BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP920904|Adiantum capillus-veneris mRNA, clone:
YMU001_000143_B11.
         (330 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q3KSM3|RDRP_PRV RNA-directed RNA polymerase OS=Pieris rapae v...    32   0.99 
sp|Q0JLC5|PDR3_ORYSJ Pleiotropic drug resistance protein 3 OS=Or...    29   6.5  
sp|A2WSH0|PDR3_ORYSI Pleiotropic drug resistance protein 3 OS=Or...    29   6.5  

>sp|Q3KSM3|RDRP_PRV RNA-directed RNA polymerase OS=Pieris rapae
           virus PE=3 SV=1
          Length = 1014

 Score = 32.0 bits (71), Expect = 0.99
 Identities = 14/36 (38%), Positives = 19/36 (52%)
 Frame = +1

Query: 19  YRLFWLLSLSGCHDSTWGMKPTAWF*SLTFHKSVHQ 126
           +RL WLL  +   D  W + PT W+  L   K+V Q
Sbjct: 303 HRLIWLLPKAKITDPLWIVGPTEWYDKLLVRKTVQQ 338


>sp|Q0JLC5|PDR3_ORYSJ Pleiotropic drug resistance protein 3 OS=Oryza
           sativa subsp. japonica GN=PDR3 PE=2 SV=1
          Length = 1457

 Score = 29.3 bits (64), Expect = 6.5
 Identities = 14/38 (36%), Positives = 21/38 (55%)
 Frame = -2

Query: 260 EKHRVEWVPLEDLPIHDQLTRAIV*EHLKLSPFGGFDG 147
           ++  + W  LE LP +D++ RAI+       P GG DG
Sbjct: 43  DEEALRWAALEKLPTYDRVRRAIL-------PLGGDDG 73


>sp|A2WSH0|PDR3_ORYSI Pleiotropic drug resistance protein 3 OS=Oryza
           sativa subsp. indica GN=PDR3 PE=2 SV=1
          Length = 1457

 Score = 29.3 bits (64), Expect = 6.5
 Identities = 14/38 (36%), Positives = 21/38 (55%)
 Frame = -2

Query: 260 EKHRVEWVPLEDLPIHDQLTRAIV*EHLKLSPFGGFDG 147
           ++  + W  LE LP +D++ RAI+       P GG DG
Sbjct: 43  DEEALRWAALEKLPTYDRVRRAIL-------PLGGDDG 73

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP920904|Adiantum capillus-veneris mRNA, clone:
YMU001_000143_B11.
         (330 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done

 ***** No hits found ******