BP920969
Clone id YMU001_000144_A01
Library
Length 496
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000144_A01.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
TTTTTTTTAGCTGCAAAATAATCTACATCTGCTAATTGATACAAGAATTCCATGAGAACT
GTACAACGAGTAGAGATATTGCATGGGTTCTGCTGCAAAGCCTTCATCACAATCTAGTCG
CCTTCCAATATTGTCAAAAGAATGCAGCTCATCTATTCTTGAACCTGTGAAAGAGAGCCC
ATAAGGTCCTACATTCCTTAAGCAAACTCAAGCTTAAGTATTGCAACTGTATGTGCAACT
ACATCTATGTGCACCATCCAAGACGAAGGAAAGCACTTCCCCAAATCCTGCTTTTTAGCT
GAAAGAAAGGCTTGCACCCCCTACCTTGGCTGTCTTACGGGCTCGCTCTCTGCGTCACAC
TAGGCAAACAGGAGAACATCATGAGGGGCCATAATAAATTCACAGTGAATGGGATTCATA
TCCCAGATACAAACAAGGAGAGTTCTAGCGTACAGAATGCACGCAAGAATCCTCAAGACC
CTGGTAGAGACGAATC
■■Homology search results ■■ -
sp_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP920969|Adiantum capillus-veneris mRNA, clone:
YMU001_000144_A01.
(496 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done

***** No hits found ******


tr_hit_id Q9CGH4
Definition tr|Q9CGH4|Q9CGH4_LACLA DNA-3-methyladenine glycosidase I OS=Lactococcus lactis subsp. lactis
Align length 41
Score (bit) 33.5
E-value 5.6
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP920969|Adiantum capillus-veneris mRNA, clone:
YMU001_000144_A01.
(496 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q9CGH4|Q9CGH4_LACLA DNA-3-methyladenine glycosidase I OS=Lact... 33 5.6
tr|Q54S93|Q54S93_DICDI Putative actin binding protein OS=Dictyos... 33 9.5
tr|Q0BZC2|Q0BZC2_HYPNA Putative sulfur oxidation diheme cytochro... 33 9.8
tr|A6UPS9|A6UPS9_METVS Putative uncharacterized protein OS=Metha... 33 9.8

>tr|Q9CGH4|Q9CGH4_LACLA DNA-3-methyladenine glycosidase I
OS=Lactococcus lactis subsp. lactis GN=tag PE=4 SV=1
Length = 190

Score = 33.5 bits (75), Expect = 5.6
Identities = 16/41 (39%), Positives = 21/41 (51%)
Frame = +3

Query: 339 GLALCVTLGKQENIMRGHNKFTVNGIHIPDTNKESSSVQNA 461
GL+ L KQEN + F + I + D NKE +QNA
Sbjct: 46 GLSWATILNKQENFYEAFDNFEIEKIAVYDENKEQELLQNA 86


>tr|Q54S93|Q54S93_DICDI Putative actin binding protein
OS=Dictyostelium discoideum GN=gmfA PE=4 SV=1
Length = 138

Score = 32.7 bits (73), Expect = 9.5
Identities = 19/63 (30%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Frame = +3

Query: 240 YIYVH-HPRRRKALPQILLFS*KKGLHPLPWLSYGLALCVTLGKQENIMRGHNKFTVNGI 416
Y+Y H HP R++ P + ++ KG+ P ++Y + + K E IM+ N TV +
Sbjct: 67 YVYKHTHPDGRQSFPMVFIYFMPKGISPAVAMTYSANKEILVNKLE-IMKSFNAETVETL 125

Query: 417 HIP 425
P
Sbjct: 126 TEP 128


>tr|Q0BZC2|Q0BZC2_HYPNA Putative sulfur oxidation diheme cytochrome
SoxA OS=Hyphomonas neptunium (strain ATCC 15444)
GN=HNE_2476 PE=4 SV=1
Length = 264

Score = 32.7 bits (73), Expect = 9.8
Identities = 18/44 (40%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Frame = -2

Query: 183 YGLSFTGSRIDELHSFDNIGRRL-DCDEGFAAEPMQYLYSLYSS 55
+G +F R+ E +F ++ RRL DCD G AEP+ Y LY++
Sbjct: 201 HGNAFPAYRL-EWQAFGSLHRRLRDCDAGIRAEPLDYGSELYTA 243


>tr|A6UPS9|A6UPS9_METVS Putative uncharacterized protein
OS=Methanococcus vannielii (strain SB / ATCC 35089 / DSM
1224) GN=Mevan_0595 PE=3 SV=1
Length = 270

Score = 32.7 bits (73), Expect = 9.8
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = -2

Query: 168 TGSRIDELHSFDNIGRRLDCDEGFAAEPMQYLYSLYSSH 52
T I ELH +D+IG+ +C+ AAE + S+ +H
Sbjct: 98 TKGYIIELHGYDHIGQEFNCNASIAAEKLDKSLSILENH 136