BP920911 |
Clone id |
YMU001_000143_C06 |
Library |
YMU01 |
Length |
507 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000143_C06. |
Accession |
BP920911 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL529Contig1 |
Sequence |
TTTTTTTTACTCTGCTAAAAGAAATATTTGCACTCATAAAGCTCGCAAAGATGTCAGAAT GTTTCAGTTTGCACTCAATTCAGTAAAACAAAACCGCTGGTAAAATTTGGGATTAAGCTG ATGTGCCTGGTAGCACACTTGTCCAATACAAAATGTAAAAAGCGCTATGTGAGATAGCTC TCTCCTTAGTCTTCATCCTCAGCTTCATTCTCTGCAATATTGAAGTATCTCAATTCGTAC ACATTTCTGTCCTTGTTAGAAGCGATGACTCGGAGCCAATCCCTGACATTGTGCTTTTTC AGGTATTTCTTTGTTAGGTATTTCAAATACCTTTTAGAGAATGCACTCTCGGAAGTAACG CTGATCTTATTCTTCTCACGGGCAATGGAGACAGCGTCGCCGAGAACACCCGCCTTGCCC CCAACCTTGATACGATCCTGCAGGAACTTCTCATACGAGGCGATGTCCATAATCTTGTCC TCGACGGGCTTGCCGTAGTCGATGGTG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9FE58 |
Definition |
sp|Q9FE58|RL223_ARATH 60S ribosomal protein L22-3 OS=Arabidopsis thaliana |
Align length |
97 |
Score (bit) |
132.0 |
E-value |
7.0e-31 |
Report |
 BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP920911|Adiantum capillus-veneris mRNA, clone: YMU001_000143_C06. (507 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|Q9FE58|RL223_ARATH 60S ribosomal protein L22-3 OS=Arabidopsis... 132 7e-31 sp|Q9M9W1|RL222_ARATH 60S ribosomal protein L22-2 OS=Arabidopsis... 131 2e-30 sp|Q9SRX7|RL221_ARATH Putative 60S ribosomal protein L22-1 OS=Ar... 108 1e-23 sp|P47198|RL22_RAT 60S ribosomal protein L22 OS=Rattus norvegicu... 94 5e-19 sp|P67985|RL22_PIG 60S ribosomal protein L22 OS=Sus scrofa GN=RP... 93 8e-19 sp|P67984|RL22_MOUSE 60S ribosomal protein L22 OS=Mus musculus G... 93 8e-19 sp|Q4R5I3|RL22_MACFA 60S ribosomal protein L22 OS=Macaca fascicu... 93 8e-19 sp|P35268|RL22_HUMAN 60S ribosomal protein L22 OS=Homo sapiens G... 93 8e-19 sp|Q98TF8|RL22_CHICK 60S ribosomal protein L22 OS=Gallus gallus ... 93 8e-19 sp|Q90YU6|RL22_ICTPU 60S ribosomal protein L22 OS=Ictalurus punc... 92 1e-18 sp|Q28IL6|RL22_XENTR 60S ribosomal protein L22 OS=Xenopus tropic... 91 4e-18 sp|P50886|RL22_XENLA 60S ribosomal protein L22 OS=Xenopus laevis... 91 4e-18 sp|P13732|RL22_TRIGR 60S ribosomal protein L22 OS=Tripneustes gr... 91 4e-18 sp|Q5I0R6|RL22L_XENTR 60S ribosomal protein L22-like 1 OS=Xenopu... 