BP920963
Clone id YMU001_000143_H05
Library
Length 330
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000143_H05.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
AAATACTATAAAGCCCACCAAGCAGACTTCCAAATTTCAAATATCAGGTATCCCACTACA
ATGCCCATTACTACTAATCAACTCACTACACTTGTAATAATTATCAATCCAAAAAAAGAT
GTATAAAGAGACTTGATAGCTCTTGCAACATAATGTGATATCATCTAATTGAAAGCAAAA
ATCGTTTTATTACAAATTACCAAGATTTACATTAGTTTTACAGAAGGGAATGGTCAGGAT
AACTCTTTACACTCGTAACATCTACAATATAAATCAGCTTTGTGTACATTCCAAAGGTGG
GCGCATTCCACGCTCTGATGGGATCCTGAA
■■Homology search results ■■ -
sp_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP920963|Adiantum capillus-veneris mRNA, clone:
YMU001_000143_H05.
(330 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done

***** No hits found ******


tr_hit_id A5KKW3
Definition tr|A5KKW3|A5KKW3_9FIRM Putative uncharacterized protein OS=Ruminococcus torques ATCC 27756
Align length 50
Score (bit) 35.4
E-value 1.5
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP920963|Adiantum capillus-veneris mRNA, clone:
YMU001_000143_H05.
(330 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A5KKW3|A5KKW3_9FIRM Putative uncharacterized protein OS=Rumin... 35 1.5

>tr|A5KKW3|A5KKW3_9FIRM Putative uncharacterized protein
OS=Ruminococcus torques ATCC 27756 GN=RUMTOR_00867 PE=4
SV=1
Length = 303

Score = 35.4 bits (80), Expect = 1.5
Identities = 15/50 (30%), Positives = 26/50 (52%)
Frame = -1

Query: 153 LCCKSYQVSLYIFFWIDNYYKCSELISSNGHCSGIPDI*NLEVCLVGFIV 4
LCCK ++ D+YY S + + + IP ++VC+VGF++
Sbjct: 108 LCCKDVVSEPFLVINADDYYGKSAFKEAYSYLTSIPSADKIQVCMVGFVL 157