BP920945 |
Clone id |
YMU001_000143_F09 |
Library |
YMU01 |
Length |
555 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000143_F09. |
Accession |
BP920945 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL2136Contig1 |
Sequence |
CGGCATGACCAAAGTGTATTAGTCAAAGGAGATTTTTTATGCTTTGATGGCTGATAAGTT TTTAATGGAAATTAATAACATTGATGGGATTAAAGAGTCCAAGATGAGGATGGTGTTATG TTTAATGATGAGCTTCTTCCAATGTCGTACACGGAGCTATTACACACAGGACAATCAAAA AGAGTCCTAGCAAACAAAGATCTTGATACATCCGTTGTGACTTCTTCATCAAAAGTTCTA GATGAGCCATGTTTTCAACGTAAGAGTGGCAGAAAGAGAAAGATGAATGAGAAAATGAAA ACACTTAGTGAGCTTGACAGCGCTCGCAAAAGAGAGAGCAATGTTAACGAAAAGATTGTG AGTACAAGTTCAAAGAAAAATATTGATTATGATGATTCTGCAAAGGTTGCAAAGATGGAT TCATACACATTATAGGATATGGAGACTATCTTATTAGTGTACACTAAGAAGAGAACAGTC AATGAGATGTATTTTTCGCTTCGAAAGGCGTATCTGAATTTGAAGAAAGAGGAGATTACT TTCAAGGCTTATACT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P36100 |
Definition |
sp|P36100|T2EA_YEAST Transcription initiation factor IIE subunit alpha OS=Saccharomyces cerevisiae |
Align length |
142 |
Score (bit) |
37.7 |
E-value |
0.038 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
B0P0W3 |
Definition |
tr|B0P0W3|B0P0W3_9CLOT Putative uncharacterized protein OS=Clostridium sp. SS2/1 |
Align length |
122 |
Score (bit) |
38.9 |
E-value |
0.19 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP920945|Adiantum capillus-veneris mRNA, clone: YMU001_000143_F09. (555 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|B0P0W3|B0P0W3_9CLOT Putative uncharacterized protein OS=Clost... 39 0.19 tr|Q2U5A1|Q2U5A1_ASPOR DNA repair protein RAD18 OS=Aspergillus o... 39 0.25 tr|Q7RE36|Q7RE36_PLAYO Putative uncharacterized protein PY05232 ... 38 0.42 tr|A6ZZT5|A6ZZT5_YEAS7 Transcription factor tfIIE large subunit ... 38 0.42 tr|Q54CM8|Q54CM8_DICDI Putative uncharacterized protein OS=Dicty... 37 0.55 tr|Q29JH9|Q29JH9_DROPS GA15565 OS=Drosophila pseudoobscura pseud... 36 1.2 tr|B4QAF3|B4QAF3_DROSI GD21727 OS=Drosophila simulans GN=GD21727... 36 1.2 tr|B4H317|B4H317_DROPE GL13363 OS=Drosophila persimilis GN=GL133... 36 1.2 tr|Q7REJ8|Q7REJ8_PLAYO O1, putative OS=Plasmodium yoelii yoelii ... 36 1.6 tr|A2ETV1|A2ETV1_TRIVA Putative uncharacterized protein OS=Trich... 36 1.6 tr|B5VMC5|B5VMC5_YEAS6 YKL028Wp-like protein OS=Saccharomyces ce... 36 1.6 tr|B3LR55|B3LR55_YEAS1 Transcription initiation factor IIE alpha... 36 1.6 tr|Q7R8P8|Q7R8P8_PLAYO Putative uncharacterized protein PY07173 ... 