BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP920914|Adiantum capillus-veneris mRNA, clone:
YMU001_000143_C09.
         (582 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P42500|PHYA_SOYBN Phytochrome A OS=Glycine max GN=PHYA PE=2 SV=1    31   3.9  
sp|P39141|NUPC_BACSU Pyrimidine nucleoside transport protein OS=...    31   5.1  
sp|Q61555|FBN2_MOUSE Fibrillin-2 OS=Mus musculus GN=Fbn2 PE=2 SV=1     31   5.2  
sp|Q9H714|CM018_HUMAN Uncharacterized protein C13orf18 OS=Homo s...    31   5.2  

>sp|P42500|PHYA_SOYBN Phytochrome A OS=Glycine max GN=PHYA PE=2 SV=1
          Length = 1131

 Score = 31.2 bits (69), Expect = 3.9
 Identities = 15/36 (41%), Positives = 23/36 (63%)
 Frame = +3

Query: 24  GKIEREIDEVCGQPYRGLQESSQELPSAHRSEFLYR 131
           G++ REI + C +PY GL   + ++P A  S FL+R
Sbjct: 249 GEVIREITKPCLEPYLGLHYPATDIPQA--SRFLFR 282


>sp|P39141|NUPC_BACSU Pyrimidine nucleoside transport protein
           OS=Bacillus subtilis GN=nupC PE=3 SV=3
          Length = 393

 Score = 30.8 bits (68), Expect = 5.1
 Identities = 24/53 (45%), Positives = 27/53 (50%), Gaps = 3/53 (5%)
 Frame = +2

Query: 392 NFLV---QNGAGFELYDFVEGIVF*FGVQVGLKLKTQRLFFMTVLGSVVFFTA 541
           NFLV     G G+ L    EGI F FG   GL    Q  FFM VL  +VF +A
Sbjct: 53  NFLVGGFAKGFGYLLEYAAEGINFVFG---GLVNADQTTFFMNVLLPIVFISA 102


>sp|Q61555|FBN2_MOUSE Fibrillin-2 OS=Mus musculus GN=Fbn2 PE=2 SV=1
          Length = 2907

 Score = 30.8 bits (68), Expect = 5.2
 Identities = 18/71 (25%), Positives = 27/71 (38%), Gaps = 5/71 (7%)
 Frame = -1

Query: 246 CINLTMLPCLWMLQAPTCRRCSRCKACPKRENDVHCR-----LICRGTLICEH*EALESS 82
           CI      C++    P C R  R   C  + N+  C+     ++C  TL C         
Sbjct: 190 CIGPNRCACVYGFTGPQCERDYRTGPCFTQVNNQMCQGQLTGIVCTKTLCCATIGRAWGH 249

Query: 81  PASLCMAVHKP 49
           P  +C A  +P
Sbjct: 250 PCEMCPAQPQP 260


>sp|Q9H714|CM018_HUMAN Uncharacterized protein C13orf18 OS=Homo
           sapiens GN=C13orf18 PE=2 SV=3
          Length = 662

 Score = 30.8 bits (68), Expect = 5.2
 Identities = 13/27 (48%), Positives = 17/27 (62%)
 Frame = -1

Query: 246 CINLTMLPCLWMLQAPTCRRCSRCKAC 166
           C N T++   +  Q  TCRRCS C+AC
Sbjct: 607 CQNTTVI---FPFQTATCRRCSACRAC 630

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP920914|Adiantum capillus-veneris mRNA, clone:
YMU001_000143_C09.
         (582 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B3VKY6|B3VKY6_MOUSE CRS4C-3f (Fragment) OS=Mus musculus PE=2 ...    33   9.0  
tr|B4L4X9|B4L4X9_DROMO GI14771 OS=Drosophila mojavensis GN=GI147...    33   9.0  

>tr|B3VKY6|B3VKY6_MOUSE CRS4C-3f (Fragment) OS=Mus musculus PE=2
           SV=1
          Length = 38

 Score = 33.5 bits (75), Expect = 9.0
 Identities = 11/20 (55%), Positives = 11/20 (55%)
 Frame = -1

Query: 222 CLWMLQAPTCRRCSRCKACP 163
           C W    P CRRC RC  CP
Sbjct: 12  CPWCPPCPNCRRCPRCPTCP 31


>tr|B4L4X9|B4L4X9_DROMO GI14771 OS=Drosophila mojavensis GN=GI14771
           PE=4 SV=1
          Length = 1027

 Score = 33.5 bits (75), Expect = 9.0
 Identities = 17/60 (28%), Positives = 33/60 (55%), Gaps = 3/60 (5%)
 Frame = -1

Query: 219 LWMLQAPTCRRCSRCKACPKRENDVHCRLICRGTLIC---EH*EALESSPASLCMAVHKP 49
           +W+  A  C+ C+ C  C K+     C   C+   +C   ++  ++ ++P++L MAV+KP
Sbjct: 741 IWLKDAMQCKDCTMC--CHKK-----CIAKCQSATVCGPVDYGGSIPNTPSTLSMAVNKP 793