BP920900 |
Clone id |
YMU001_000143_B06 |
Library |
YMU01 |
Length |
513 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000143_B06. |
Accession |
BP920900 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL15Contig1 |
Sequence |
GTAATGAACAGGCACCTTTGTTCAGAACTTTGCTTTACATAACAATATAGAAACAAGGAC AGGGTCAAGCCAGCGCCTTGCGAAAGGAAAGACCCCAAGTTTTCTCCGTCTACTCTACTT GCGCATACCAAATACCCTGAATCTTGACATCTTTGGGGGCTTGATAGCCAAGGTCAGTAT CAGAAGGCTGAACACTTTCAAAGACACCACCAATCTCCCCAGTTTCAAGGTTGGTTTTAG CAACACTGAATGTGATTTTGCCATTAAGAGCGGTTGTATCCTTGTTATTCTCTTTCGCTA GCTCTTCCTCATCACCAGCACCTCCAGCAGGAATAGCCACAGCGTTGTCATATCCTTGGG AGCCACCACGGCCCTTAGGGTCAAGGAAGGAAGAACCTCTGTATGAAGGCACCAAGAATT GTCCACTGAAGGCATCAGGCTTTCCTGTGGCTACAAGCTGCTTGATGGTGAACAAGAAGG GCACCCTTTCACCCCCAGGTAGCTGAACGGTCA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P14226 |
Definition |
sp|P14226|PSBO_PEA Oxygen-evolving enhancer protein 1, chloroplastic OS=Pisum sativum |
Align length |
133 |
Score (bit) |
223.0 |
E-value |
3.0e-58 |
Report |
![](http://dbarchive.biosciencedbc.jp/images/togodb/expand.png) BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP920900|Adiantum capillus-veneris mRNA, clone: YMU001_000143_B06. (513 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|P14226|PSBO_PEA Oxygen-evolving enhancer protein 1, chloropla... 223 3e-58 sp|O49079|PSBO_FRIAG Oxygen-evolving enhancer protein 1, chlorop... 223 4e-58 sp|P23322|PSBO_SOLLC Oxygen-evolving enhancer protein 1, chlorop... 222 7e-58 sp|P26320|PSBO_SOLTU Oxygen-evolving enhancer protein 1, chlorop... 222 9e-58 sp|Q40459|PSBO_TOBAC Oxygen-evolving enhancer protein 1, chlorop... 220 3e-57 sp|P12359|PSBO_SPIOL Oxygen-evolving enhancer protein 1, chlorop... 214 1e-55 sp|Q9S841|PSBO2_ARATH Oxygen-evolving enhancer protein 1-2, chlo... 214 2e-55 sp|P23321|PSBO1_ARATH Oxygen-evolving enhancer protein 1-1, chlo... 213 4e-55 sp|P27665|PSBO_WHEAT Oxygen-evolving enhancer protein 1, chlorop... 199 8e-51 sp|P46483|PSBO_EUGGR Oxygen-evolving enhancer protein 1, chlorop... 186 7e-47 sp|Q9SBN6|PSBO_VOLCA Oxygen-evolving enhancer protein 1, chlorop... 182 1e-45 sp|P12853|PSBO_CHLRE Oxygen-evolving enhancer protein 1, chlorop... 181 2e-45 sp|P13907|PSBO_ANASP Photosystem II manganese-stabilizing polype... 