35 2.1 tr|Q1PQB4|Q1PQB4_DROMI CG2995 (Fragment) OS=Drosophila miranda G... 35 2.1 tr|A7TS52|A7TS52_VANPO Putative uncharacterized protein OS=Vande... 35 2.1 tr|Q4UHS6|Q4UHS6_THEAN Putative uncharacterized protein OS=Theil... 35 2.7 tr|A0D157|A0D157_PARTE Chromosome undetermined scaffold_34, whol... 35 2.7 tr|Q30PI5|Q30PI5_SULDN Ferredoxin OS=Sulfurimonas denitrificans ... 35 3.6 tr|Q8IJI0|Q8IJI0_PLAF7 Pre-mRNA splicing factor, putative OS=Pla... 35 3.6 tr|B1RQ84|B1RQ84_CLOPE Chromosome segregation protein SMC OS=Clo... 34 4.6 tr|A6Y242|A6Y242_VIBCH Helicase conserved C-terminal domain prot... 34 4.6 tr|Q22YX0|Q22YX0_TETTH Putative uncharacterized protein OS=Tetra... 34 4.6 tr|Q8XJP0|Q8XJP0_CLOPE Chromosome partition protein OS=Clostridi... 34 6.1 tr|Q0TPN7|Q0TPN7_CLOP1 Chromosome segregation protein SMC OS=Clo... 34 6.1 tr|B1V465|B1V465_CLOPE Chromosome segregation protein SMC OS=Clo... 34 6.1 tr|B1R8I0|B1R8I0_CLOPE Chromosome segregation protein SMC OS=Clo... 34 6.1 tr|Q7RF86|Q7RF86_PLAYO GYF domain, putative OS=Plasmodium yoelii... 34 6.1 tr|Q4X3C4|Q4X3C4_PLACH Putative uncharacterized protein (Fragmen... 34 6.1 tr|A2DUI3|A2DUI3_TRIVA Viral A-type inclusion protein, putative ... 34 6.1 tr|Q6C5K8|Q6C5K8_YARLI YALI0E17193p OS=Yarrowia lipolytica GN=YA... 34 6.1
>tr|B0P0W3|B0P0W3_9CLOT Putative uncharacterized protein OS=Clostridium sp. SS2/1 GN=CLOSS21_01452 PE=4 SV=1 Length = 404
Score = 38.9 bits (89), Expect = 0.19 Identities = 36/122 (29%), Positives = 58/122 (47%), Gaps = 11/122 (9%) Frame = +1
Query: 208 TSVVTSSSKVLDEPC-FQRKSGRKRKMNEKMKTLSELDSARKRESN----VNEKIVSTSS 372 T V T ++ + E QRK +K+K K T ++ ++K+E N + +++S SS Sbjct: 43 TEVSTETAATVQETKRTQRKEQQKKKTTSKKHTKTKKIKSKKKEENKVIPMPTQVISKSS 102
Query: 373 KKNID---YDDSAKVAKMDSYTL*DMETILLVYTKKRTVNEM---YFSLRKAYLNLKKEE 534 I+ D AKV ++ E I L K R++NE Y + KA + L +E Sbjct: 103 SDTIEGRIKDKQAKVKRLKKQKAKIEEEIRLEQQKARSINEFYKKYTANSKAEIALYGQE 162
Query: 535 IT 540 IT Sbjct: 163 IT 164
>tr|Q2U5A1|Q2U5A1_ASPOR DNA repair protein RAD18 OS=Aspergillus oryzae GN=AO090020000014 PE=4 SV=1 Length = 1169
Score = 38.5 bits (88), Expect = 0.25 Identities = 20/77 (25%), Positives = 39/77 (50%) Frame = +1
Query: 178 KRVLANKDLDTSVVTSSSKVLDEPCFQRKSGRKRKMNEKMKTLSELDSARKRESNVNEKI 357 K+ LA+KD D + T + + + R++ +N+K + LD R+ + +NEK Sbjct: 863 KQQLASKDADIAASTEELHITQSEVLRAQDKRRKIINDKNIAVERLDDIRREKERINEKR 922