90 5e-18 sp|P52865|RL22_GADMO 60S ribosomal protein L22 (Fragment) OS=Gad... 90 7e-18 sp|Q9D7S7|RL22L_MOUSE 60S ribosomal protein L22-like 1 OS=Mus mu... 89 2e-17 sp|Q6P5R6|RL22L_HUMAN 60S ribosomal protein L22-like 1 OS=Homo s... 89 2e-17 sp|A4FUH0|RL22L_BOVIN 60S ribosomal protein L22-like 1 OS=Bos ta... 84 3e-16 sp|Q09668|RL22_SCHPO 60S ribosomal protein L22 OS=Schizosaccharo... 81 2e-15 sp|P50887|RL22_DROME 60S ribosomal protein L22 OS=Drosophila mel... 77 4e-14 sp|Q54JE3|RL221_DICDI 60S ribosomal protein L22 1 OS=Dictyosteli... 75 2e-13 sp|Q54GK6|RL222_DICDI 60S ribosomal protein L22 2 OS=Dictyosteli... 72 2e-12 sp|P52819|RL22_CAEEL 60S ribosomal protein L22 OS=Caenorhabditis... 71 3e-12 sp|P05749|RL22A_YEAST 60S ribosomal protein L22-A OS=Saccharomyc... 62 1e-09 sp|P56628|RL22B_YEAST 60S ribosomal protein L22-B OS=Saccharomyc... 62 2e-09 sp|Q07992|BUD28_YEAST Putative uncharacterized protein BUD28 OS=... 49 1e-05 sp|Q9SD46|PER36_ARATH Peroxidase 36 OS=Arabidopsis thaliana GN=P... 32 1.7 sp|A4YJ26|GGGPS_METS5 Geranylgeranylglyceryl phosphate synthase ... 31 2.9
>sp|Q9FE58|RL223_ARATH 60S ribosomal protein L22-3 OS=Arabidopsis thaliana GN=RPL22C PE=2 SV=1 Length = 124
Score = 132 bits (333), Expect = 7e-31 Identities = 67/97 (69%), Positives = 77/97 (79%) Frame = -2
Query: 506 TIDYGKPVEDKIMDIASYEKFLQDRIKVGGKAGVLGDAVSIAREKNKISVTSESAFSXXX 327 TID KPV+DKIM+IAS EKFLQ+RIKVGGKAG LGD+VSI REK+KI+VT++ FS Sbjct: 19 TIDCSKPVDDKIMEIASLEKFLQERIKVGGKAGALGDSVSITREKSKITVTADGQFSKRY 78
Query: 326 XXXXXXXXXXKHNVRDWLRVIASNKDRNVYELRYFNI 216 KHNVRDWLRVIA+NKDRN+YELRYFNI Sbjct: 79 LKYLTKKYLKKHNVRDWLRVIAANKDRNLYELRYFNI 115
>sp|Q9M9W1|RL222_ARATH 60S ribosomal protein L22-2 OS=Arabidopsis thaliana GN=RPL22B PE=2 SV=1 Length = 124
Score = 131 bits (330), Expect = 2e-30 Identities = 66/97 (68%), Positives = 77/97 (79%) Frame = -2
Query: 506 TIDYGKPVEDKIMDIASYEKFLQDRIKVGGKAGVLGDAVSIAREKNKISVTSESAFSXXX 327 TID KPV+DKIM+IAS EKFLQ+RIKVGGKAG LGD+V+I REK+KI+VT++ FS Sbjct: 19 TIDCSKPVDDKIMEIASLEKFLQERIKVGGKAGALGDSVTITREKSKITVTADGQFSKRY 78
Query: 326 XXXXXXXXXXKHNVRDWLRVIASNKDRNVYELRYFNI 216 KHNVRDWLRVIA+NKDRN+YELRYFNI Sbjct: 79 LKYLTKKYLKKHNVRDWLRVIAANKDRNLYELRYFNI 115
>sp|Q9SRX7|RL221_ARATH Putative 60S ribosomal protein L22-1 OS=Arabidopsis thaliana GN=RPL22A PE=2 SV=1 Length = 127
