BP920953 |
Clone id |
YMU001_000143_G07 |
Library |
YMU01 |
Length |
530 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000143_G07. |
Accession |
BP920953 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL2197Contig1 |
Sequence |
TTTTTTTTTTTAAAAAGCATACACTCTTCCTTTTCTAAATCCTTCAAAAATAGGAATATC TACAACTTTAAGCCACCCTCAAGATTGAGGAACCCTTATTCAGGGCATTCAACAATTACT GTACAAATTGATCAGATCTCAATGAAGCCATTTGGAAGTTCAGATGAGCAGTGAACTGAC AATCACTGTCTTTCAACAACACCTTACATACCTTAAAATACGTCAATCAATAAAGCCCCC ACAGATTCTTTTTGTGCAAGCACAGACAGCATAAGCATGCTTGCAGCTGTGAAGGTGGAC CTTCCCAAAAGTATAGAGGCAGCAATGAGCCTATATCCTGATCTTCAGCAGTGCCTCCAC AGGCTGCCGACAAATAGGACAGCGATTCATCTGTGACTTAAATGTAGTTGCACAACCATT GCACATGCACATGTGTCGACAAGGCATGACAGCTGTGTCACGAGGCTCGGACATGCATAT TACACATTCCTTTCCAAAGTCTTCTTCATCAATGTCACTTTTGTCTACAG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q7ZUL9 |
Definition |
sp|Q7ZUL9|MGRN1_DANRE Probable E3 ubiquitin-protein ligase MGRN1 OS=Danio rerio |
Align length |
63 |
Score (bit) |
84.0 |
E-value |
4.0e-16 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q2HV40 |
Definition |
tr|Q2HV40|Q2HV40_MEDTR Zinc finger, RING-type OS=Medicago truncatula |
Align length |
63 |
Score (bit) |
105.0 |
E-value |
2.0e-21 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP920953|Adiantum capillus-veneris mRNA, clone: YMU001_000143_G07. (519 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q2HV40|Q2HV40_MEDTR Zinc finger, RING-type OS=Medicago trunca... 105 2e-21 tr|B3U2B1|B3U2B1_CUCSA Zinc finger RING-type protein OS=Cucumis ... 105 2e-21 tr|A7NZI3|A7NZI3_VITVI Chromosome chr6 scaffold_3, whole genome ... 103 5e-21 tr|Q9S752|Q9S752_ARATH Putative uncharacterized protein F11F8.36... 103 7e-21 tr|Q75HV4|Q75HV4_ORYSJ Putative uncharacterized protein OSJNBb00... 100 3e-20 tr|A3B3T0|A3B3T0_ORYSJ Putative uncharacterized protein OS=Oryza... 100 3e-20 tr|A2Y4E4|A2Y4E4_ORYSI Putative uncharacterized protein OS=Oryza... 100 3e-20 tr|A9NUZ8|A9NUZ8_PICSI Putative uncharacterized protein OS=Picea... 99 1e-19 tr|Q8RUJ8|Q8RUJ8_ORYSJ Os10g0204100 protein OS=Oryza sativa subs... 99 1e-19 tr|B8BG37|B8BG37_ORYSI Putative uncharacterized protein OS=Oryza... 99 1e-19 tr|A3C3D3|A3C3D3_ORYSJ Putative uncharacterized protein OS=Oryza... 99 1e-19 tr|Q10NY0|Q10NY0_ORYSJ cDNA clone:J023020P04, full insert sequen... 99 2e-19 tr|Q0DTD5|Q0DTD5_ORYSJ Os03g0254900 protein (Fragment) OS=Oryza ... 99 2e-19 tr|A7PT26|A7PT26_VITVI Chromosome chr8 scaffold_29, whole genome... 99 2e-19 tr|A5B9W9|A5B9W9_VITVI Putative uncharacterized protein OS=Vitis... 99 2e-19 tr|A3ABI1|A3ABI1_ORYSJ Putative uncharacterized protein OS=Oryza... 99 2e-19 tr|A2XEN7|A2XEN7_ORYSI Putative uncharacterized protein OS=Oryza... 99 2e-19 tr|Q9LYW5|Q9LYW5_ARATH Putative uncharacterized protein F15A17_2... 