Query: 358 VSTSSKKNIDYDDSAKV 408 S++ ID+ + A + Sbjct: 923 EEVSARV-IDFSEKASL 938
>tr|Q7RE36|Q7RE36_PLAYO Putative uncharacterized protein PY05232 OS=Plasmodium yoelii yoelii GN=PY05232 PE=4 SV=1 Length = 490
Score = 37.7 bits (86), Expect = 0.42 Identities = 32/131 (24%), Positives = 59/131 (45%), Gaps = 5/131 (3%) Frame = +1
Query: 160 LHTGQSKRVLAN---KDLDTSVVTSSSKVLDEPCFQRKSGRKRKMNEKM-KTLSELDSAR 327 LH G++ N K++ T+ +T++ + D + + G K + NEKM K LS ++ + Sbjct: 74 LHNGENLSETNNEIQKNITTAFMTNNKNIND--AYNAEGGMKNQQNEKMKKKLSFIERKK 131
Query: 328 KRESN-VNEKIVSTSSKKNIDYDDSAKVAKMDSYTL*DMETILLVYTKKRTVNEMYFSLR 504 K ES+ VN S + D D D E +++ KK+ + + + + Sbjct: 132 KEESDRVNRLNTSFNIYSESDSDS-------------DSENYIMIKKKKKNIKKKFAGVN 178
Query: 505 KAYLNLKKEEI 537 + KKE + Sbjct: 179 NDNIYEKKENV 189
>tr|A6ZZT5|A6ZZT5_YEAS7 Transcription factor tfIIE large subunit OS=Saccharomyces cerevisiae (strain YJM789) GN=TFA1 PE=4 SV=1 Length = 481
Score = 37.7 bits (86), Expect = 0.42 Identities = 35/142 (24%), Positives = 64/142 (45%), Gaps = 9/142 (6%) Frame = +1
Query: 136 LPMSYTELLHTGQSKRVLANKD--LDTSVVTSSSKVLDEPCFQRKSGRKRKMN-----EK 294 LP L S+R AN L ++ T+S +V +R++ KRK N K Sbjct: 236 LPNLMGTALGNDSSRRAGANSQATLHINITTASDEVAQRELQERQAEEKRKQNAVPEWHK 295
Query: 295 MKTLSELDSARKRESNVNEKIVSTSSKKNIDYDD--SAKVAKMDSYTL*DMETILLVYTK 468 T+ + R + +V+ S+ +I+ D+ + + + ++ TL + E + Sbjct: 296 QSTIGKTALGRLDNEEEFDPVVTASAMDSINPDNEPAQETSYQNNRTLTEQE--MEEREN 353
Query: 469 KRTVNEMYFSLRKAYLNLKKEE 534 ++T+N+ Y +L K L KEE Sbjct: 354 EKTLNDYYAALAKKQAKLNKEE 375
>tr|Q54CM8|Q54CM8_DICDI Putative uncharacterized protein OS=Dictyostelium discoideum GN=DDB_0191648 PE=4 SV=1 Length = 706
Score = 37.4 bits (85), Expect = 0.55 Identities = 28/104 (26%), Positives = 51/104 (49%), Gaps = 2/104 (1%) Frame = +1
Query: 175 SKRVLANKDLDTSVVTSSSKVLDEPCF--QRKSGRKRKMNEKMKTLSELDSARKRESNVN 348 S + LANK + + S K + +KS +K+K N +T SEL+ ++ E Sbjct: 104 SPKSLANKQNNNNKKNQSKKPSPKTTNVNNKKSTQKKKKNSDEETSSELEEEQEEEEEKE 163
Query: 349 EKIVSTSSKKNIDYDDSAKVAKMDSYTL*DMETILLVYTKKRTV 480 E+ S ++ DY+ ++ ++++ + D E TKK+TV Sbjct: 164 EQSESEEEQEQEDYESNSSSSEVEDNSDLDYEP-----TKKKTV 202
>tr|Q29JH9|Q29JH9_DROPS GA15565 OS=Drosophila pseudoobscura pseudoobscura GN=GA15565 PE=4 SV=2 Length = 1811
Score = 36.2 bits (82), Expect = 1.2 Identities = 14/48 (29%), Positives = 31/48 (64%) Frame = +1