160 2e-39 sp|Q9R6W6|PSBO_CYAA5 Photosystem II manganese-stabilizing polype... 142 9e-34 sp|P0A431|PSBO_THEEB Photosystem II manganese-stabilizing polype... 138 2e-32 sp|P0A432|PSBO_SYNEN Photosystem II manganese-stabilizing polype... 138 2e-32 sp|P11472|PSBO_SYNE7 Photosystem II manganese-stabilizing polype... 131 2e-30 sp|P10549|PSBO_SYNY3 Photosystem II manganese-stabilizing polype... 129 1e-29 sp|P84989|PSBO_POPEU Oxygen-evolving enhancer protein 1, chlorop... 76 8e-14 sp|P84718|PSBO_PINST Putative oxygen-evolving enhancer protein 1... 40 0.006 sp|P81665|PSBO_PINPS Oxygen-evolving enhancer protein 1 (Fragmen... 35 0.16 sp|B0SYJ5|ATKC_CAUSK Potassium-transporting ATPase C chain OS=Ca... 35 0.20 sp|Q6PIF2|SYCE2_HUMAN Synaptonemal complex central element prote... 34 0.35 sp|O36027|WSP1_SCHPO Wiskott-Aldrich syndrome protein homolog 1 ... 32 1.3 sp|Q580R0|CB027_HUMAN Uncharacterized protein C2orf27 OS=Homo sa... 31 2.9 sp|P25558|BUD3_YEAST Bud site selection protein 3 OS=Saccharomyc... 31 3.8 sp|A5DK47|DBP6_PICGU ATP-dependent RNA helicase DBP6 OS=Pichia g... 30 6.5 sp|Q9C4B4|CSG_HALJP Cell surface glycoprotein OS=Haloarcula japo... 30 6.5 sp|P24506|SY62_DISOM Synaptotagmin-B OS=Discopyge ommata GN=P65-... 30 8.5 sp|Q97EJ7|RL15_CLOAB 50S ribosomal protein L15 OS=Clostridium ac... 30 8.5
>sp|P14226|PSBO_PEA Oxygen-evolving enhancer protein 1, chloroplastic OS=Pisum sativum GN=PSBO PE=2 SV=1 Length = 329
Score = 223 bits (569), Expect = 3e-58 Identities = 107/133 (80%), Positives = 118/133 (88%) Frame = -3
Query: 511 TVQLPGGERVPFLFTIKQLVATGKPDAFSGQFLVPSYRGSSFLDPKGRGGSQGYDNAVAI 332 TVQLPGGERVPFLFTIKQLVA+GKPD+FSG+FLVPSYRGSSFLDPKGRG S GYDNAVA+ Sbjct: 196 TVQLPGGERVPFLFTIKQLVASGKPDSFSGEFLVPSYRGSSFLDPKGRGASTGYDNAVAL 255
Query: 331 PAGGAGDEEELAKENNKDTTALNGKITFSVAKTNLETGEIGGVFESVQPSDTDLGYQAPK 152 PAGG GDEEEL KENNK + GKIT SV +T ETGE+ GVFES+QPSDTDLG +APK Sbjct: 256 PAGGRGDEEELGKENNKSAASSKGKITLSVTQTKPETGEVIGVFESIQPSDTDLGAKAPK 315
Query: 151 DVKIQGIWYAQVE 113 DVKIQG+WYAQ+E Sbjct: 316 DVKIQGVWYAQLE 328
>sp|O49079|PSBO_FRIAG Oxygen-evolving enhancer protein 1, chloroplastic OS=Fritillaria agrestis GN=PSBO PE=2 SV=1 Length = 329
