NBDC - アーカイブトップ - ヘルプ
データベースの説明 | データ項目の説明 | ダウンロード | 利用許諾 | ヘルプ
AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
Description of this DB | Description of data items | Download | License
AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP920919
Clone id YMU001_000143_D04
Library
Length 510
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000143_D04.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
CAGAGCAAAGGGAGAGTGATTGTACGCAGTATTCAGTATGGCCATCTCCATAGCCGCTTC
CTCGGCAGTTGTCGCTCCTATGCTGCGCCCCCGCAGAGAGCTTGTCAAAGAGCTTCTCTG
GTCTCAAGGCCACTACCCTGTTCGCCCCCAAGAGCCCCAACCCGCTCGCCATCTCTAATG
GCAGCCGTGTGAGCGCCATGCTTGTGTGGAAGCCGTATGACAACAAGAAGTTCGAGACTC
TGTCCTACTTGCCGCCTTTGTCAAGTGAGCAGATTGCGAAGCAGGTGGACTTCATGGTCC
GAAAAGGCTGGACCCCTTGCATTGAGTTCGACAAAATCGGGAGCGTGTACCGAGAGCACT
TCCACGGCAGCAGCTACTACGATGGGCGGTACTGGGTGATGTGGAAGCTGCCCATGTTTG
GCTGCCAAGATGCCGCTGCTGTGCTGCGTGAAATTGCAGAGTGCGCCAAGGAGTATCCTG
AAGCCTTCATCCGCGTGCTGGGCTTTGACG
■■Homology search results ■■ -
sp_hit_id Q40250
Definition sp|Q40250|RBS_LACSA Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Lactuca sativa
Align length 142
Score (bit) 172.0
E-value 8.0e-43
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP920919|Adiantum capillus-veneris mRNA, clone:
YMU001_000143_D04.
         (510 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q40250|RBS_LACSA Ribulose bisphosphate carboxylase small chai...   172   8e-43
sp|P05348|RBS_MAIZE Ribulose bisphosphate carboxylase small chai...   169   9e-42
sp|P08705|RBS_HELAN Ribulose bisphosphate carboxylase small chai...   167   3e-41
sp|O48550|RBS_ZANAE Ribulose bisphosphate carboxylase small chai...   167   3e-41
sp|P17673|RBS_TRIRP Ribulose bisphosphate carboxylase small chai...   167   3e-41
sp|Q96542|RBS_BETVE Ribulose bisphosphate carboxylase small chai...   167   3e-41
sp|P24007|RBS_PYRPY Ribulose bisphosphate carboxylase small chai...   166   4e-41
sp|P10053|RBS_PINTH Ribulose bisphosphate carboxylase small chai...   166   4e-41
sp|O65349|RBS_CAPAN Ribulose bisphosphate carboxylase small chai...   166   4e-41
sp|P19311|RBS5_LEMGI Ribulose bisphosphate carboxylase small cha...   166   6e-41
sp|P10795|RBS1A_ARATH Ribulose bisphosphate carboxylase small ch...   166   8e-41
sp|P19312|RBS6_LEMGI Ribulose bisphosphate carboxylase small cha...   165   1e-40
sp|P10797|RBS2B_ARATH Ribulose bisphosphate carboxylase small ch...   164   2e-40
sp|P00871|RBS1_WHEAT Ribulose bisphosphate carboxylase small cha...   164   2e-40
sp|O24634|RBS1_FRIAG Ribulose bisphosphate carboxylase small cha...   164   2e-40
sp|O65194|RBS_MEDSA Ribulose bisphosphate carboxylase small chai...   164   3e-40
sp|Q40004|RBS_HORVU Ribulose bisphosphate carboxylase small chai...   164   3e-40
sp|Q43832|RBS2_SPIOL Ribulose bisphosphate carboxylase small cha...   163   4e-40
sp|P10796|RBS1B_ARATH Ribulose bisphosphate carboxylase small ch...   163   4e-40
sp|P10798|RBS3B_ARATH Ribulose bisphosphate carboxylase small ch...   163   5e-40
sp|P19308|RBS2_LEMGI Ribulose bisphosphate carboxylase small cha...   163   5e-40
sp|P19310|RBS4_LEMGI Ribulose bisphosphate carboxylase small cha...   162   6e-40
sp|Q39746|RBS4_FLAPR Ribulose bisphosphate carboxylase small cha...   162   6e-40
sp|P26667|RBS2_WHEAT Ribulose bisphosphate carboxylase small cha...   162   6e-40
sp|P19309|RBS3_LEMGI Ribulose bisphosphate carboxylase small cha...   162   8e-40
sp|O64416|RBS_MARPA Ribulose bisphosphate carboxylase small chai...   162   1e-39
sp|Q02980|RBS_MALSP Ribulose bisphosphate carboxylase small chai...   162   1e-39
sp|P05346|RBS1_BRANA Ribulose bisphosphate carboxylase small cha...   162   1e-39
sp|P16031|RBS_LARLA Ribulose bisphosphate carboxylase small chai...   161   1e-39
sp|P07089|RBS_FLATR Ribulose bisphosphate carboxylase small chai...   161   1e-39