98 3e-19 tr|Q8L8P7|Q8L8P7_ARATH Putative RING zinc finger protein OS=Arab... 98 3e-19 tr|Q8GZ27|Q8GZ27_ARATH Putative uncharacterized protein At5g0320... 98 3e-19 tr|Q9LFH6|Q9LFH6_ARATH Putative uncharacterized protein F4P12_11... 97 4e-19 tr|A9SWZ9|A9SWZ9_PHYPA Predicted protein OS=Physcomitrella paten... 97 4e-19 tr|Q94E82|Q94E82_ORYSJ Mahogunin, ring finger 1-like protein (Os... 97 5e-19 tr|B8A897|B8A897_ORYSI Putative uncharacterized protein OS=Oryza... 97 5e-19 tr|A2ZTA9|A2ZTA9_ORYSJ Putative uncharacterized protein OS=Oryza... 97 5e-19 tr|A2WQ54|A2WQ54_ORYSI Putative uncharacterized protein OS=Oryza... 97 5e-19 tr|A7NWF8|A7NWF8_VITVI Chromosome chr5 scaffold_2, whole genome ... 97 6e-19 tr|A9NRJ5|A9NRJ5_PICSI Putative uncharacterized protein OS=Picea... 95 2e-18 tr|Q29HV8|Q29HV8_DROPS GA22141 OS=Drosophila pseudoobscura pseud... 95 2e-18 tr|B4GY75|B4GY75_DROPE GL19851 OS=Drosophila persimilis GN=GL198... 95 2e-18
>tr|Q2HV40|Q2HV40_MEDTR Zinc finger, RING-type OS=Medicago truncatula GN=MtrDRAFT_AC148995g25v2 PE=4 SV=1 Length = 352
Score = 105 bits (261), Expect = 2e-21 Identities = 43/63 (68%), Positives = 53/63 (84%) Frame = -3
Query: 511 KSDIDEEDFGKECVICMSEPRDTAVMPCRHMCMCNGCATTFKSQMNRCPICRQPVEALLK 332 +SD+D+ + GKECVIC+SEPRDT V PCRHMCMC+GCA + Q NRCPICRQPVE LL+ Sbjct: 286 ESDVDDNEQGKECVICLSEPRDTIVHPCRHMCMCSGCAKVLRFQTNRCPICRQPVERLLE 345
Query: 331 IRI 323 I++ Sbjct: 346 IKV 348
>tr|B3U2B1|B3U2B1_CUCSA Zinc finger RING-type protein OS=Cucumis sativus PE=4 SV=1 Length = 300
Score = 105 bits (261), Expect = 2e-21 Identities = 43/63 (68%), Positives = 52/63 (82%) Frame = -3
Query: 511 KSDIDEEDFGKECVICMSEPRDTAVMPCRHMCMCNGCATTFKSQMNRCPICRQPVEALLK 332 + D+D D GKECVIC+SEPRDT V+PCRHMCMC+GCA + Q NRCPICRQPV+ LL+ Sbjct: 231 EGDVDGNDPGKECVICLSEPRDTTVLPCRHMCMCSGCAKVLRFQTNRCPICRQPVDRLLE 290
Query: 331 IRI 323 IR+ Sbjct: 291 IRV 293
>tr|A7NZI3|A7NZI3_VITVI Chromosome chr6 scaffold_3, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00024522001 PE=4 SV=1 Length = 349
Score = 103 bits (257), Expect = 5e-21 Identities = 43/59 (72%), Positives = 49/59 (83%) Frame = -3
Query: 499 DEEDFGKECVICMSEPRDTAVMPCRHMCMCNGCATTFKSQMNRCPICRQPVEALLKIRI 323 D D GKECVIC+SEPRDT V+PCRHMCMC GCA + QMNRCPICRQPVE LL+I++ Sbjct: 285 DGTDSGKECVICLSEPRDTTVLPCRHMCMCGGCAKVLRFQMNRCPICRQPVEQLLEIKV 343
>tr|Q9S752|Q9S752_ARATH Putative uncharacterized protein F11F8.36 (Putative RING zinc finger protein) OS=Arabidopsis thaliana GN=F8A24.18 PE=2 SV=1 Length = 388
Score = 103 bits (256), Expect = 7e-21 Identities = 44/64 (68%), Positives = 51/64 (79%) Frame = -3
Query: 514 DKSDIDEEDFGKECVICMSEPRDTAVMPCRHMCMCNGCATTFKSQMNRCPICRQPVEALL 335 D S D D GKECVIC+SEPRDT V+PCRHMCMC+GCA + Q NRCPICRQPVE LL Sbjct: 306 DDSADDANDPGKECVICLSEPRDTTVLPCRHMCMCSGCAKVLRFQTNRCPICRQPVERLL 365
Query: 334 KIRI 323 +I++ Sbjct: 366 EIKV 369
