BP920941
Clone id YMU001_000143_F05
Library
Length 513
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000143_F05.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
GAAGAGAGAAACAAGCGTGATGCAGCACTGGAAGCATCCTTGCGTGAGGTGCTTTTTCAG
ATTTTGCAGCTTGTGAATGACAAAAAGGATCATATACCACCTGTTTCGAACTCCAATATT
GTCTCATTTCCCTATGAGATAACAGTCCTAAGTCTTTCAGATTCATTGTTTCGAATGGAT
ATGTTCAAGCGAATGCTACATACAGGCCCACCGACGATGCCTAGTTAGCAGAGAGCCCTT
ATGCAGCAGCAGCTGGTTCTGTTTTATATTTAATGTGAAGCTCTCAACACCATTCTTCCT
TTTGGGCAGCCAACGTGCGGAGCCAGCCAGCCTATGGGAGCACCTCTCTTATGGCTTGAT
GGTCAAAATGGTCTTTGGTTGATGTACAGAGTTTACTTGTGAAGATTATTGTTTCCTTGG
AAAATCTCGGAACAACAGTGATTCACAAACAATGTATAATTAGTTACTACACAGATCGTC
CCATAGCTTTTGTAAGACGCCGGACGTGTATTT
■■Homology search results ■■ -
sp_hit_id O94364
Definition sp|O94364|YHOH_SCHPO Uncharacterized serine-rich protein C428.17c OS=Schizosaccharomyces pombe
Align length 41
Score (bit) 29.6
E-value 8.7
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP920941|Adiantum capillus-veneris mRNA, clone:
YMU001_000143_F05.
(513 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|O94364|YHOH_SCHPO Uncharacterized serine-rich protein C428.17... 30 8.7
sp|Q3ZAV8|EDC4_RAT Enhancer of mRNA-decapping protein 4 OS=Rattu... 30 8.7
sp|Q3UJB9|EDC4_MOUSE Enhancer of mRNA-decapping protein 4 OS=Mus... 30 8.7
sp|Q6P2E9|EDC4_HUMAN Enhancer of mRNA-decapping protein 4 OS=Hom... 30 8.7

>sp|O94364|YHOH_SCHPO Uncharacterized serine-rich protein C428.17c
OS=Schizosaccharomyces pombe GN=SPBC428.17c PE=2 SV=1
Length = 602

Score = 29.6 bits (65), Expect = 8.7
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = +1

Query: 19 DAALEASLREVLFQILQLVNDKKDHIPPVSNSNIVSFPYEI 141
D + A ++L ++Q VN DH VS S + F Y+I
Sbjct: 417 DTVVHACSEKLLRTLIQTVNSNSDHALAVSKSEVPLFAYKI 457


>sp|Q3ZAV8|EDC4_RAT Enhancer of mRNA-decapping protein 4 OS=Rattus
norvegicus GN=Edc4 PE=2 SV=1
Length = 1407

Score = 29.6 bits (65), Expect = 8.7
Identities = 15/36 (41%), Positives = 19/36 (52%)
Frame = +1

Query: 229 QRALMQQQLVLFYI*CEALNTILPFGQPTCGASQPM 336
Q+AL L L CE ++ FGQP C SQP+
Sbjct: 1288 QQALTAADLNLVLYVCETVDPAQVFGQPPCPLSQPV 1323


>sp|Q3UJB9|EDC4_MOUSE Enhancer of mRNA-decapping protein 4 OS=Mus
musculus GN=Edc4 PE=1 SV=2
Length = 1406

Score = 29.6 bits (65), Expect = 8.7
Identities = 15/36 (41%), Positives = 19/36 (52%)
Frame = +1

Query: 229 QRALMQQQLVLFYI*CEALNTILPFGQPTCGASQPM 336
Q+AL L L CE ++ FGQP C SQP+
Sbjct: 1287 QQALTAADLNLVLYVCETVDPAQVFGQPPCPLSQPV 1322


>sp|Q6P2E9|EDC4_HUMAN Enhancer of mRNA-decapping protein 4 OS=Homo
sapiens GN=EDC4 PE=1 SV=1
Length = 1401

Score = 29.6 bits (65), Expect = 8.7
Identities = 15/36 (41%), Positives = 19/36 (52%)
Frame = +1