Score = 223 bits (568), Expect = 4e-58 Identities = 107/133 (80%), Positives = 119/133 (89%) Frame = -3
Query: 511 TVQLPGGERVPFLFTIKQLVATGKPDAFSGQFLVPSYRGSSFLDPKGRGGSQGYDNAVAI 332 TVQLPGGERVPFLFT+KQLVATGKP++FSG +LVPSYRGSSFLDPKGRGGS GYDNAVA+ Sbjct: 197 TVQLPGGERVPFLFTVKQLVATGKPESFSGSYLVPSYRGSSFLDPKGRGGSAGYDNAVAL 256
Query: 331 PAGGAGDEEELAKENNKDTTALNGKITFSVAKTNLETGEIGGVFESVQPSDTDLGYQAPK 152 PAGG GDEEEL KEN KD ++ GKIT SV K+ ETGE+ GVFES+QPSDTDLG +APK Sbjct: 257 PAGGRGDEEELVKENIKDVSSSTGKITLSVTKSKPETGEVIGVFESIQPSDTDLGSKAPK 316
Query: 151 DVKIQGIWYAQVE 113 DVKIQGIWYAQ+E Sbjct: 317 DVKIQGIWYAQLE 329
>sp|P23322|PSBO_SOLLC Oxygen-evolving enhancer protein 1, chloroplastic OS=Solanum lycopersicum GN=PSBO PE=2 SV=2 Length = 329
Score = 222 bits (566), Expect = 7e-58 Identities = 107/133 (80%), Positives = 120/133 (90%) Frame = -3
Query: 511 TVQLPGGERVPFLFTIKQLVATGKPDAFSGQFLVPSYRGSSFLDPKGRGGSQGYDNAVAI 332 TVQLPGGERVPFLFTIKQLVA+GKP++FSG+FLVPSYRGSSFLDPKGRGGS GYDNAVA+ Sbjct: 197 TVQLPGGERVPFLFTIKQLVASGKPESFSGEFLVPSYRGSSFLDPKGRGGSTGYDNAVAL 256
Query: 331 PAGGAGDEEELAKENNKDTTALNGKITFSVAKTNLETGEIGGVFESVQPSDTDLGYQAPK 152 PAGG GDEEEL KEN K+T +L GKIT SV ++ ETGE+ GVFES+QPSDTDLG + PK Sbjct: 257 PAGGRGDEEELQKENVKNTASLTGKITLSVTQSKPETGEVIGVFESIQPSDTDLGAKVPK 316
Query: 151 DVKIQGIWYAQVE 113 DVKIQGIWYAQ+E Sbjct: 317 DVKIQGIWYAQLE 329
>sp|P26320|PSBO_SOLTU Oxygen-evolving enhancer protein 1, chloroplastic OS=Solanum tuberosum GN=PSBO PE=2 SV=1 Length = 333
Score = 222 bits (565), Expect = 9e-58 Identities = 107/133 (80%), Positives = 120/133 (90%) Frame = -3
Query: 511 TVQLPGGERVPFLFTIKQLVATGKPDAFSGQFLVPSYRGSSFLDPKGRGGSQGYDNAVAI 332 TVQLPGGERVPFLFTIKQLVA+GKP++FS FLVPSYRGSSFLDPKGRGGS GYDNAVA+ Sbjct: 200 TVQLPGGERVPFLFTIKQLVASGKPESFSVDFLVPSYRGSSFLDPKGRGGSTGYDNAVAL 259
Query: 331 PAGGAGDEEELAKENNKDTTALNGKITFSVAKTNLETGEIGGVFESVQPSDTDLGYQAPK 152 PAGG GDEEEL KEN K+T +L GKITF+V K+N +TGE+ GVFES+QPSDTDLG + PK Sbjct: 260 PAGGRGDEEELQKENVKNTASLTGKITFTVTKSNPQTGEVIGVFESIQPSDTDLGAKTPK 319
Query: 151 DVKIQGIWYAQVE 113 DVKIQGIWYAQ+E Sbjct: 320 DVKIQGIWYAQLE 332
>sp|Q40459|PSBO_TOBAC Oxygen-evolving enhancer protein 1, chloroplastic OS=Nicotiana tabacum GN=PSBO PE=2 SV=1 Length = 332
Score = 220 bits (561), Expect = 3e-57 Identities = 106/133 (79%), Positives = 120/133 (90%) Frame = -3
