G I   +  L E  +R
Sbjct: 415 ------DSQLEAKQHAGFIGGSRITLPENAQR 440


>tr|B5QIV3|B5QIV3_CAMJE Putative transposase OS=Campylobacter jejuni
           subsp. jejuni CG8421 GN=Cj8421_0822 PE=4 SV=1
          Length = 430

 Score = 33.9 bits (76), Expect = 4.1
 Identities = 16/53 (30%), Positives = 32/53 (60%)
 Frame = +3

Query: 240 VGKSSQLENKEHCGVIAKPKQELMEGLRRNGVYANAQARGMQIHREGINPRNE 398
           + ++ QL  K+H    AK KQE ++G++++  Y  A  +  ++HR+  N R++
Sbjct: 227 IKRARQLSKKQH----AKTKQEALQGIKKSSNYLKASIKLNKLHRKIANIRSD 275


>tr|B5GIJ0|B5GIJ0_9ACTO Putative uncharacterized protein
           OS=Streptomyces sp. SPB74 GN=SSBG_04159 PE=4 SV=1
          Length = 867

 Score = 33.9 bits (76), Expect = 4.1
 Identities = 26/74 (35%), Positives = 35/74 (47%), Gaps = 5/74 (6%)
 Frame = +3

Query: 162 RTKICGRIHGNQT--SPLDLSADLHCTAVGKSSQLENKEHCGVIAKPKQELMEGLRRNG- 332
           R + CG +   Q   + + L+  L CTA      LE  E  GV+ +P+     GL + G 
Sbjct: 222 RVRQCGGVVKGQRGRAAVTLARLLGCTAAAAERVLERLEEWGVVVRPRAGTGSGLGQRGR 281

Query: 333 --VYANAQARGMQI 368
             V A A ARG QI
Sbjct: 282 LVVPAVAAARGGQI 295


>tr|B1JB21|B1JB21_PSEPW Phage baseplate assembly protein V
           OS=Pseudomonas putida (strain W619) GN=PputW619_4046
           PE=4 SV=1
          Length = 186

 Score = 33.1 bits (74), Expect = 7.0
 Identities = 21/72 (29%), Positives = 30/72 (41%), Gaps = 2/72 (2%)
 Frame = +3

Query: 228 HCTAVGKSS--QLENKEHCGVIAKPKQELMEGLRRNGVYANAQARGMQIHREGINPRNEG 401
           H  A GK+   +       GV+  P  EL +G    G+Y NA     Q+    +    +G
Sbjct: 47  HAQAAGKARHWRAPTLGEQGVLLSPSGELAQGTFIPGLYGNAGLPPAQLDHTEVWQFEDG 106

Query: 402 SVLNYRWILRKY 437
             L Y W  R+Y
Sbjct: 107 GSLTYDWQARRY 118


>tr|B8CWJ2|B8CWJ2_9FIRM UDP-N-acetylmuramoylalanyl-D-glutamyl-2,
           6-diaminopimelate--D-alanyl-D-alanyl ligase
           OS=Halothermothrix orenii H 168 GN=Hore_09050 PE=4 SV=1
          Length = 461

 Score = 33.1 bits (74), Expect = 7.0
 Identities = 19/47 (40%), Positives = 28/47 (59%), Gaps = 4/47 (8%)
 Frame = +3

Query: 252 SQLENKEHCGVIAKPKQELMEGLRRNGV----YANAQARGMQIHREG 380
           + LEN +  G +A+ K+EL+EGL  NG+    Y N   R M+ + EG
Sbjct: 192 THLENLKTVGNVARGKRELIEGLPTNGLAILNYDNKYVRDMKDYVEG 238


>tr|A7IX81|A7IX81_PBCVN Putative uncharacterized protein B556R
           OS=Paramecium bursaria Chlorella virus NY2A GN=B556R
           PE=4 SV=1
          Length = 374

 Score = 32.7 bits (73), Expect = 9.2
 Identities = 16/34 (47%), Positives = 19/34 (55%)
 Frame = -1

Query: 134 DIIHRGVSDIDLSNGYGCSLSA*LPTHIQKQVKE 33
           D I   V D+DL  GY C L+  LPTH Q   K+
Sbjct: 231 DWIQEAVEDLDLKQGYKCVLNDALPTHKQVYSKK 264


>tr|Q88IZ7|Q88IZ7_PSEPK Sulfatase domain protein, putative
           OS=Pseudomonas putida (strain KT2440) GN=PP2852 PE=4
           SV=1
          Length = 733

 Score = 32.7 bits (73), Expect = 9.2
 Identities = 22/47 (46%), Positives = 27/47 (57%)
 Frame = -3

Query: 357 LLLVRLHIHRFFSALPSTLAWALL*RRSAPCFQVGSFSLLPCSADLH 217
           LL+V LH   ++ ALP  LAWA L   SA    V +   LP SADL+
Sbjct: 47  LLIVLLHRRPWWLALPVLLAWAALWVASAEL--VSAVGRLPTSADLN 91


>tr|A5W4A9|A5W4A9_PSEP1 Sulfatase OS=Pseudomonas putida (strain F1 /
           ATCC 700007) GN=Pput_2837 PE=3 SV=1
          Length = 733

 Score = 32.7 bits (73), Expect = 9.2
 Identities = 22/47 (46%), Positives = 27/47 (57%)
 Frame = -3

Query: 357 LLLVRLHIHRFFSALPSTLAWALL*RRSAPCFQVGSFSLLPCSADLH 217
           LL+V LH   ++ ALP  LAWA L   SA    V +   LP SADL+
Sbjct: 47  LLIVLLHRRPWWLALPVLLAWAALWVASAEL--VSAVGRLPTSADLN 91