>tr|Q75HV4|Q75HV4_ORYSJ Putative uncharacterized protein OSJNBb0092G21.11 (Putative uncharacterized protein P0605G01.1) OS=Oryza sativa subsp. japonica GN=OSJNBb0092G21.11 PE=4 SV=1 Length = 92
Score = 100 bits (250), Expect = 3e-20 Identities = 40/64 (62%), Positives = 52/64 (81%) Frame = -3
Query: 514 DKSDIDEEDFGKECVICMSEPRDTAVMPCRHMCMCNGCATTFKSQMNRCPICRQPVEALL 335 D D D+ D GKECVIC++EPRDTAV PCRH+CMC+ CA T + Q ++CPICRQPVE L+ Sbjct: 24 DVPDADDSDMGKECVICLTEPRDTAVFPCRHLCMCSECAKTLRFQTDKCPICRQPVEKLM 83
Query: 334 KIRI 323 +I++ Sbjct: 84 EIKV 87
>tr|A3B3T0|A3B3T0_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_017702 PE=3 SV=1 Length = 825
Score = 100 bits (250), Expect = 3e-20 Identities = 40/64 (62%), Positives = 52/64 (81%) Frame = -3
Query: 514 DKSDIDEEDFGKECVICMSEPRDTAVMPCRHMCMCNGCATTFKSQMNRCPICRQPVEALL 335 D D D+ D GKECVIC++EPRDTAV PCRH+CMC+ CA T + Q ++CPICRQPVE L+ Sbjct: 757 DVPDADDSDMGKECVICLTEPRDTAVFPCRHLCMCSECAKTLRFQTDKCPICRQPVEKLM 816
Query: 334 KIRI 323 +I++ Sbjct: 817 EIKV 820
>tr|A2Y4E4|A2Y4E4_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_19871 PE=4 SV=1 Length = 359
Score = 100 bits (250), Expect = 3e-20 Identities = 40/64 (62%), Positives = 52/64 (81%) Frame = -3
Query: 514 DKSDIDEEDFGKECVICMSEPRDTAVMPCRHMCMCNGCATTFKSQMNRCPICRQPVEALL 335 D D D+ D GKECVIC++EPRDTAV PCRH+CMC+ CA T + Q ++CPICRQPVE L+ Sbjct: 291 DVPDADDSDMGKECVICLTEPRDTAVFPCRHLCMCSECAKTLRFQTDKCPICRQPVEKLM 350
Query: 334 KIRI 323 +I++ Sbjct: 351 EIKV 354
>tr|A9NUZ8|A9NUZ8_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 380
Score = 99.4 bits (246), Expect = 1e-19 Identities = 41/62 (66%), Positives = 50/62 (80%) Frame = -3
Query: 508 SDIDEEDFGKECVICMSEPRDTAVMPCRHMCMCNGCATTFKSQMNRCPICRQPVEALLKI 329 +D D D GKECVICMSEPRDT V+PCRHMCMC+ CA + Q NRCPICR+PVE L++I Sbjct: 314 TDFDANDPGKECVICMSEPRDTTVLPCRHMCMCSECAKLLRLQTNRCPICRRPVERLMEI 373
Query: 328 RI 323 ++ Sbjct: 374 KL 375
>tr|Q8RUJ8|Q8RUJ8_ORYSJ Os10g0204100 protein OS=Oryza sativa subsp. japonica GN=OSJNBa0004P12.16 PE=4 SV=1 Length = 425
Score = 99.0 bits (245), Expect = 1e-19 Identities = 41/63 (65%), Positives = 50/63 (79%) Frame = -3
Query: 511 KSDIDEEDFGKECVICMSEPRDTAVMPCRHMCMCNGCATTFKSQMNRCPICRQPVEALLK 332 + D + D GKECVIC+SEPRDT V+PCRHMCMC+ CA + Q NRCPICRQPVE LL+ Sbjct: 331 EGDTEGNDPGKECVICLSEPRDTTVLPCRHMCMCSECAKVLRYQTNRCPICRQPVERLLE 390
Query: 331 IRI 323 I++ Sbjct: 391 IKV 393
>tr|B8BG37|B8BG37_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_32999 PE=4 SV=1 Length = 425
Score = 99.0 bits (245), Expect = 1e-19 Identities = 41/63 (65%), Positives = 50/63 (79%) Frame = -3
Query: 511 KSDIDEEDFGKECVICMSEPRDTAVMPCRHMCMCNGCATTFKSQMNRCPICRQPVEALLK 332 + D + D GKECVIC+SEPRDT V+PCRHMCMC+ CA + Q NRCPICRQPVE LL+ Sbjct: 331 EGDTEGNDPGKECVICLSEPRDTTVLPCRHMCMCSECAKVLRYQTNRCPICRQPVERLLE 390
Query: 331 IRI 323 I++ Sbjct: 391 IKV 393
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