>sp|Q40250|RBS_LACSA Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Lactuca sativa GN=RBCS PE=2 SV=1
          Length = 181

 Score =  172 bits (436), Expect = 8e-43
 Identities = 80/142 (56%), Positives = 101/142 (71%), Gaps = 5/142 (3%)
 Frame = +3

Query: 99  SLSKSFSGLKATTLF--APKSPNPLAI--SNGSRVSAMLVWKPYDNKKFETLSYLPPLSS 266
           SL+  F+GLK+   F    K+ N  +   SNG RV  M VW P   KK+ETLSYLPPLS 
Sbjct: 21  SLAAPFTGLKSNVAFPVTKKANNDFSSLPSNGGRVQCMKVWPPIGLKKYETLSYLPPLSD 80

Query: 267 EQIAKQVDFMVRKGWTPCIEFD-KIGSVYREHFHGSSYYDGRYWVMWKLPMFGCQDAAAV 443
           E ++K++D+++R  W PC+EF+ + G VYREH H   YYDGRYW MWKLPMFGC D+A V
Sbjct: 81  EALSKEIDYLIRNKWIPCLEFELEHGFVYREHHHSPGYYDGRYWTMWKLPMFGCTDSAQV 140

Query: 444 LREIAECAKEYPEAFIRVLGFD 509
           ++E+ EC KEYP AFIRV+GFD
Sbjct: 141 MKEVGECKKEYPNAFIRVIGFD 162


>sp|P05348|RBS_MAIZE Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Zea mays GN=RBCS PE=1 SV=1
          Length = 170

 Score =  169 bits (427), Expect = 9e-42
 Identities = 78/135 (57%), Positives = 95/135 (70%), Gaps = 3/135 (2%)
 Frame = +3

Query: 114 FSGLKATTLF--APKSPNPLA-ISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQ 284
           F GLK+T     A +S   L  +SNG R+  M VW  Y NKKFETLSYLPPLS++ + KQ
Sbjct: 17  FQGLKSTASLPVARRSSRSLGNVSNGGRIRCMQVWPAYGNKKFETLSYLPPLSTDDLLKQ 76

Query: 285 VDFMVRKGWTPCIEFDKIGSVYREHFHGSSYYDGRYWVMWKLPMFGCQDAAAVLREIAEC 464
           VD+++R GW PC+EF K+G VYRE+     YYDGRYW MWKLPMFGC DA  V +E+ E 
Sbjct: 77  VDYLLRNGWIPCLEFSKVGFVYRENSTSPCYYDGRYWTMWKLPMFGCNDATQVYKELQEA 136

Query: 465 AKEYPEAFIRVLGFD 509
            K YP+AF RV+GFD
Sbjct: 137 IKSYPDAFHRVIGFD 151


>sp|P08705|RBS_HELAN Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Helianthus annuus GN=RBCS PE=2 SV=1
          Length = 178

 Score =  167 bits (423), Expect = 3e-41
 Identities = 80/146 (54%), Positives = 105/146 (71%), Gaps = 5/146 (3%)
 Frame = +3

Query: 87  APAES-LSKSFSGLKATTLF-APKSPNPLAI--SNGSRVSAMLVWKPYDNKKFETLSYLP 254
           APA++ +   F+GLK+   F   K  N  +   SNG RV  M VW P   KK+ETLSYLP
Sbjct: 15  APAQANMVAPFTGLKSNAAFPTTKKANDFSTLPSNGGRVQCMKVWPPLGLKKYETLSYLP 74

Query: 255 PLSSEQIAKQVDFMVRKGWTPCIEFD-KIGSVYREHFHGSSYYDGRYWVMWKLPMFGCQD 431
           PL+  Q+AK+VD+++RK W PC+EF+ + G VYRE+     YYDGRYW MWKLPMFGC D
Sbjct: 75  PLTETQLAKEVDYLLRKKWVPCLEFELEHGFVYRENARSPGYYDGRYWTMWKLPMFGCTD 134

Query: 432 AAAVLREIAECAKEYPEAFIRVLGFD 509
           +A V++E+AEC KEYP+A+IR++GFD
Sbjct: 135 SAQVMKELAECKKEYPQAWIRIIGFD 160


>sp|O48550|RBS_ZANAE Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Zantedeschia aethiopica GN=RBCS PE=2
           SV=1
          Length = 178