Query: 511 TVQLPGGERVPFLFTIKQLVATGKPDAFSGQFLVPSYRGSSFLDPKGRGGSQGYDNAVAI 332 TVQLPGGERVPFLFTIKQLVA+GKP++FSG+FLVPSYRGSSFLDPKGRGGS GYDNAVA+ Sbjct: 200 TVQLPGGERVPFLFTIKQLVASGKPESFSGEFLVPSYRGSSFLDPKGRGGSTGYDNAVAL 259
Query: 331 PAGGAGDEEELAKENNKDTTALNGKITFSVAKTNLETGEIGGVFESVQPSDTDLGYQAPK 152 PAGG GDEEEL KEN K+T++ GKIT SV ++ ETGE+ GVFES+QPSDTDLG + PK Sbjct: 260 PAGGRGDEEELQKENVKNTSSSTGKITLSVTQSKPETGEVIGVFESIQPSDTDLGAKVPK 319
Query: 151 DVKIQGIWYAQVE 113 DVKIQGIWYAQ+E Sbjct: 320 DVKIQGIWYAQLE 332
>sp|P12359|PSBO_SPIOL Oxygen-evolving enhancer protein 1, chloroplastic OS=Spinacia oleracea GN=PSBO PE=1 SV=1 Length = 332
Score = 214 bits (546), Expect = 1e-55 Identities = 102/133 (76%), Positives = 116/133 (87%) Frame = -3
Query: 511 TVQLPGGERVPFLFTIKQLVATGKPDAFSGQFLVPSYRGSSFLDPKGRGGSQGYDNAVAI 332 TVQLPGGERVPFLFTIKQLVA+GKP++FSG FLVPSYRGSSFLDPKGRGGS GYDNAVA+ Sbjct: 198 TVQLPGGERVPFLFTIKQLVASGKPESFSGDFLVPSYRGSSFLDPKGRGGSTGYDNAVAL 257
Query: 331 PAGGAGDEEELAKENNKDTTALNGKITFSVAKTNLETGEIGGVFESVQPSDTDLGYQAPK 152 PAGG GDEEEL KENNK+ + G IT SV + ETGE+ GVF+S+QPSDTDLG + PK Sbjct: 258 PAGGRGDEEELQKENNKNVASSKGTITLSVTSSKPETGEVIGVFQSLQPSDTDLGAKVPK 317
Query: 151 DVKIQGIWYAQVE 113 DVKI+G+WYAQ+E Sbjct: 318 DVKIEGVWYAQLE 330
>sp|Q9S841|PSBO2_ARATH Oxygen-evolving enhancer protein 1-2, chloroplastic OS=Arabidopsis thaliana GN=PSBO2 PE=1 SV=1 Length = 331
Score = 214 bits (544), Expect = 2e-55 Identities = 101/133 (75%), Positives = 117/133 (87%) Frame = -3
Query: 511 TVQLPGGERVPFLFTIKQLVATGKPDAFSGQFLVPSYRGSSFLDPKGRGGSQGYDNAVAI 332 TVQLPGGERVPFLFT+KQL A+GKP++FSG+FLVPSYRGSSFLDPKGRGGS GYDNAVA+ Sbjct: 199 TVQLPGGERVPFLFTVKQLEASGKPESFSGKFLVPSYRGSSFLDPKGRGGSTGYDNAVAL 258
Query: 331 PAGGAGDEEELAKENNKDTTALNGKITFSVAKTNLETGEIGGVFESVQPSDTDLGYQAPK 152 PAGG GDEEEL+KEN K+T A G+IT + K+ ETGE+ GVFES+QPSDTDLG + PK Sbjct: 259 PAGGRGDEEELSKENVKNTAASVGEITLKITKSKPETGEVIGVFESLQPSDTDLGAKVPK 318
Query: 151 DVKIQGIWYAQVE 113 DVKIQG+WY Q+E Sbjct: 319 DVKIQGVWYGQIE 331
>sp|P23321|PSBO1_ARATH Oxygen-evolving enhancer protein 1-1, chloroplastic OS=Arabidopsis thaliana GN=PSBO1 PE=1 SV=2 Length = 332
Score = 213 bits (542), Expect = 4e-55 Identities = 102/133 (76%), Positives = 116/133 (87%) Frame = -3
