BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP920923|Adiantum capillus-veneris mRNA, clone:
YMU001_000143_D09.
         (555 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q4R5M2|CATB_MACFA Cathepsin B OS=Macaca fascicularis GN=CTSB ...    31   4.7  
sp|Q94KT8|COBRA_ARATH Protein COBRA OS=Arabidopsis thaliana GN=C...    30   7.9  

>sp|Q4R5M2|CATB_MACFA Cathepsin B OS=Macaca fascicularis GN=CTSB
           PE=2 SV=1
          Length = 339

 Score = 30.8 bits (68), Expect = 4.7
 Identities = 16/37 (43%), Positives = 22/37 (59%), Gaps = 7/37 (18%)
 Frame = +1

Query: 211 GLMCGSA------ASLWHYIGRKGYLSGALHNS-VGC 300
           G+MCG        A  W++  RKG +SG L++S VGC
Sbjct: 143 GIMCGDGCNGGYPAGAWNFWTRKGLVSGGLYDSHVGC 179


>sp|Q94KT8|COBRA_ARATH Protein COBRA OS=Arabidopsis thaliana GN=COB
           PE=2 SV=1
          Length = 456

 Score = 30.0 bits (66), Expect = 7.9
 Identities = 14/39 (35%), Positives = 23/39 (58%), Gaps = 3/39 (7%)
 Frame = -3

Query: 379 KCQSGACKNADIPHMASIVA*GRPQGGT---LLSCVVHL 272
           + +SGAC + D PH+AS+V+    +G     L+ C  H+
Sbjct: 259 RTESGACLDPDTPHLASVVSPPTKKGTVLPPLVQCTRHM 297

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP920923|Adiantum capillus-veneris mRNA, clone:
YMU001_000143_D09.
         (555 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B5EAU4|B5EAU4_GEOBB NAD-dependent epimerase/dehydratase OS=Ge...    33   7.8  

>tr|B5EAU4|B5EAU4_GEOBB NAD-dependent epimerase/dehydratase
           OS=Geobacter bemidjiensis (strain Bem / ATCC BAA-1014 /
           DSM 16622) GN=Gbem_0374 PE=3 SV=1
          Length = 310

 Score = 33.5 bits (75), Expect = 7.8
 Identities = 19/49 (38%), Positives = 28/49 (57%), Gaps = 2/49 (4%)
 Frame = +3

Query: 171 STFLTFSPIF*VIGADVWVGSQPMALYREEGVPLRCTTQ--LSRVPPCG 311
           ST  +  P+  V GA  ++G + +A   EEG+P+RC  +   S VP CG
Sbjct: 2   STSNSKKPMVLVTGATGFIGRRLVAALAEEGIPVRCLVRNVESPVPACG 50