BP920971
Clone id YMU001_000144_A05
Library
Length 501
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000144_A05.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
ATTCTTAAAGCAGTGCCATCTTGCAAAGCCATGTCATATGCTTTTATAGCTACACCATCT
TTCTGAAAAGTCCTTCAAACTCTTTCTTGCACAGCATTATGCATAATGTTTTCCCATGCA
TTTCTGTGTATGCATAAATAGGGTGTCCCACCATTGGACATATGCATTAGACACACTTTT
GCTTCCACCTATGCACCTTGAGTGGACTACAACAGGCAAACCAATGTTCCATCATACTAC
CCTTTCATATTTGCTACCATTTTAATTCCATATCTATCAGCAAATAATCCCTTGAGTACT
TTATTAATATCTCCCATGCTAATAAGTACCTCAATAATGCACGTATCCCAAAGGCACTTT
TTTTCCACTGGGTTTTTTCCCTTTAGCCATCCAGGTATTAGACCCTGATTTAGAACCTCA
TCATTCTACTTCCCTTGTACATACTTTTCATACATAAACAGTAGCCTCATCATTATGCTA
TTACATCGGACAAATGCAACA
■■Homology search results ■■ -
sp_hit_id Q8NGK2
Definition sp|Q8NGK2|O52B4_HUMAN Olfactory receptor 52B4 OS=Homo sapiens
Align length 88
Score (bit) 32.3
E-value 1.3
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP920971|Adiantum capillus-veneris mRNA, clone:
YMU001_000144_A05.
(501 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q8NGK2|O52B4_HUMAN Olfactory receptor 52B4 OS=Homo sapiens GN... 32 1.3
sp|Q2H0S0|IML1_CHAGB Vacuolar membrane-associated protein IML1 O... 30 4.8
sp|Q8BM81|ADCL4_MOUSE Arylacetamide deacetylase-like 4 OS=Mus mu... 30 8.2

>sp|Q8NGK2|O52B4_HUMAN Olfactory receptor 52B4 OS=Homo sapiens
GN=OR52B4 PE=2 SV=2
Length = 314

Score = 32.3 bits (72), Expect = 1.3
Identities = 28/88 (31%), Positives = 41/88 (46%), Gaps = 13/88 (14%)
Frame = +3

Query: 147 PTIGHMH*THFCFHLCTLSGLQQANQCSIILPFHICYHF----NS----ISISK*SLE-- 296
PT+ H +H FHL + GLQ + I +PF I Y NS I ++K SL
Sbjct: 2 PTVNHSGTSHTVFHLLGIPGLQDQHMW-ISIPFFISYVTALLGNSLLIFIILTKRSLHEP 60

Query: 297 ---YFINISHANKYLNNARIPKALFFHW 371
+ ++ A+ L+ IP+AL W
Sbjct: 61 MYLFLCMLAGADIVLSTCTIPQALAIFW 88


>sp|Q2H0S0|IML1_CHAGB Vacuolar membrane-associated protein IML1
OS=Chaetomium globosum GN=IML1 PE=3 SV=1
Length = 1889

Score = 30.4 bits (67), Expect = 4.8
Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Frame = +3

Query: 240 PFHI--CYHFNSISISK*SLEYFINISHANKYLNNARIPKALFFH 368
P H CY N++ S+ S +F + N + NAR+P+ LF H
Sbjct: 640 PLHTDPCYPLNAVLASQISKPHFDLDNDGNVIIPNARVPETLFDH 684


>sp|Q8BM81|ADCL4_MOUSE Arylacetamide deacetylase-like 4 OS=Mus
musculus GN=Aadacl4 PE=2 SV=2
Length = 407

Score = 29.6 bits (65), Expect = 8.2
Identities = 16/36 (44%), Positives = 22/36 (61%), Gaps = 2/36 (5%)
Frame = +3

Query: 174 HFCFHLCTLSG--LQQANQCSIILPFHICYHFNSIS 275
HFCFHL T G L++ N CS +P C+ +S+S
Sbjct: 47 HFCFHLTTTWGHILEKMNICS--MPQFFCFLQDSLS 80


tr_hit_id Q4KHV2
Definition tr|Q4KHV2|Q4KHV2_PSEF5 General amino acid ABC transporter, permease protein OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477)
Align length 39
Score (bit) 33.5
E-value 5.7
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP920971|Adiantum capillus-veneris mRNA, clone:
YMU001_000144_A05.
(501 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q4KHV2|Q4KHV2_PSEF5 General amino acid ABC transporter, perme... 33 5.7
tr|Q4Z1G3|Q4Z1G3_PLABE Putative uncharacterized protein (Fragmen... 33 5.7
tr|B1HSZ9|B1HSZ9_LYSSC Dipeptide-binding protein dppE OS=Lysinib... 33 9.7
tr|A3I9D1|A3I9D1_9BACI Oligopeptide ABC transporter (Oligopeptid... 33 9.7

>tr|Q4KHV2|Q4KHV2_PSEF5 General amino acid ABC transporter, permease
protein OS=Pseudomonas fluorescens (strain Pf-5 / ATCC
BAA-477) GN=PFL_1050 PE=3 SV=1
Length = 365

Score = 33.5 bits (75), Expect = 5.7
Identities = 15/39 (38%), Positives = 25/39 (64%), Gaps = 2/39 (5%)
Frame = -3

Query: 223 WFAC--CSPLKVHRWKQKCV*CICPMVGHPIYAYTEMHG 113
W A +PL + R+ +K + +C +VG+PI AY+ +HG
Sbjct: 104 WLAVIGAAPLFISRFPRKAIYGLCFLVGYPIIAYSLLHG 142


>tr|Q4Z1G3|Q4Z1G3_PLABE Putative uncharacterized protein (Fragment)
OS=Plasmodium berghei GN=PB000383.01.0 PE=4 SV=1
Length = 559

Score = 33.5 bits (75), Expect = 5.7
Identities = 17/40 (42%), Positives = 26/40 (65%)
Frame = +3

Query: 243 FHICYHFNSISISK*SLEYFINISHANKYLNNARIPKALF 362
FH +H NS+SIS +L Y +NI + Y+NN +I ++F
Sbjct: 74 FHSIFHKNSLSIS--TLNYLMNIIIRSLYMNNDKIYPSVF 111


>tr|B1HSZ9|B1HSZ9_LYSSC Dipeptide-binding protein dppE
OS=Lysinibacillus sphaericus (strain C3-41) GN=dppE PE=4
SV=1
Length = 558

Score = 32.7 bits (73), Expect = 9.7
Identities = 13/25 (52%), Positives = 17/25 (68%)
Frame = +3

Query: 297 YFINISHANKYLNNARIPKALFFHW 371
YFI ++H NKYL+N I KA+ W
Sbjct: 311 YFIRMNHENKYLSNLNIRKAIDMAW 335


>tr|A3I9D1|A3I9D1_9BACI Oligopeptide ABC transporter
(Oligopeptide-binding protein) OS=Bacillus sp. B14905
GN=BB14905_07269 PE=4 SV=1
Length = 560

Score = 32.7 bits (73), Expect = 9.7
Identities = 13/25 (52%), Positives = 17/25 (68%)
Frame = +3

Query: 297 YFINISHANKYLNNARIPKALFFHW 371
YFI ++H NKYL+N I KA+ W
Sbjct: 313 YFIRMNHENKYLSNLNIRKAIDMAW 337