Query: 229 QRALMQQQLVLFYI*CEALNTILPFGQPTCGASQPM 336
Q+AL L L CE ++ FGQP C SQP+
Sbjct: 1282 QQALTAADLNLVLYVCETVDPAQVFGQPPCPLSQPV 1317


tr_hit_id A7R7J8
Definition tr|A7R7J8|A7R7J8_VITVI Chromosome undetermined scaffold_1831, whole genome shotgun sequence OS=Vitis vinifera
Align length 75
Score (bit) 100.0
E-value 3.0e-20
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP920941|Adiantum capillus-veneris mRNA, clone:
YMU001_000143_F05.
(513 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A7R7J8|A7R7J8_VITVI Chromosome undetermined scaffold_1831, wh... 100 3e-20
tr|A9PIV4|A9PIV4_POPJC Putative uncharacterized protein OS=Popul... 94 5e-18
tr|A9THM9|A9THM9_PHYPA Predicted protein OS=Physcomitrella paten... 84 3e-15
tr|A7R916|A7R916_VITVI Chromosome undetermined scaffold_3188, wh... 70 6e-11
tr|Q9FKY8|Q9FKY8_ARATH Arabidopsis thaliana genomic DNA, chromos... 62 1e-08
tr|B6SMA0|B6SMA0_MAIZE Putative uncharacterized protein OS=Zea m... 60 8e-08
tr|B8BPG3|B8BPG3_ORYSI Putative uncharacterized protein OS=Oryza... 57 4e-07
tr|A4S7G0|A4S7G0_OSTLU Predicted protein OS=Ostreococcus lucimar... 52 1e-05
tr|Q2QSH8|Q2QSH8_ORYSJ Os12g0428400 protein OS=Oryza sativa subs... 52 2e-05
tr|A2ZJZ6|A2ZJZ6_ORYSI Putative uncharacterized protein OS=Oryza... 52 2e-05
tr|A8JCL2|A8JCL2_CHLRE Predicted protein OS=Chlamydomonas reinha... 49 1e-04
tr|B6T277|B6T277_MAIZE Putative uncharacterized protein OS=Zea m... 49 1e-04
tr|A6S177|A6S177_BOTFB Putative uncharacterized protein OS=Botry... 49 1e-04
tr|Q0INI1|Q0INI1_ORYSJ Os12g0446700 protein OS=Oryza sativa subs... 47 6e-04
tr|A1C9X1|A1C9X1_ASPCL DUF1649 domain protein OS=Aspergillus cla... 46 0.001
tr|Q2UTR4|Q2UTR4_ASPOR Predicted protein OS=Aspergillus oryzae G... 46 0.001
tr|B8NRH0|B8NRH0_ASPFL Putative uncharacterized protein OS=Asper... 46 0.001
tr|B8MBU5|B8MBU5_9EURO Putative uncharacterized protein OS=Talar... 46 0.001
tr|A7E5L9|A7E5L9_SCLS1 Putative uncharacterized protein OS=Scler... 46 0.001
tr|A6RFH1|A6RFH1_AJECN Putative uncharacterized protein OS=Ajell... 46 0.001
tr|A4R8N2|A4R8N2_MAGGR Putative uncharacterized protein OS=Magna... 45 0.002
tr|Q4WTW2|Q4WTW2_ASPFU Putative uncharacterized protein OS=Asper... 45 0.002
tr|Q1DUN0|Q1DUN0_COCIM Putative uncharacterized protein OS=Cocci... 45 0.002
tr|B2AWR9|B2AWR9_PODAN Predicted CDS Pa_7_8090 OS=Podospora anse... 45 0.002
tr|B0Y3D7|B0Y3D7_ASPFC Putative uncharacterized protein OS=Asper... 45 0.002
tr|A1CZE0|A1CZE0_NEOFI Putative uncharacterized protein OS=Neosa... 45 0.002
tr|Q0CA83|Q0CA83_ASPTN Putative uncharacterized protein OS=Asper... 45 0.003
tr|B6QG94|B6QG94_PENMA Putative uncharacterized protein OS=Penic... 44 0.005
tr|B6HHY3|B6HHY3_PENCH Pc21g01150 protein OS=Penicillium chrysog... 43 0.011
tr|Q5BB00|Q5BB00_EMENI Putative uncharacterized protein OS=Emeri... 42 0.018