 Score =  167 bits (422), Expect = 3e-41
 Identities = 80/148 (54%), Positives = 103/148 (69%), Gaps = 7/148 (4%)
 Frame = +3

Query: 87  APAES-LSKSFSGLKA------TTLFAPKSPNPLAISNGSRVSAMLVWKPYDNKKFETLS 245
           +PA+S +   F+GL +      T  FA  S  P   SNG RV  M VW P   KKFETLS
Sbjct: 16  SPAQSNMVVPFAGLHSSAAFPVTRKFADSSKLP---SNGLRVRCMQVWPPEGKKKFETLS 72

Query: 246 YLPPLSSEQIAKQVDFMVRKGWTPCIEFDKIGSVYREHFHGSSYYDGRYWVMWKLPMFGC 425
           YLPPL+ EQ+ ++VD+++R GW PCIEF K+G VYRE+ +   YYDGRYW MWKLPMFGC
Sbjct: 73  YLPPLTREQLGQEVDYLIRNGWIPCIEFCKVGFVYREYHNSPGYYDGRYWTMWKLPMFGC 132

Query: 426 QDAAAVLREIAECAKEYPEAFIRVLGFD 509
            D++ VL+E+ EC+K YP+ F R++GFD
Sbjct: 133 TDSSQVLKEVDECSKAYPDYFNRIIGFD 160


>sp|P17673|RBS_TRIRP Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Trifolium repens GN=RBCS PE=3 SV=1
          Length = 178

 Score =  167 bits (422), Expect = 3e-41
 Identities = 80/146 (54%), Positives = 107/146 (73%), Gaps = 5/146 (3%)
 Frame = +3

Query: 87  APAES-LSKSFSGLKATTLF-APKSPNPLA--ISNGSRVSAMLVWKPYDNKKFETLSYLP 254
           AP ++ L+  F+GLK++  F   K  N +    SNGSRV+ M VW P   KKFETLSYLP
Sbjct: 15  APVQANLATPFTGLKSSAGFPVTKKNNDITSITSNGSRVNCMQVWPPVGKKKFETLSYLP 74

Query: 255 PLSSEQIAKQVDFMVRKGWTPCIEFD-KIGSVYREHFHGSSYYDGRYWVMWKLPMFGCQD 431
           PL+ EQ+ K+V++++RKGW PC+EF+ + G V+R++     YYDGRYW MW+LP+FG  D
Sbjct: 75  PLTDEQLLKEVEYLLRKGWVPCVEFELEKGFVHRQYNSSPGYYDGRYWTMWRLPLFGTTD 134

Query: 432 AAAVLREIAECAKEYPEAFIRVLGFD 509
           AA VL+E+AEC  EYPEAFIR++GFD
Sbjct: 135 AAQVLKEVAECKAEYPEAFIRIIGFD 160


>sp|Q96542|RBS_BETVE Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Betula verrucosa GN=RBCS1 PE=2 SV=1
          Length = 182

 Score =  167 bits (422), Expect = 3e-41
 Identities = 83/147 (56%), Positives = 105/147 (71%), Gaps = 6/147 (4%)
 Frame = +3

Query: 87  APAES-LSKSFSGLKATTLF--APKSPNPLA--ISNGSRVSAMLVWKPYDNKKFETLSYL 251
           +PA+S +   F+ LK+T+ F    K+ N +    SNG RV  M VW P   KKFETLSYL
Sbjct: 18  SPAQSSMVAPFTCLKSTSAFPVTQKTNNDITSIASNGGRVQCMQVWPPLGLKKFETLSYL 77

Query: 252 PPLSSEQIAKQVDFMVRKGWTPCIEFD-KIGSVYREHFHGSSYYDGRYWVMWKLPMFGCQ 428
           PPLSSEQ+AK+VD+++RK   PC+EF+ + G VYREH     YYDGRYW MWKLPMFGC 
Sbjct: 78  PPLSSEQLAKEVDYLLRKNLIPCLEFELEHGFVYREHNRSPGYYDGRYWTMWKLPMFGCN 137

Query: 429 DAAAVLREIAECAKEYPEAFIRVLGFD 509
           D++ VL+E+ EC K YP AFIR++GFD
Sbjct: 138 DSSQVLKELEECKKAYPSAFIRIIGFD 164


>sp|P24007|RBS_PYRPY Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Pyrus pyrifolia GN=RBCS PE=2 SV=1
          Length = 183

 Score =  166 bits (421), Expect = 4e-41
 Identities = 81/146 (55%), Positives = 107/146 (73%), Gaps = 5/146 (3%)
 Frame = +3

Query: 87  APAES-LSKSFSGLKATTLF--APKSPNPLAI-SNGSRVSAMLVWKPYDNKKFETLSYLP 254
           APA++ +   F+GLK+++ F    KS +  +I SNG RV  M VW P   KKFETLSYLP
Sbjct: 20  APAQARMVAPFNGLKSSSAFPVTRKSNDITSIASNGGRVQCMQVWPPLGLKKFETLSYLP 79