Score = 108 bits (271), Expect = 1e-23 Identities = 56/96 (58%), Positives = 69/96 (71%) Frame = -2
Query: 503 IDYGKPVEDKIMDIASYEKFLQDRIKVGGKAGVLGDAVSIAREKNKISVTSESAFSXXXX 324 ID KPV+D I++IA+ EKFLQ+RIKV GKAG LG++VSI R KI+V + S FS Sbjct: 22 IDCSKPVDDTILEIATLEKFLQERIKVRGKAGALGNSVSITRYNGKINVNANSNFSKRYL 81
Query: 323 XXXXXXXXXKHNVRDWLRVIASNKDRNVYELRYFNI 216 K+N+RDWLRVIASNKD+NVYE+RYF I Sbjct: 82 KYLTKKYLKKYNLRDWLRVIASNKDKNVYEVRYFRI 117
>sp|P47198|RL22_RAT 60S ribosomal protein L22 OS=Rattus norvegicus GN=Rpl22 PE=2 SV=2 Length = 128
Score = 93.6 bits (231), Expect = 5e-19 Identities = 53/98 (54%), Positives = 67/98 (68%), Gaps = 1/98 (1%) Frame = -2
Query: 506 TIDYGKPVEDKIMDIASYEKFLQDRIKVGGKAGVL-GDAVSIAREKNKISVTSESAFSXX 330 T+D PVED IMD A++E+FLQ+RIKV GKAG L G V+I R K+KI+VTSE FS Sbjct: 22 TLDCTHPVEDGIMDAANFEQFLQERIKVNGKAGNLGGGVVTIERSKSKITVTSEEPFSKR 81
Query: 329 XXXXXXXXXXXKHNVRDWLRVIASNKDRNVYELRYFNI 216 K+N+RDWLRV+A++K+ YELRYF I Sbjct: 82 YLKYLTKKYLKKNNLRDWLRVVANSKES--YELRYFQI 117
>sp|P67985|RL22_PIG 60S ribosomal protein L22 OS=Sus scrofa GN=RPL22 PE=2 SV=2 Length = 128
Score = 92.8 bits (229), Expect = 8e-19 Identities = 53/98 (54%), Positives = 67/98 (68%), Gaps = 1/98 (1%) Frame = -2
Query: 506 TIDYGKPVEDKIMDIASYEKFLQDRIKVGGKAGVL-GDAVSIAREKNKISVTSESAFSXX 330 T+D PVED IMD A++E+FLQ+RIKV GKAG L G V+I R K+KI+VTSE FS Sbjct: 22 TLDCTHPVEDGIMDAANFEQFLQERIKVNGKAGNLGGGVVTIERSKSKITVTSEVPFSKR 81
Query: 329 XXXXXXXXXXXKHNVRDWLRVIASNKDRNVYELRYFNI 216 K+N+RDWLRV+A++K+ YELRYF I Sbjct: 82 YLKYLTKKYLKKNNLRDWLRVVANSKES--YELRYFQI 117
>sp|P67984|RL22_MOUSE 60S ribosomal protein L22 OS=Mus musculus GN=Rpl22 PE=2 SV=2 Length = 128
Score = 92.8 bits (229), Expect = 8e-19 Identities = 53/98 (54%), Positives = 67/98 (68%), Gaps = 1/98 (1%) Frame = -2
Query: 506 TIDYGKPVEDKIMDIASYEKFLQDRIKVGGKAGVL-GDAVSIAREKNKISVTSESAFSXX 330 T+D PVED IMD A++E+FLQ+RIKV GKAG L G V+I R K+KI+VTSE FS Sbjct: 22 TLDCTHPVEDGIMDAANFEQFLQERIKVNGKAGNLGGGVVTIERSKSKITVTSEVPFSKR 81
Query: 329 XXXXXXXXXXXKHNVRDWLRVIASNKDRNVYELRYFNI 216 K+N+RDWLRV+A++K+ YELRYF I Sbjct: 82 YLKYLTKKYLKKNNLRDWLRVVANSKES--YELRYFQI 117
>sp|Q4R5I3|RL22_MACFA 60S ribosomal protein L22 OS=Macaca fascicularis GN=RPL22 PE=2 SV=3 Length = 128
Score = 92.8 bits (229), Expect = 8e-19 Identities = 53/98 (54%), Positives = 67/98 (68%), Gaps = 1/98 (1%) Frame = -2