>tr|A7R7J8|A7R7J8_VITVI Chromosome undetermined scaffold_1831, whole
genome shotgun sequence OS=Vitis vinifera
GN=GSVIVT00010055001 PE=4 SV=1
Length = 218

Score = 100 bits (250), Expect = 3e-20
Identities = 51/75 (68%), Positives = 61/75 (81%)
Frame = +1

Query: 1 EERNKRDAALEASLREVLFQILQLVNDKKDHIPPVSNSNIVSFPYEITVLSLSDSLFRMD 180
E+R+ R AALEASLREVLFQI++ VN+KKDHIP + ++ VSFPYEIT+ S SDS F MD
Sbjct: 144 EDRSLRRAALEASLREVLFQIIKFVNEKKDHIPSIPSAEGVSFPYEITIPSSSDSAFGMD 203

Query: 181 MFKRMLHTGPPTMPS 225
MFKRML +G PTM S
Sbjct: 204 MFKRMLQSGHPTMLS 218


>tr|A9PIV4|A9PIV4_POPJC Putative uncharacterized protein OS=Populus
jackii PE=2 SV=1
Length = 216

Score = 93.6 bits (231), Expect = 5e-18
Identities = 48/75 (64%), Positives = 58/75 (77%)
Frame = +1

Query: 1 EERNKRDAALEASLREVLFQILQLVNDKKDHIPPVSNSNIVSFPYEITVLSLSDSLFRMD 180
E+R R ALEASL EVLFQI++ VN+KKDH+PP+ N +I+ FP EIT+ S SDS F MD
Sbjct: 143 EDRGVRREALEASLHEVLFQIIKFVNEKKDHVPPI-NEDIICFPCEITIPSSSDSPFGMD 201

Query: 181 MFKRMLHTGPPTMPS 225
+FKRML TG PTM S
Sbjct: 202 VFKRMLQTGHPTMLS 216


>tr|A9THM9|A9THM9_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_145687 PE=4 SV=1
Length = 210

Score = 84.3 bits (207), Expect = 3e-15
Identities = 40/74 (54%), Positives = 59/74 (79%), Gaps = 1/74 (1%)
Frame = +1

Query: 1 EERNKRDAALEASLREVLFQILQLVNDKKDHIPPVSNSN-IVSFPYEITVLSLSDSLFRM 177
+ER +R+A LEA+LR+V+ ++L +VN+KKDHIPPV + +VSFP+EI++ S SDS M
Sbjct: 137 DERQRRNATLEAALRDVIIEVLSIVNEKKDHIPPVQQPDVVVSFPFEISIPSSSDS--TM 194

Query: 178 DMFKRMLHTGPPTM 219
D+ KR++ +GPPTM
Sbjct: 195 DIIKRIIQSGPPTM 208


>tr|A7R916|A7R916_VITVI Chromosome undetermined scaffold_3188, whole
genome shotgun sequence (Fragment) OS=Vitis vinifera
GN=GSVIVT00012670001 PE=4 SV=1
Length = 142

Score = 70.1 bits (170), Expect = 6e-11
Identities = 33/49 (67%), Positives = 42/49 (85%)
Frame = +1

Query: 1 EERNKRDAALEASLREVLFQILQLVNDKKDHIPPVSNSNIVSFPYEITV 147
E+R+ R AALEASLREVLFQI++ VN+KKDHIP + ++ VSFPYEIT+
Sbjct: 92 EDRSLRRAALEASLREVLFQIIKFVNEKKDHIPSIPSAEGVSFPYEITI 140


>tr|Q9FKY8|Q9FKY8_ARATH Arabidopsis thaliana genomic DNA, chromosome
5, P1 clone:MUD21 OS=Arabidopsis thaliana PE=4 SV=1
Length = 255

Score = 62.4 bits (150), Expect = 1e-08
Identities = 27/49 (55%), Positives = 39/49 (79%)
Frame = +1