Query: 255 PLSSEQIAKQVDFMVRKGWTPCIEFD-KIGSVYREHFHGSSYYDGRYWVMWKLPMFGCQD 431
           PLSSE +AK+VD+++RK W PC+EF+ + G VYRE+     YYDGRYW MWKLPMFGC D
Sbjct: 80  PLSSESLAKEVDYLLRKNWVPCLEFELETGFVYRENHRSPGYYDGRYWTMWKLPMFGCTD 139

Query: 432 AAAVLREIAECAKEYPEAFIRVLGFD 509
           ++ VL+E+ E  K YP++FIR++GFD
Sbjct: 140 SSQVLKELEEAKKAYPQSFIRIIGFD 165


>sp|P10053|RBS_PINTH Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Pinus thunbergii GN=RBCS PE=2 SV=1
          Length = 171

 Score =  166 bits (421), Expect = 4e-41
 Identities = 79/149 (53%), Positives = 102/149 (68%), Gaps = 8/149 (5%)
 Frame = +3

Query: 87  APAESLSKSFSGLKATTLFAP--KSPNPLA------ISNGSRVSAMLVWKPYDNKKFETL 242
           A A ++  +F+GLK+T  F    K  N  A       SNG RV  M VW P+ N KFETL
Sbjct: 7   AGAATVVSAFTGLKSTAQFPSSFKMSNAAAEWEQKTTSNGGRVRCMQVWPPFGNPKFETL 66

Query: 243 SYLPPLSSEQIAKQVDFMVRKGWTPCIEFDKIGSVYREHFHGSSYYDGRYWVMWKLPMFG 422
           SYLP L+ EQ+ K+V++++R  W PC+EFD  GS+ R++     YYDGRYWVMWKLPMFG
Sbjct: 67  SYLPTLTEEQLVKEVEYLLRNKWVPCLEFDLEGSISRKYNRSPGYYDGRYWVMWKLPMFG 126

Query: 423 CQDAAAVLREIAECAKEYPEAFIRVLGFD 509
           C +A+ V+ E+ ECAK YP+AFIRV+GFD
Sbjct: 127 CTEASQVINEVRECAKAYPKAFIRVIGFD 155


>sp|O65349|RBS_CAPAN Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Capsicum annuum GN=RBCS PE=2 SV=1
          Length = 187

 Score =  166 bits (421), Expect = 4e-41
 Identities = 78/146 (53%), Positives = 99/146 (67%), Gaps = 5/146 (3%)
 Frame = +3

Query: 87  APAESLSKSFSGLKATTLFAPKSPNPLAI----SNGSRVSAMLVWKPYDNKKFETLSYLP 254
           A   S+  SF+GLK+   F       L I    SNG RV  MLVW P + KK+ETLSYLP
Sbjct: 17  AAQASMIASFNGLKSAASFPVTRKQDLDITSIASNGGRVECMLVWPPINKKKYETLSYLP 76

Query: 255 PLSSEQIAKQVDFMVRKGWTPCIEFD-KIGSVYREHFHGSSYYDGRYWVMWKLPMFGCQD 431
            LS EQ+ K+++++++KGW PC+EF+ + G VYREH     YYDGRYW MWKLPMFGC D
Sbjct: 77  DLSDEQLLKEIEYLLQKGWVPCLEFETEHGFVYREHHRSPGYYDGRYWTMWKLPMFGCTD 136

Query: 432 AAAVLREIAECAKEYPEAFIRVLGFD 509
           A  VL E+ E  K YP+A+IR++GFD
Sbjct: 137 ATQVLNEVQEAKKAYPQAWIRIIGFD 162


>sp|P19311|RBS5_LEMGI Ribulose bisphosphate carboxylase small chain
           SSU5A, chloroplastic OS=Lemna gibba GN=SSU5A PE=3 SV=1
          Length = 177

 Score =  166 bits (420), Expect = 6e-41
 Identities = 81/145 (55%), Positives = 101/145 (69%), Gaps = 5/145 (3%)
 Frame = +3

Query: 90  PAES-LSKSFSGLKATTLFAP--KSPNPLAI--SNGSRVSAMLVWKPYDNKKFETLSYLP 254
           PA+S +   F+GL+++  F    K+ N L+   SNG RVS M VW P   KKFETLSYLP
Sbjct: 17  PAQSSMVAPFNGLRSSVAFPATRKANNDLSTLPSNGGRVSCMQVWPPEGLKKFETLSYLP 76

