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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP920982
Clone id YMU001_000144_B05
Library
Length 563
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000144_B05.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
CAAATGCAAACATCTGTTTGAAGTAAACCAATGTGGCGGGTGCCTATCCTTGTATCGACA
ATGTCATCCACCATGAACGCGATTTCCTTTCAAGGAAATGGCAGCTTTACAGACTTTGGA
GGCATCTCTCATTCATTTTGAGAAACAAATCTCCATGGACATGAAGCTACCATCAATATC
TCTACATTCATTCCAAACAAGAATTACCCATTAGCGCAAAGAAACCATCAATAACGTAAA
TCCACCTACATTAACACAAGATTACAAAGGGGTTGTCATCGTATAATTGCTTGATCTTGT
CAACTCTCTTTCACTGCGCCTGACACGGTACATCTTGTGGGCACAAATACGTACCTCCTC
ATGCACGAGTGTGGTCAATTTGTGCTACATCTAACACCTGCAGCTACGTCACTTGAAGGA
AGAAAAAAGATTAACAAGCAAAGCACTAGCACTCTAACCTCTCCATGTTGCACCAACTCC
CTACACCCTATAAGCTCGAATAGACCCACAGAGCAAGAAGTTGCACCAAAGTCTTACGCC
CAGGCAAACAAGCAAGCGATGCG
■■Homology search results ■■ -
sp_hit_id P38096
Definition sp|P38096|LAMB_EMENI Lactam utilization protein lamB OS=Emericella nidulans
Align length 65
Score (bit) 30.0
E-value 8.2
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP920982|Adiantum capillus-veneris mRNA, clone:
YMU001_000144_B05.
         (563 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P38096|LAMB_EMENI Lactam utilization protein lamB OS=Emericel...    30   8.2  

>sp|P38096|LAMB_EMENI Lactam utilization protein lamB OS=Emericella
           nidulans GN=lamB PE=2 SV=1
          Length = 262

 Score = 30.0 bits (66), Expect = 8.2
 Identities = 20/65 (30%), Positives = 30/65 (46%)
 Frame = -3

Query: 510 CGSIRAYRV*GVGATWRG*SASALLVNLFSSFK*RSCRC*M*HKLTTLVHEEVRICAHKM 331
           C S+ A R  G    WR  S ++L ++L  +    SCRC +   +   V   +R+   K 
Sbjct: 177 CLSLTARRSHGTLRMWRSMSGNSLRISLSRALMELSCRCRLKIMMCPFVVIPIRLAVLKS 236

Query: 330 YRVRR 316
            R RR
Sbjct: 237 SRQRR 241
tr_hit_id Q2PG75
Definition tr|Q2PG75|Q2PG75_XENLA Xnr5-9 OS=Xenopus laevis
Align length 66
Score (bit) 34.7
E-value 3.7
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP920982|Adiantum capillus-veneris mRNA, clone:
YMU001_000144_B05.
         (563 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q2PG75|Q2PG75_XENLA Xnr5-9 OS=Xenopus laevis GN=Xnr5-9 PE=2 SV=1    35   3.7  
tr|Q2PG66|Q2PG66_XENLA Xnr5-2 OS=Xenopus laevis GN=nodal5.1 PE=2...    35   3.7  
tr|B7ZQI8|B7ZQI8_XENLA Xnr5-9 protein OS=Xenopus laevis GN=xnr5-...    35   3.7  
tr|B7ZQI6|B7ZQI6_XENLA Xnr5-9 protein OS=Xenopus laevis GN=xnr5-...    35   3.7  
tr|A5DFL5|A5DFL5_PICGU Putative uncharacterized protein OS=Pichi...    34   4.8  
tr|Q9LE53|Q9LE53_ARATH Gb|AAF34834.1 OS=Arabidopsis thaliana GN=...    33   8.2  
tr|Q5BPR0|Q5BPR0_ARATH Putative uncharacterized protein OS=Arabi...    33   8.2  

>tr|Q2PG75|Q2PG75_XENLA Xnr5-9 OS=Xenopus laevis GN=Xnr5-9 PE=2 SV=1
          Length = 384

 Score = 34.7 bits (78), Expect = 3.7
 Identities = 21/66 (31%), Positives = 31/66 (46%)
 Frame = +2

Query: 65  HPP*TRFPFKEMAALQTLEASLIHFEKQISMDMKLPSISLHSFQTRITH*RKETINNVNP 244
           H    RFP +     Q L+ASL+H  K++  DMK P   +H +Q  ++   K+      P
Sbjct: 24  HSKEVRFPLQGFT--QRLKASLVHHGKRLPHDMKYPVYMMHMYQNLMSGKFKDLSIQGEP 81

Query: 245 PTLTQD 262
             L  D
Sbjct: 82  ALLESD 87


>tr|Q2PG66|Q2PG66_XENLA Xnr5-2 OS=Xenopus laevis GN=nodal5.1 PE=2
           SV=1
          Length = 384

