BP920974
Clone id YMU001_000144_A08
Library
Length 225
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000144_A08.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
GAGTCTTCTAAAGAGGAGGTCCAGGCTAGATTGGAGTAATTTTCATTTAGCAATCCAGCC
CTTGTTCACCACAGTTGTCACATACATAGATTCTATGTAGCTCTCTCAACGTGGTGGAAT
TGGAGTCACCATTTTTGATCTTTGTACGATGTACAATAAGCAGTATTTGGTGGTCTAGCA
ATCTGTAATTCTGATATGACCATATATACTGACTAAGTGTCTCAA
■■Homology search results ■■ -
sp_hit_id Q96JB6
Definition sp|Q96JB6|LOXL4_HUMAN Lysyl oxidase homolog 4 OS=Homo sapiens
Align length 53
Score (bit) 30.0
E-value 3.7
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP920974|Adiantum capillus-veneris mRNA, clone:
YMU001_000144_A08.
(225 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q96JB6|LOXL4_HUMAN Lysyl oxidase homolog 4 OS=Homo sapiens GN... 30 3.7
sp|Q8MJ24|LOXL4_BOVIN Lysyl oxidase homolog 4 OS=Bos taurus GN=L... 29 6.3

>sp|Q96JB6|LOXL4_HUMAN Lysyl oxidase homolog 4 OS=Homo sapiens
GN=LOXL4 PE=1 SV=1
Length = 756

Score = 30.0 bits (66), Expect = 3.7
Identities = 17/53 (32%), Positives = 25/53 (47%), Gaps = 6/53 (11%)
Frame = -3

Query: 196 YQNYRLLDHQILLIVHRTKIKNGDSNSTTLRE------LHRIYVCDNCGEQGL 56
Y + + H LL ++ +K+ G S L + L R Y C N GEQG+
Sbjct: 614 YHSIEVFTHYDLLTLNGSKVAEGHKASFCLEDTNCPTGLQRRYACANFGEQGV 666


>sp|Q8MJ24|LOXL4_BOVIN Lysyl oxidase homolog 4 OS=Bos taurus
GN=LOXL4 PE=2 SV=1
Length = 757

Score = 29.3 bits (64), Expect = 6.3
Identities = 16/53 (30%), Positives = 25/53 (47%), Gaps = 6/53 (11%)
Frame = -3

Query: 196 YQNYRLLDHQILLIVHRTKIKNGDSNSTTLRE------LHRIYVCDNCGEQGL 56
Y + + H LL ++ +K+ G S L + + R Y C N GEQG+
Sbjct: 615 YHSIEVFTHYDLLTLNGSKVAEGHKASFCLEDTNCPTGMQRRYACANFGEQGV 667


tr_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP920974|Adiantum capillus-veneris mRNA, clone:
YMU001_000144_A08.
(225 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done

***** No hits found ******