Query: 255 PLSSEQIAKQVDFMVRKGWTPCIEFDKIGSVYREHFHGSSYYDGRYWVMWKLPMFGCQDA 434
           PLS E +AK+VD+++R  W PCIEF K G VYRE+     YYDGRYW MWKLPMFGC DA
Sbjct: 77  PLSVEDLAKEVDYLLRNDWVPCIEFSKEGFVYRENHASPGYYDGRYWTMWKLPMFGCTDA 136

Query: 435 AAVLREIAECAKEYPEAFIRVLGFD 509
           + V+ E+ E  K YPE F+R++GFD
Sbjct: 137 SQVIAEVEEAKKAYPEYFVRIIGFD 161
tr_hit_id Q43110
Definition tr|Q43110|Q43110_PTEVI Ribulose bisphosphate carboxylase small chain OS=Pteris vittata
Align length 143
Score (bit) 269.0
E-value 5.0e-71
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP920919|Adiantum capillus-veneris mRNA, clone:
YMU001_000143_D04.
         (510 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q43110|Q43110_PTEVI Ribulose bisphosphate carboxylase small c...   269   5e-71
tr|A9T3W5|A9T3W5_PHYPA Ribulose bisphosphate carboxylase small c...   181   1e-44
tr|Q9SXH1|Q9SXH1_PHYPA Ribulose bisphosphate carboxylase small c...   181   2e-44
tr|A9T3X7|A9T3X7_PHYPA Ribulose bisphosphate carboxylase small c...   178   1e-43
tr|Q75WT7|Q75WT7_PHYPA Ribulose bisphosphate carboxylase small c...   177   2e-43
tr|A9TCL7|A9TCL7_PHYPA Ribulose bisphosphate carboxylase small c...   177   3e-43
tr|A9TT85|A9TT85_PHYPA Ribulose bisphosphate carboxylase small c...   174   2e-42
tr|Q9SEB9|Q9SEB9_LACSA Ribulose bisphosphate carboxylase small c...   173   5e-42
tr|A9RJ57|A9RJ57_PHYPA Ribulose bisphosphate carboxylase small c...   172   6e-42
tr|Q3LFQ4|Q3LFQ4_PANGI Ribulose bisphosphate carboxylase small c...   172   1e-41
tr|A9TKI7|A9TKI7_PHYPA Ribulose bisphosphate carboxylase small c...   172   1e-41
tr|A9S3R8|A9S3R8_PHYPA Ribulose bisphosphate carboxylase small c...   172   1e-41
tr|Q5I8Y4|Q5I8Y4_9FABA Ribulose bisphosphate carboxylase small c...   169   7e-41
tr|A9T9D5|A9T9D5_PHYPA Ribulose bisphosphate carboxylase small c...   169   7e-41
tr|A0FIP7|A0FIP7_CAMSI Ribulose bisphosphate carboxylase small c...   169   7e-41
tr|B4FSJ3|B4FSJ3_MAIZE Putative uncharacterized protein OS=Zea m...   169   9e-41
tr|A9TWU8|A9TWU8_PHYPA Ribulose bisphosphate carboxylase small c...   168   1e-40
tr|A9SRS0|A9SRS0_PHYPA Ribulose bisphosphate carboxylase small c...   168   2e-40
tr|A9TVU8|A9TVU8_PHYPA Ribulose bisphosphate carboxylase small c...   167   2e-40
tr|A9PI67|A9PI67_POPTR Ribulose bisphosphate carboxylase small c...   167   4e-40
tr|A7LIT5|A7LIT5_9ROSI Ribulose bisphosphate carboxylase small c...   167   4e-40
tr|Q6RWD8|Q6RWD8_CAPAN Ribulose bisphosphate carboxylase small c...   166   5e-40
tr|A9U4X8|A9U4X8_PHYPA Ribulose bisphosphate carboxylase small c...   166   5e-40
tr|A9U4X7|A9U4X7_PHYPA Ribulose bisphosphate carboxylase small c...   166   5e-40
tr|Q9ZWG3|Q9ZWG3_9POAL Ribulose bisphosphate carboxylase small c...   166   6e-40
tr|Q0WVH4|Q0WVH4_ARATH Ribulose bisphosphate carboxylase small c...   166   8e-40
tr|A9SCN2|A9SCN2_PHYPA Ribulose bisphosphate carboxylase small c...   166   8e-40
tr|Q9FEE4|Q9FEE4_WHEAT Ribulose bisphosphate carboxylase small c...   165   1e-39
tr|B6RHQ3|B6RHQ3_9POAL Chloroplast ribulose-1,5-bisphosphate car...   165   1e-39
tr|A9NZM2|A9NZM2_PICSI Ribulose bisphosphate carboxylase small c...   165   1e-39

>tr|Q43110|Q43110_PTEVI Ribulose bisphosphate carboxylase small
           chain OS=Pteris vittata GN=rbcS4 PE=3 SV=1
          Length = 174

