BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP920949|Adiantum capillus-veneris mRNA, clone:
YMU001_000143_G01.
         (468 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q47B66|PANB_DECAR 3-methyl-2-oxobutanoate hydroxymethyltransf...    32   1.8  
sp|Q09804|URB2_SCHPO Probable nucleolar pre-ribosomal-associated...    31   3.1  
sp|Q69Z98|BRSK2_MOUSE BR serine/threonine-protein kinase 2 OS=Mu...    30   5.2  
sp|O31627|YJCE_BACSU Uncharacterized protein yjcE OS=Bacillus su...    30   5.3  
sp|P25563|YCC3_YEAST Putative uncharacterized protein YCL023C OS...    30   5.3  

>sp|Q47B66|PANB_DECAR 3-methyl-2-oxobutanoate
           hydroxymethyltransferase OS=Dechloromonas aromatica
           (strain RCB) GN=panB PE=3 SV=1
          Length = 272

 Score = 31.6 bits (70), Expect = 1.8
 Identities = 14/37 (37%), Positives = 20/37 (54%)
 Frame = -2

Query: 299 DIYETPPKSKATFRRRFREGALSLGSMRAEKLSRVKD 189
           D ++ PP  KA F + F EGA S+       ++ VKD
Sbjct: 224 DAFDIPPGKKAKFVKNFMEGASSIHDAACRAIAAVKD 260


>sp|Q09804|URB2_SCHPO Probable nucleolar pre-ribosomal-associated
            protein 2 OS=Schizosaccharomyces pombe GN=urb2 PE=2 SV=2
          Length = 1318

 Score = 30.8 bits (68), Expect = 3.1
 Identities = 17/52 (32%), Positives = 31/52 (59%), Gaps = 4/52 (7%)
 Frame = +1

Query: 79   HIIFVSLRICIHLFFNVTLK---RLSAALNITYTFSCIRSS-LTLDSFSALI 222
            H++ + L  C H+F+N TLK    + +AL++   F    S  ++LDSF+ ++
Sbjct: 1067 HLVHMVLLCCTHVFYNQTLKPATLIDSALDVFLCFVQKTSKFISLDSFNTIL 1118


>sp|Q69Z98|BRSK2_MOUSE BR serine/threonine-protein kinase 2 OS=Mus
           musculus GN=Brsk2 PE=1 SV=2
          Length = 735

 Score = 30.0 bits (66), Expect = 5.2
 Identities = 24/87 (27%), Positives = 42/87 (48%), Gaps = 1/87 (1%)
 Frame = -2

Query: 434 SPGIGGVLTRTSTTGSGNASV*GNKFYRAMLIVGKMDQSANLGDDDIYETPPKS-KATFR 258
           SP +GGV  RT      N+ +   +F+R  L V   ++ +NL  +   E   KS    F 
Sbjct: 468 SPSVGGVPWRTRLNSIKNSFLGSPRFHRRKLQVPTPEEMSNLTPESSPELAKKSWFGNFI 527

Query: 257 RRFREGALSLGSMRAEKLSRVKDDLMH 177
              +E  + +  ++ + LS +K D++H
Sbjct: 528 NLEKEEQIFV-VIKDKPLSSIKADIVH 553


>sp|O31627|YJCE_BACSU Uncharacterized protein yjcE OS=Bacillus
           subtilis GN=yjcE PE=4 SV=1
          Length = 100

 Score = 30.0 bits (66), Expect = 5.3
 Identities = 26/96 (27%), Positives = 43/96 (44%), Gaps = 1/96 (1%)
 Frame = +1

Query: 85  IFVSLRICIHLFFNVTLKRLSAALNITY-TFSCIRSSLTLDSFSALIEPSDSAPSRNLRL 261
           +++S+ IC H FF+ +L + +   ++ Y +FSC    L L  F       D A      +
Sbjct: 5   LYISINICPHSFFSQSLIKRALTFHLVYFSFSCRLILLLLFQFFVYPLKRDIADFFGSGI 64

Query: 262 NVAFDLGGVS*ISSSPRLADWSIFPTISMAL*NLFP 369
            +      +S +S    L    I+ TI   L +LFP
Sbjct: 65  ILLMSNRSISILSVLLVLNLTCIYHTIPTPLLSLFP 100


>sp|P25563|YCC3_YEAST Putative uncharacterized protein YCL023C
           OS=Saccharomyces cerevisiae GN=YCL023C PE=5 SV=1
          Length = 115

 Score = 30.0 bits (66), Expect = 5.3
 Identities = 17/54 (31%), Positives = 26/54 (48%), Gaps = 5/54 (9%)
 Frame = +1

Query: 67  HLYIHIIFVSLRICIHLF-----FNVTLKRLSAALNITYTFSCIRSSLTLDSFS 213
           H+Y  + +  LR CI ++     F+V  KR +  L + Y FSC       + FS
Sbjct: 62  HVYCTLYYAILRCCIQIYIFFFSFHVVFKR-ALLLRLRYAFSCTAREKKNEMFS 114

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP920949|Adiantum capillus-veneris mRNA, clone:
YMU001_000143_G01.
         (468 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A4J529|A4J529_DESRM Hydrogenases, Fe-only OS=Desulfotomaculum...    34   3.2  
tr|B4PXX6|B4PXX6_DROYA GE15387 OS=Drosophila yakuba GN=GE15387 P...    33   5.5  

>tr|A4J529|A4J529_DESRM Hydrogenases, Fe-only OS=Desulfotomaculum
           reducens (strain MI-1) GN=Dred_1654 PE=4 SV=1
          Length = 659

 Score = 34.3 bits (77), Expect = 3.2
 Identities = 19/49 (38%), Positives = 25/49 (51%)
 Frame = -1

Query: 165 GDV*GGAEPFEGDIEKEMYANAETYKNDVYVEMRKELDKEMLSKRDEMY 19
           G V GG +PF+ D E      +E Y  D  +E+ K  D E L+K  E Y
Sbjct: 500 GCVGGGGQPFQNDNEHRKARASEIYGIDAKLELHKAQDNEDLNKIFEKY 548


>tr|B4PXX6|B4PXX6_DROYA GE15387 OS=Drosophila yakuba GN=GE15387 PE=4
            SV=1
          Length = 1819

 Score = 33.5 bits (75), Expect = 5.5
 Identities = 24/64 (37%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
 Frame = -2

Query: 464  QGASLHLGRWSPGIGGVLTR--TSTTGSGNASV*GNKFYRAMLIVGKMDQSANLGDDDIY 291
            QG+S + GRW P +  +LT   T  T SG +S  G K  ++    GK  +S +  + DI 
Sbjct: 885  QGSSSNDGRWPPPVRKLLTSPLTPLTPSGGSSSSGGKSRKSR--AGK--ESQHYKESDIL 940

Query: 290  ETPP 279
            E+PP
Sbjct: 941  ESPP 944