BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP920960|Adiantum capillus-veneris mRNA, clone:
YMU001_000143_H02.
         (204 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q3ZJ92|RPOC1_PSEAK DNA-directed RNA polymerase subunit beta' ...    29   6.4  

>sp|Q3ZJ92|RPOC1_PSEAK DNA-directed RNA polymerase subunit beta'
            OS=Pseudendoclonium akinetum GN=rpoC1 PE=3 SV=1
          Length = 1578

 Score = 29.3 bits (64), Expect = 6.4
 Identities = 12/22 (54%), Positives = 15/22 (68%)
 Frame = +2

Query: 2    NKIVTSEYNKNSRVQRFYNDIY 67
            NK+  +   +N RVQRFYND Y
Sbjct: 1088 NKLYQTVLFRNKRVQRFYNDYY 1109

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP920960|Adiantum capillus-veneris mRNA, clone:
YMU001_000143_H02.
         (204 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done

 ***** No hits found ******