 Score =  269 bits (688), Expect = 5e-71
 Identities = 124/143 (86%), Positives = 133/143 (93%)
 Frame = +3

Query: 81  CCAPAESLSKSFSGLKATTLFAPKSPNPLAISNGSRVSAMLVWKPYDNKKFETLSYLPPL 260
           C A AESLSKSFSGLKA TLFAPK  NPLAISNGSR+SAMLVWKPYDNKKFETLSYLPPL
Sbjct: 15  CAAAAESLSKSFSGLKANTLFAPKCANPLAISNGSRISAMLVWKPYDNKKFETLSYLPPL 74

Query: 261 SSEQIAKQVDFMVRKGWTPCIEFDKIGSVYREHFHGSSYYDGRYWVMWKLPMFGCQDAAA 440
           +++QIAKQV++MVRKGWTPCIEFD IGSVYREHFHGS YYDGRYW+MWKLPMFGC D+ +
Sbjct: 75  TNDQIAKQVEYMVRKGWTPCIEFDTIGSVYREHFHGSGYYDGRYWIMWKLPMFGCTDSGS 134

Query: 441 VLREIAECAKEYPEAFIRVLGFD 509
           VLREIAECAKEYP AFIRVLGFD
Sbjct: 135 VLREIAECAKEYPTAFIRVLGFD 157


>tr|A9T3W5|A9T3W5_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_87740 PE=3 SV=1
          Length = 179

 Score =  181 bits (460), Expect = 1e-44
 Identities = 87/145 (60%), Positives = 105/145 (72%), Gaps = 3/145 (2%)
 Frame = +3

Query: 84  CAPAESLSKSFSGLKATTLFAPKSPNPLAISNGSRVSAMLVWKPYDNKKFETLSYLPPLS 263
           C  + S+ K FSGLK+TTLFA K+    ++ NGSRV  M VW P    KFET SYLPPL+
Sbjct: 20  CRESSSV-KQFSGLKSTTLFASKARRLSSVHNGSRVQCMQVWNPIGQPKFETFSYLPPLT 78

Query: 264 SEQIAKQVDFMVRKGWTPCIEFDKIGSVYREHFHG---SSYYDGRYWVMWKLPMFGCQDA 434
            +QIAKQVDFM+++   PCIEFD +GSV R +F G   S YYDGRYW MWKLPMFGC D+
Sbjct: 79  DDQIAKQVDFMIQQNLIPCIEFDTVGSVSRTNFSGPGSSGYYDGRYWTMWKLPMFGCTDS 138

Query: 435 AAVLREIAECAKEYPEAFIRVLGFD 509
           A VLREI EC + +P  ++RVLGFD
Sbjct: 139 AQVLREIQECKQSFPSCWVRVLGFD 163


>tr|Q9SXH1|Q9SXH1_PHYPA Ribulose bisphosphate carboxylase small
           chain (Fragment) OS=Physcomitrella patens PE=2 SV=1
          Length = 214

 Score =  181 bits (459), Expect = 2e-44
 Identities = 86/145 (59%), Positives = 107/145 (73%), Gaps = 4/145 (2%)
 Frame = +3

Query: 87  APAESLS-KSFSGLKATTLFAPKSPNPLAISNGSRVSAMLVWKPYDNKKFETLSYLPPLS 263
           AP+ES S K+FSGLK+ TLF+ K+    ++ NGSRV  M VW P    KFET SYLPPL+
Sbjct: 54  APSESSSVKAFSGLKSATLFSGKTQKLSSVQNGSRVQCMQVWNPIGQPKFETFSYLPPLT 113

Query: 264 SEQIAKQVDFMVRKGWTPCIEFDKIGSVYREHFHG---SSYYDGRYWVMWKLPMFGCQDA 434
            +QIAKQVD+M+++   PCIEFD +GSV R +F G   S YYDGRYW MWKLPMFGC D+
Sbjct: 114 DDQIAKQVDYMIQQNLIPCIEFDTVGSVSRTNFSGAGSSGYYDGRYWTMWKLPMFGCTDS 173

Query: 435 AAVLREIAECAKEYPEAFIRVLGFD 509
           + VLREI EC  ++P  ++RVLGFD
Sbjct: 174 SQVLREIQECKSQFPSCWVRVLGFD 198


>tr|A9T3X7|A9T3X7_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_87752 PE=3 SV=1
          Length = 179

 Score =  178 bits (452), Expect = 1e-43
 Identities = 86/145 (59%), Positives = 104/145 (71%), Gaps = 3/145 (2%)
 Frame = +3