Query: 1 EERNKRDAALEASLREVLFQILQLVNDKKDHIPPVSNSNIVSFPYEITV 147
EER+ R LE SL+EVLFQI++ VN+KKDH+PP+ N ++ +P+EIT+
Sbjct: 193 EERSSRRTLLEQSLQEVLFQIIKFVNEKKDHVPPI-NDGVIYYPFEITI 240


>tr|B6SMA0|B6SMA0_MAIZE Putative uncharacterized protein OS=Zea mays
PE=2 SV=1
Length = 213

Score = 59.7 bits (143), Expect = 8e-08
Identities = 35/73 (47%), Positives = 50/73 (68%), Gaps = 2/73 (2%)
Frame = +1

Query: 1 EERNKRDAALEASLREVLFQILQLVNDKKDHIPPVSNSNIVSFPYEITVLSLSDSLF--R 174
EE + R AALEAS+ EVLFQI++ N+KKDHIP + + F +EI + S SDS+F
Sbjct: 142 EETSTRRAALEASINEVLFQIIKFANEKKDHIPAIPDR---IFNHEIMIPS-SDSVFGWN 197

Query: 175 MDMFKRMLHTGPP 213
D+ +R+L++G P
Sbjct: 198 TDVIRRVLNSGHP 210


>tr|B8BPG3|B8BPG3_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_38206 PE=4 SV=1
Length = 208

Score = 57.4 bits (137), Expect = 4e-07
Identities = 31/70 (44%), Positives = 48/70 (68%), Gaps = 2/70 (2%)
Frame = +1

Query: 1 EERNKRDAALEASLREVLFQILQLVNDKKDHIPPVSNSNIVSFPYEITVLSLSDSLF--R 174
EE + + AAL ++EVLFQI+ N+KKDHIPP+S+ F +EI++ S SDS+F
Sbjct: 142 EEASSKRAALGLLIQEVLFQIINFANEKKDHIPPISDR---IFNHEISIPSSSDSVFGWN 198

Query: 175 MDMFKRMLHT 204
D+ +R+L++
Sbjct: 199 ADVLRRVLNS 208


>tr|A4S7G0|A4S7G0_OSTLU Predicted protein OS=Ostreococcus
lucimarinus (strain CCE9901) GN=OSTLU_89136 PE=4 SV=1
Length = 221

Score = 52.4 bits (124), Expect = 1e-05
Identities = 33/77 (42%), Positives = 46/77 (59%), Gaps = 5/77 (6%)
Frame = +1

Query: 4 ERNKRDAALEASLREVLFQILQLVNDKKDHIPPVSNSNIVSFPYEITV-LSLSDS--LFR 174
ER + AL + +L LVN+ K H+PPV+ S++VSFP+EI+V L+ DS F
Sbjct: 144 ERARAREALRDQVVGTQRHVLGLVNEMKAHVPPVTTSDVVSFPFEISVPLARDDSPGSFG 203

Query: 175 MDMFKRMLHTG--PPTM 219
DM KR+ G PP+M
Sbjct: 204 RDMLKRLASLGATPPSM 220


>tr|Q2QSH8|Q2QSH8_ORYSJ Os12g0428400 protein OS=Oryza sativa subsp.
japonica GN=Os12g0428400 PE=4 SV=1
Length = 105

Score = 52.0 bits (123), Expect = 2e-05
Identities = 26/51 (50%), Positives = 36/51 (70%)
Frame = +1

Query: 1 EERNKRDAALEASLREVLFQILQLVNDKKDHIPPVSNSNIVSFPYEITVLS 153
EE + R AALE+S+ EVLFQI+ N+KKDHIPP+ + F +EI++ S
Sbjct: 56 EESSSRRAALESSIHEVLFQIINFANEKKDHIPPIPDR---IFNHEISIPS 103


>tr|A2ZJZ6|A2ZJZ6_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_38148 PE=4 SV=1
Length = 348

Score = 52.0 bits (123), Expect = 2e-05
Identities = 26/51 (50%), Positives = 36/51 (70%)
Frame = +1

Query: 1 EERNKRDAALEASLREVLFQILQLVNDKKDHIPPVSNSNIVSFPYEITVLS 153
EE + R AALE+S+ EVLFQI+ N+KKDHIPP+ + F +EI++ S
Sbjct: 299 EESSSRRAALESSIHEVLFQIINFANEKKDHIPPIPDR---IFNHEISIPS 346