 Score = 34.7 bits (78), Expect = 3.7
 Identities = 21/66 (31%), Positives = 31/66 (46%)
 Frame = +2

Query: 65  HPP*TRFPFKEMAALQTLEASLIHFEKQISMDMKLPSISLHSFQTRITH*RKETINNVNP 244
           H    RFP +     Q L+ASL+H  K++  DMK P   +H +Q  ++   K+      P
Sbjct: 24  HSKEVRFPLQGFT--QRLKASLVHHGKRLPHDMKYPVYMMHMYQNLMSGKFKDLSIQGEP 81

Query: 245 PTLTQD 262
             L  D
Sbjct: 82  ALLESD 87


>tr|B7ZQI8|B7ZQI8_XENLA Xnr5-9 protein OS=Xenopus laevis GN=xnr5-9
           PE=2 SV=1
          Length = 384

 Score = 34.7 bits (78), Expect = 3.7
 Identities = 21/66 (31%), Positives = 31/66 (46%)
 Frame = +2

Query: 65  HPP*TRFPFKEMAALQTLEASLIHFEKQISMDMKLPSISLHSFQTRITH*RKETINNVNP 244
           H    RFP +     Q L+ASL+H  K++  DMK P   +H +Q  ++   K+      P
Sbjct: 24  HSKEVRFPLQGFT--QRLKASLVHHGKRLPHDMKYPVYMMHMYQNLMSGKFKDLSIQGEP 81

Query: 245 PTLTQD 262
             L  D
Sbjct: 82  ALLESD 87


>tr|B7ZQI6|B7ZQI6_XENLA Xnr5-9 protein OS=Xenopus laevis GN=xnr5-9
           PE=2 SV=1
          Length = 384

 Score = 34.7 bits (78), Expect = 3.7
 Identities = 21/66 (31%), Positives = 31/66 (46%)
 Frame = +2

Query: 65  HPP*TRFPFKEMAALQTLEASLIHFEKQISMDMKLPSISLHSFQTRITH*RKETINNVNP 244
           H    RFP +     Q L+ASL+H  K++  DMK P   +H +Q  ++   K+      P
Sbjct: 24  HSKEVRFPLQGFT--QRLKASLVHHGKRLPHDMKYPVYMMHMYQNLMSGKFKDLSIQGEP 81

Query: 245 PTLTQD 262
             L  D
Sbjct: 82  ALLESD 87


>tr|A5DFL5|A5DFL5_PICGU Putative uncharacterized protein OS=Pichia
           guilliermondii GN=PGUG_02066 PE=4 SV=2
          Length = 444

 Score = 34.3 bits (77), Expect = 4.8
 Identities = 16/44 (36%), Positives = 24/44 (54%)
 Frame = -2

Query: 397 VLDVAQIDHTRA*GGTYLCPQDVPCQAQ*KRVDKIKQLYDDNPF 266
           V+D  + +   A G T   PQ  P + Q   +D++K LYD+ PF
Sbjct: 293 VIDDEEEEEEEADGQTRSAPQSAPTENQLSTIDELKTLYDEMPF 336


>tr|Q9LE53|Q9LE53_ARATH Gb|AAF34834.1 OS=Arabidopsis thaliana
           GN=At3g15250 PE=4 SV=1
          Length = 217

 Score = 33.5 bits (75), Expect = 8.2
 Identities = 21/61 (34%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
 Frame = +1

Query: 373 GQFVLHLTPAATSLEGRKKINKQSTSTLTSPC-CTNSLHPISSNRPTEQEVAPKSYAQAN 549
           G+ + H  PAA+S+  ++ I+  +TS  TS C  TNS     SN  +  +    SY+ +N
Sbjct: 45  GRLLPHAFPAASSIYTKRSIS-STTSEYTSRCNSTNSSSSFGSNNSSTSQSPRTSYSTSN 103

Query: 550 K 552
           K
Sbjct: 104 K 104


>tr|Q5BPR0|Q5BPR0_ARATH Putative uncharacterized protein
           OS=Arabidopsis thaliana GN=At3g15250 PE=4 SV=1
          Length = 226

 Score = 33.5 bits (75), Expect = 8.2
 Identities = 21/61 (34%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
 Frame = +1

Query: 373 GQFVLHLTPAATSLEGRKKINKQSTSTLTSPC-CTNSLHPISSNRPTEQEVAPKSYAQAN 549
           G+ + H  PAA+S+  ++ I+  +TS  TS C  TNS     SN  +  +    SY+ +N
Sbjct: 45  GRLLPHAFPAASSIYTKRSIS-STTSEYTSRCNSTNSSSSFGSNNSSTSQSPRTSYSTSN 103

Query: 550 K 552
           K
Sbjct: 104 K 104