Query: 84  CAPAESLSKSFSGLKATTLFAPKSPNPLAISNGSRVSAMLVWKPYDNKKFETLSYLPPLS 263
           C  + S+ K FSGLK+TTL A K+    ++ NGSRV  M VW P    KFET SYLPPL+
Sbjct: 20  CRESSSV-KQFSGLKSTTLSASKARRLSSVHNGSRVQCMQVWNPIGQPKFETFSYLPPLT 78

Query: 264 SEQIAKQVDFMVRKGWTPCIEFDKIGSVYREHFHG---SSYYDGRYWVMWKLPMFGCQDA 434
            +QIAKQVDFM+++   PCIEFD +GSV R +F G   S YYDGRYW MWKLPMFGC D+
Sbjct: 79  DDQIAKQVDFMIQQNLIPCIEFDTVGSVSRTNFSGPGSSGYYDGRYWTMWKLPMFGCTDS 138

Query: 435 AAVLREIAECAKEYPEAFIRVLGFD 509
           A VLREI EC + +P  ++RVLGFD
Sbjct: 139 AQVLREIQECKQSFPSCWVRVLGFD 163


>tr|Q75WT7|Q75WT7_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens GN=PprbcS1
           PE=2 SV=1
          Length = 184

 Score =  177 bits (450), Expect = 2e-43
 Identities = 86/145 (59%), Positives = 103/145 (71%), Gaps = 4/145 (2%)
 Frame = +3

Query: 87  APAESLS-KSFSGLKATTLFAPKSPNPLAISNGSRVSAMLVWKPYDNKKFETLSYLPPLS 263
           A  ES S K+FSGLK+ TLF  KS    ++ NGSRV  M VW P    KFET SYLPPLS
Sbjct: 24  ASRESSSVKAFSGLKSATLFTSKSQQLSSVQNGSRVQCMQVWNPIGQPKFETFSYLPPLS 83

Query: 264 SEQIAKQVDFMVRKGWTPCIEFDKIGSVYREHFHG---SSYYDGRYWVMWKLPMFGCQDA 434
            +QIA+QVD+M+++   PCIEFD +G+V R +F G   S YYDGRYW MWKLPMFGC D+
Sbjct: 84  DDQIARQVDYMIQQNLIPCIEFDTVGAVSRTNFSGSGSSGYYDGRYWTMWKLPMFGCTDS 143

Query: 435 AAVLREIAECAKEYPEAFIRVLGFD 509
           + VLREI EC   YP  ++RVLGFD
Sbjct: 144 SQVLREIQECKTSYPSCWVRVLGFD 168


>tr|A9TCL7|A9TCL7_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_221004 PE=3 SV=1
          Length = 184

 Score =  177 bits (448), Expect = 3e-43
 Identities = 82/137 (59%), Positives = 100/137 (72%), Gaps = 3/137 (2%)
 Frame = +3

Query: 108 KSFSGLKATTLFAPKSPNPLAISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQV 287
           K+FSGLK  TLF+ K+    A+ NGSRV  M VW P    KFET SYLPPL+ +QIAKQV
Sbjct: 32  KAFSGLKPATLFSSKTQKLGAVQNGSRVQCMQVWNPIGQPKFETFSYLPPLTDDQIAKQV 91

Query: 288 DFMVRKGWTPCIEFDKIGSVYREHFHG---SSYYDGRYWVMWKLPMFGCQDAAAVLREIA 458
           D+M+++   PCIEFD +GSV R +F G   S YYDGRYW MWKLPMFGC D++ VLREI 
Sbjct: 92  DYMIQQNLIPCIEFDTVGSVSRTNFSGAGSSGYYDGRYWTMWKLPMFGCTDSSQVLREIQ 151

Query: 459 ECAKEYPEAFIRVLGFD 509
           EC  ++P  ++RVLGFD
Sbjct: 152 ECKSQFPSCWVRVLGFD 168


>tr|A9TT85|A9TT85_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_225236 PE=3 SV=1
          Length = 183

 Score =  174 bits (441), Expect = 2e-42
 Identities = 79/137 (57%), Positives = 101/137 (73%), Gaps = 3/137 (2%)
 Frame = +3

Query: 108 KSFSGLKATTLFAPKSPNPLAISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQV 287
           K+FSGLK+ TLF+ ++    ++ NGSRV  M VW P    KFET SYLPPL+ ++IAKQV
Sbjct: 31  KAFSGLKSATLFSSQAQTLSSVQNGSRVQCMQVWNPIGQPKFETFSYLPPLTDDEIAKQV 90

Query: 288 DFMVRKGWTPCIEFDKIGSVYREHFHG---SSYYDGRYWVMWKLPMFGCQDAAAVLREIA 458
           D+M+++   PCIEFD +GSV R +F G   S YYDGRYW MWKLPMFGC D++ VLREI 
Sbjct: 91  DYMIQQNLIPCIEFDTVGSVSRTNFSGAGSSGYYDGRYWTMWKLPMFGCTDSSQVLREIQ 150

