BP920962 [AcEST]

BP920962
Clone id	YMU001_000143_H04
Library	YMU01
Length	547
Definition	Adiantum capillus-veneris mRNA. clone: YMU001_000143_H04.
Accession	BP920962
Tissue type	prothallium
Developmental stage	-
Contig ID	-
Sequence	TCGCGGCCGAAACGTGTTTCATGGTGACCCAACTCCAAAAGTGCACACTTCTCTATTGAC AGTGTCATGGTGGCAAGCCTTTTACCAAAAGGCTTGTACGGAGAAGGAGAAAGCCGAGAC ATTCAAAATTGGAAACCATGTGGCTAGTGAACCTCTAACAGCAGTGCTATAAAATTGTGT AGATAAAAGTAAGAAGTTGTCACATTTCTAGTGCTTAGAGTATACAAAGGCATTACATTA AAGGGGAATGTTCATGATCTTCTGAAGACAATTGAGGATCTTTACAGTCATACGAGCAGT ACTTCTTGAGATTAAGGCATACATTATACAATCTTCTATAGCCCCTTCAGCTGCTCGGTT AGGTTGACCAAGAAGGTATGCAACACTTATTCCAAGATATAGCTGCTGCAATTTTCACAA GCATTGGTGGATTTTCAGGTATCAAAGTGATGCCTTTTAATAGTGATAACTTACTCTTGT CGTCACTCATGTCTCCCAATTCCCAAGTTTTGAGGCATAATCCACTTTTCCTCTATGCAA TAAAGTG
■■Homology search results ■■	-
Swiss-Prot (release 56.9)	Link to BlastX Result : Swiss-Prot
sp_hit_id	-
Definition	No hits.
Align length	-
Score (bit)	-
E-value	-
Report	BLASTX 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BP920962\|Adiantum capillus-veneris mRNA, clone: YMU001_000143_H04. (547 letters) Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters Searching..................................................done *** No hits found ****
TrEMBL (release 39.9)	Link to BlastX Result : TrEMBL
tr_hit_id	B0DPD6
Definition	tr\|B0DPD6\|B0DPD6_LACBS Predicted protein (Fragment) OS=Laccaria bicolor (strain S238N-H82)
Align length	35
Score (bit)	33.1
E-value	9.8
Report	BLASTX 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BP920962\|Adiantum capillus-veneris mRNA, clone: YMU001_000143_H04. (547 letters) Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value tr\|B0DPD6\|B0DPD6_LACBS Predicted protein (Fragment) OS=Laccaria ... 33 9.8 >tr\|B0DPD6\|B0DPD6_LACBS Predicted protein (Fragment) OS=Laccaria bicolor (strain S238N-H82) GN=LACBIDRAFT_155822 PE=4 SV=1 Length = 1295 Score = 33.1 bits (74), Expect = 9.8 Identities = 17/35 (48%), Positives = 20/35 (57%) Frame = +2 Query: 38 KVHTSLLTVSWWQAFYQKACTEKEKAETFKIGNHV 142 + H +L + WQA YQ C E EK E KIGN V Sbjct: 413 RTHGGMLQLDVWQAEYQDVCKELEKVEG-KIGNAV 446