Query: 169 GQSKRVLANKDLDTSVVTSSSKVLDEPCFQRKSGRKRKMNEKMKTLSE 312 G++K++ + + D + + + ++DEP +RK GRKR++ E+ + S+ Sbjct: 492 GRAKKIKLDAESDAAPSSETPPLIDEPVIERKPGRKRRLPEEQQDQSQ 539
>tr|B4QAF3|B4QAF3_DROSI GD21727 OS=Drosophila simulans GN=GD21727 PE=4 SV=1 Length = 224
Score = 36.2 bits (82), Expect = 1.2 Identities = 27/107 (25%), Positives = 48/107 (44%), Gaps = 9/107 (8%) Frame = +1
Query: 193 NKDLDTSVVTSSSKVLDEPCFQRKSGRKRKMNEKMKTLSELDSARKRESNVNEKIVSTSS 372 N+D + + K +E F+R+SG +KM +K + +S AR ++ Sbjct: 60 NRDAEPKAAVAKEK--EESTFKRRSGHFKKMEQKARDISNWSRARSAYQKETAELEKWGQ 117
Query: 373 KKNIDYDD-----SAKVAKMDSYTL-*DMETILLV---YTKKRTVNE 486 KNI D+ +++ D Y L D++T++ + KK V E Sbjct: 118 AKNITDDELKAFFDGEISTKDKYRLFGDIQTVVQILKEVKKKGAVTE 164
>tr|B4H317|B4H317_DROPE GL13363 OS=Drosophila persimilis GN=GL13363 PE=4 SV=1 Length = 1818
Score = 36.2 bits (82), Expect = 1.2 Identities = 14/48 (29%), Positives = 31/48 (64%) Frame = +1
Query: 169 GQSKRVLANKDLDTSVVTSSSKVLDEPCFQRKSGRKRKMNEKMKTLSE 312 G++K++ + + D + + + ++DEP +RK GRKR++ E+ + S+ Sbjct: 499 GRAKKIKLDAESDAAPSSETPPLIDEPVIERKPGRKRRLPEEQQDQSQ 546
>tr|Q7REJ8|Q7REJ8_PLAYO O1, putative OS=Plasmodium yoelii yoelii GN=PY05066 PE=4 SV=1 Length = 822
Score = 35.8 bits (81), Expect = 1.6 Identities = 34/145 (23%), Positives = 64/145 (44%), Gaps = 8/145 (5%) Frame = +1
Query: 124 NDELLPMSYTELLHTGQSKRVLANKDLDTSVV--TSSSKVLDEPCFQRKSGRKRKMNEKM 297 + L P ++ +L SK N + + V T SS+ +++P + + +K+ ++K Sbjct: 409 SQSLSPTTWENILENSASKDSDQNDKKNKNKVKHTVSSESIEQPIDKNEKKQKKSKDDKK 468
Query: 298 KTLSELD--SARKRESNVNEKIVST----SSKKNIDYDDSAKVAKMDSYTL*DMETILLV 459 K + S+ S ++ +S+ SSKK + K K+ T D E + Sbjct: 469 KEKKKKKKYSSETEHSKLDHSELSSYSEYSSKKKDKKEKKKKKKKIPELTYSDYEKMDKK 528
Query: 460 YTKKRTVNEMYFSLRKAYLNLKKEE 534 Y K++V E S+ + Y KK + Sbjct: 529 YKSKKSVEEYSSSIDEEYKKEKKPD 553
>tr|A2ETV1|A2ETV1_TRIVA Putative uncharacterized protein OS=Trichomonas vaginalis G3 GN=TVAG_192050 PE=4 SV=1 Length = 4031
Score = 35.8 bits (81), Expect = 1.6 Identities = 29/113 (25%), Positives = 57/113 (50%), Gaps = 3/113 (2%) Frame = +1
Query: 220 TSSSKVLDEPCFQRKSGRKRKMNEKMKTLSELDSARK---RESNVNEKIVSTSSKKNIDY 390 + SK RKS K + K KT ++L S+ K R+S+V+ K S+ SKK+ D Sbjct: 824 SKKSKTESSSKSSRKSSIDSKSSTKRKTSTDLSSSSKSSSRKSSVDSK-SSSKSKKSTDT 882
Query: 391 DDSAKVAKMDSYTL*DMETILLVYTKKRTVNEMYFSLRKAYLNLKKEEITFKA 549 ++ ++K + +L+ ++++ NE+ S R++ ++ K + K+ Sbjct: 883 SSTSDISKKSN---------ILLSSRRKPSNELSSSSRRSSIDSKSSVTSRKS 926
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