Query: 459 ECAKEYPEAFIRVLGFD 509
           EC  ++P  ++RVLGFD
Sbjct: 151 ECKTQFPSCWVRVLGFD 167


>tr|Q9SEB9|Q9SEB9_LACSA Ribulose bisphosphate carboxylase small
           chain OS=Lactuca sativa PE=2 SV=1
          Length = 181

 Score =  173 bits (438), Expect = 5e-42
 Identities = 82/146 (56%), Positives = 104/146 (71%), Gaps = 6/146 (4%)
 Frame = +3

Query: 90  PAE-SLSKSFSGLKATTLF--APKSPNPLAI--SNGSRVSAMLVWKPYDNKKFETLSYLP 254
           PA+ SL+  F+GLK+   F    K+ N  +   SNG RV  M VW P   KK+ETLSYLP
Sbjct: 17  PAQASLAAPFTGLKSNVAFPVTKKANNDFSSLPSNGGRVQCMKVWPPIGLKKYETLSYLP 76

Query: 255 PLSSEQIAKQVDFMVRKGWTPCIEFD-KIGSVYREHFHGSSYYDGRYWVMWKLPMFGCQD 431
           PLS E ++K++D+++R  W PC+EF+ + G VYREH H   YYDGRYW MWKLPMFGC D
Sbjct: 77  PLSDEALSKEIDYLIRNKWVPCLEFELEHGFVYREHHHSPGYYDGRYWTMWKLPMFGCTD 136

Query: 432 AAAVLREIAECAKEYPEAFIRVLGFD 509
           +A V++E+ EC KEYP AFIRV+GFD
Sbjct: 137 SAQVMKEVGECKKEYPNAFIRVIGFD 162


>tr|A9RJ57|A9RJ57_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_115069 PE=3 SV=1
          Length = 181

 Score =  172 bits (437), Expect = 6e-42
 Identities = 82/146 (56%), Positives = 101/146 (69%), Gaps = 5/146 (3%)
 Frame = +3

Query: 87  APAESLS-----KSFSGLKATTLFAPKSPNPLAISNGSRVSAMLVWKPYDNKKFETLSYL 251
           +PA S S     K+FSGLK+ T+F+ K+ N  ++ NGSRV  M VW P    KFET SYL
Sbjct: 20  SPAASTSGSTTVKAFSGLKSATVFSGKAQNSSSVQNGSRVQCMQVWNPIGMTKFETFSYL 79

Query: 252 PPLSSEQIAKQVDFMVRKGWTPCIEFDKIGSVYREHFHGSSYYDGRYWVMWKLPMFGCQD 431
           PPLS + IAKQV++M+++   PC+EFD    V R +     YYDGRYW MWKLPMFGCQD
Sbjct: 80  PPLSDDAIAKQVEYMIQQKLIPCLEFDNANGVSRTNNSSPGYYDGRYWTMWKLPMFGCQD 139

Query: 432 AAAVLREIAECAKEYPEAFIRVLGFD 509
           +A VLREI EC K +P  F+RVLGFD
Sbjct: 140 SAQVLREIEECKKTFPGCFVRVLGFD 165


>tr|Q3LFQ4|Q3LFQ4_PANGI Ribulose bisphosphate carboxylase small
           chain OS=Panax ginseng PE=2 SV=1
          Length = 183

 Score =  172 bits (435), Expect = 1e-41
 Identities = 81/145 (55%), Positives = 104/145 (71%), Gaps = 5/145 (3%)
 Frame = +3

Query: 90  PAE-SLSKSFSGLKATTLF-APKSPNPLAI--SNGSRVSAMLVWKPYDNKKFETLSYLPP 257
           PA+ S+   F+GLK+T  F   +  N +    SNG RV  M VW P   KKFETLSYLP 
Sbjct: 19  PAQASMVAPFTGLKSTAAFPVTRKVNDITSLPSNGGRVQCMKVWPPLGLKKFETLSYLPQ 78

Query: 258 LSSEQIAKQVDFMVRKGWTPCIEFD-KIGSVYREHFHGSSYYDGRYWVMWKLPMFGCQDA 434
           L+ EQ++K+VD+++R GW PC+EF+ + G VYREH H   YYDGRYW MWKLPMFGC D+
Sbjct: 79  LTQEQLSKEVDYLLRSGWVPCLEFELEHGFVYREHHHSPGYYDGRYWTMWKLPMFGCTDS 138

Query: 435 AAVLREIAECAKEYPEAFIRVLGFD 509
           + VL+E+ EC KEYP A+IR++GFD
Sbjct: 139 SQVLKEVEECKKEYPNAYIRIIGFD 163