Query: 506 TIDYGKPVEDKIMDIASYEKFLQDRIKVGGKAGVL-GDAVSIAREKNKISVTSESAFSXX 330 T+D PVED IMD A++E+FLQ+RIKV GKAG L G V+I R K+KI+VTSE FS Sbjct: 22 TLDCTHPVEDGIMDAANFEQFLQERIKVNGKAGNLGGGVVTIERSKSKITVTSEVPFSKR 81
Query: 329 XXXXXXXXXXXKHNVRDWLRVIASNKDRNVYELRYFNI 216 K+N+RDWLRV+A++K+ YELRYF I Sbjct: 82 YLKYLTKKYLKKNNLRDWLRVVANSKES--YELRYFQI 117
>sp|P35268|RL22_HUMAN 60S ribosomal protein L22 OS=Homo sapiens GN=RPL22 PE=1 SV=2 Length = 128
Score = 92.8 bits (229), Expect = 8e-19 Identities = 53/98 (54%), Positives = 67/98 (68%), Gaps = 1/98 (1%) Frame = -2
Query: 506 TIDYGKPVEDKIMDIASYEKFLQDRIKVGGKAGVL-GDAVSIAREKNKISVTSESAFSXX 330 T+D PVED IMD A++E+FLQ+RIKV GKAG L G V+I R K+KI+VTSE FS Sbjct: 22 TLDCTHPVEDGIMDAANFEQFLQERIKVNGKAGNLGGGVVTIERSKSKITVTSEVPFSKR 81
Query: 329 XXXXXXXXXXXKHNVRDWLRVIASNKDRNVYELRYFNI 216 K+N+RDWLRV+A++K+ YELRYF I Sbjct: 82 YLKYLTKKYLKKNNLRDWLRVVANSKES--YELRYFQI 117
>sp|Q98TF8|RL22_CHICK 60S ribosomal protein L22 OS=Gallus gallus GN=RPL22 PE=2 SV=1 Length = 128
Score = 92.8 bits (229), Expect = 8e-19 Identities = 53/98 (54%), Positives = 67/98 (68%), Gaps = 1/98 (1%) Frame = -2
Query: 506 TIDYGKPVEDKIMDIASYEKFLQDRIKVGGKAGVL-GDAVSIAREKNKISVTSESAFSXX 330 T+D PVED IMD A++E+FLQ+RIKV GKAG L G V+I R K+KI+VTSE FS Sbjct: 22 TLDCTHPVEDGIMDAANFEQFLQERIKVNGKAGNLGGGVVTIERSKSKITVTSEVPFSKR 81
Query: 329 XXXXXXXXXXXKHNVRDWLRVIASNKDRNVYELRYFNI 216 K+N+RDWLRV+A++K+ YELRYF I Sbjct: 82 YLKYLTKKYLKKNNLRDWLRVVANSKES--YELRYFQI 117
>sp|Q90YU6|RL22_ICTPU 60S ribosomal protein L22 OS=Ictalurus punctatus GN=rpl22 PE=2 SV=3 Length = 128
Score = 92.4 bits (228), Expect = 1e-18 Identities = 53/98 (54%), Positives = 66/98 (67%), Gaps = 1/98 (1%) Frame = -2
Query: 506 TIDYGKPVEDKIMDIASYEKFLQDRIKVGGKAGVL-GDAVSIAREKNKISVTSESAFSXX 330 T+D PVED IMD A++E+FLQ+RIKV GKAG L G VSI R K+KI+VTS+ FS Sbjct: 22 TLDCTHPVEDGIMDAANFEQFLQERIKVNGKAGNLGGGVVSIERSKSKITVTSDIPFSKR 81
Query: 329 XXXXXXXXXXXKHNVRDWLRVIASNKDRNVYELRYFNI 216 K+N+RDWLRV+A+ K+ YELRYF I Sbjct: 82 YLKYLTKKYLKKNNLRDWLRVVANTKES--YELRYFQI 117
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9S086 |
Definition |
tr|A9S086|A9S086_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
97 |
Score (bit) |
147.0 |
E-value |
4.0e-34 |
Report |
 |