Query: 511 TVQLPGGERVPFLFTIKQLVATGKPDAFSGQFLVPSYRGSSFLDPKGRGGSQGYDNAVAI 332 TVQLPGGERVPFLFT+KQL A+GKPD+F+G+FLVPSYRGSSFLDPKGRGGS GYDNAVA+ Sbjct: 200 TVQLPGGERVPFLFTVKQLDASGKPDSFTGKFLVPSYRGSSFLDPKGRGGSTGYDNAVAL 259
Query: 331 PAGGAGDEEELAKENNKDTTALNGKITFSVAKTNLETGEIGGVFESVQPSDTDLGYQAPK 152 PAGG GDEEEL KEN K+T A G+IT V K+ ETGE+ GVFES+QPSDTDLG + PK Sbjct: 260 PAGGRGDEEELVKENVKNTAASVGEITLKVTKSKPETGEVIGVFESLQPSDTDLGAKVPK 319
Query: 151 DVKIQGIWYAQVE 113 DVKIQG+WY Q+E Sbjct: 320 DVKIQGVWYGQLE 332
>sp|P27665|PSBO_WHEAT Oxygen-evolving enhancer protein 1, chloroplastic OS=Triticum aestivum GN=PSBO PE=2 SV=1 Length = 325
Score = 199 bits (505), Expect = 8e-51 Identities = 101/133 (75%), Positives = 113/133 (84%) Frame = -3
Query: 511 TVQLPGGERVPFLFTIKQLVATGKPDAFSGQFLVPSYRGSSFLDPKGRGGSQGYDNAVAI 332 TVQLPGGERV FLFT+KQLVATGKP++F FLVPSYRGSSFLDPKGRGGS GYDNA A+ Sbjct: 194 TVQLPGGERVAFLFTVKQLVATGKPESFR-PFLVPSYRGSSFLDPKGRGGSTGYDNAGAL 252
Query: 331 PAGGAGDEEELAKENNKDTTALNGKITFSVAKTNLETGEIGGVFESVQPSDTDLGYQAPK 152 P GG GDEEELAKEN K+ ++ G IT SV K+ ETGE+ GVFESVQPSDTDL +APK Sbjct: 253 PRGGRGDEEELAKENVKNASSSTGNITLSVTKSKPETGEVIGVFESVQPSDTDL--EAPK 310
Query: 151 DVKIQGIWYAQVE 113 DVKIQG+WYAQ+E Sbjct: 311 DVKIQGVWYAQLE 323
>sp|P46483|PSBO_EUGGR Oxygen-evolving enhancer protein 1, chloroplastic OS=Euglena gracilis GN=PSBO PE=1 SV=2 Length = 338
Score = 186 bits (471), Expect = 7e-47 Identities = 91/132 (68%), Positives = 104/132 (78%) Frame = -3
Query: 511 TVQLPGGERVPFLFTIKQLVATGKPDAFSGQFLVPSYRGSSFLDPKGRGGSQGYDNAVAI 332 TVQL GGERVPFLFTIK L+A G F GQF VPSYRG++FLDPKGRGG+ GYD AVA+ Sbjct: 205 TVQLAGGERVPFLFTIKNLLAKGDAGQFLGQFDVPSYRGATFLDPKGRGGASGYDTAVAL 264
Query: 331 PAGGAGDEEELAKENNKDTTALNGKITFSVAKTNLETGEIGGVFESVQPSDTDLGYQAPK 152 PA +GD+EE AKEN+K T A G I F VAK N ETGEI GVFES+QPSDTDLG + PK Sbjct: 265 PA--SGDDEEYAKENSKSTAASVGTIAFKVAKVNAETGEIAGVFESIQPSDTDLGAKVPK 322
Query: 151 DVKIQGIWYAQV 116 D+K G+WYAQ+ Sbjct: 323 DIKTSGVWYAQI 334
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9U1K9 |
Definition |
tr|A9U1K9|A9U1K9_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
133 |
Score (bit) |
232.0 |
E-value |
7.0e-60 |
Report |
![](http://dbarchive.biosciencedbc.jp/images/togodb/expand.png) |