BP920958
Clone id YMU001_000143_G12
Library
Length 485
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000143_G12.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
GTAACAACGGCCGAGCCACAAGAACCTCAACTAGAGGCAAATGATCGAGCAAAAGAAAAA
AAAGGTGCCGATTCTAAAGAAGAGGAAGCAGAAGAAACACACGAAGAAGCAACAATGGGT
GGTCTTGCAGAGGTAACATTTGATTTAGCAGGACCCACTCACACAACGTCAAGGAGTTTC
TCTTTGATGCAAAACTAAGCAGGTTGGGTATTAGACGACTAGTGGCAGTACTTGTGGTGG
TTGATCCAGCGAACTACAACACTAATGCAGTAGTTCCATTTTTTTAAAGGAATGATAGAC
TCCACCCACCCCCACAACCCCCACACGAGAGACATGTTGGGAGTTTCGTTAGCTGCATGT
AATTCAAGGATTATATGCGATGTCCCTGCTATTGGAGTCGTTGATGCAAACGCTCTTCTT
CAACCATCTCATCCTCATCATGAGCAAAGCGTAAGAATTTTCAATGTACTAATTTACTAT
TTTAT
■■Homology search results ■■ -
sp_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP920958|Adiantum capillus-veneris mRNA, clone:
YMU001_000143_G12.
(485 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done

***** No hits found ******


tr_hit_id Q752J4
Definition tr|Q752J4|Q752J4_ASHGO AFR580Cp OS=Ashbya gossypii
Align length 52
Score (bit) 33.5
E-value 5.3
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP920958|Adiantum capillus-veneris mRNA, clone:
YMU001_000143_G12.
(485 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q752J4|Q752J4_ASHGO AFR580Cp OS=Ashbya gossypii GN=AFR580C PE... 33 5.3
tr|Q9N468|Q9N468_CAEEL Putative uncharacterized protein OS=Caeno... 33 7.0
tr|B3MPD8|B3MPD8_DROAN GF15254 OS=Drosophila ananassae GN=GF1525... 33 9.1

>tr|Q752J4|Q752J4_ASHGO AFR580Cp OS=Ashbya gossypii GN=AFR580C PE=4
SV=1
Length = 838

Score = 33.5 bits (75), Expect = 5.3
Identities = 16/52 (30%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Frame = +1

Query: 325 TRDMLGVSLAACNSRI-ICDVPAIGVVDANALLQPSHPHHEQSVRIFNVLIY 477
T L + L+ N+ + IC +P I +++A L P + HH +F+VL++
Sbjct: 515 TMARLNIDLSFMNNNLAICTLPIISLLEAEKLSLPPNMHHIHKQMVFDVLLF 566


>tr|Q9N468|Q9N468_CAEEL Putative uncharacterized protein
OS=Caenorhabditis elegans GN=Y34B4A.4 PE=2 SV=1
Length = 877

Score = 33.1 bits (74), Expect = 7.0
Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 3/48 (6%)
Frame = -1

Query: 359 HAANETPNMSLVWGLWGWVESIIPLKKWNYCI---SVVVRWINHHKYC 225
H A N W + ++SI LKKWNY I +VV++ N K C
Sbjct: 806 HGAKNMINFLKRWNQFAILDSIRKLKKWNYDIKKNDIVVQYFNGFKDC 853


>tr|B3MPD8|B3MPD8_DROAN GF15254 OS=Drosophila ananassae GN=GF15254
PE=4 SV=1
Length = 762

Score = 32.7 bits (73), Expect = 9.1
Identities = 11/17 (64%), Positives = 13/17 (76%)
Frame = +3

Query: 300 LHPPPQPPHERHVGSFV 350
LHPPP PPH R + +FV
Sbjct: 97 LHPPPPPPHHREISAFV 113