BP920983 |
Clone id |
YMU001_000144_B06 |
Library |
YMU01 |
Length |
263 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000144_B06. |
Accession |
BP920983 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL417Contig1 |
Sequence |
GCAAAAGAGACTTTCGCTTTGGATGGATTATCTAAATCAACTGCACACATGATTATATCT CCAACACCAAAGACGCCTCCATAACCAGTGAAATCTCCACCATGTGAAAACTTCCCGGTT CCTCCATAGCCAAAACTAGTGCTGCTTTCACCAAGACTGCCAACATCACTGTCACCTCTA GACAGACCCACTCTACAAAGGTTCTGCTGATCCTTGGCAGTATCCTCCATGATTACTTGC TGATTCTCAATCACTCGACATCC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q5XH91 |
Definition |
sp|Q5XH91|DDX1_XENTR ATP-dependent RNA helicase DDX1 OS=Xenopus tropicalis |
Align length |
81 |
Score (bit) |
41.6 |
E-value |
0.001 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q7XQR8 |
Definition |
tr|Q7XQR8|Q7XQR8_ORYSJ OSJNBa0043L09.29 protein OS=Oryza sativa subsp. japonica |
Align length |
87 |
Score (bit) |
94.0 |
E-value |
3.0e-18 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP920983|Adiantum capillus-veneris mRNA, clone: YMU001_000144_B06. (263 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q7XQR8|Q7XQR8_ORYSJ OSJNBa0043L09.29 protein OS=Oryza sativa ... 94 3e-18 tr|Q25AA2|Q25AA2_ORYSA H0410G08.12 protein OS=Oryza sativa GN=H0... 94 3e-18 tr|Q0J9R0|Q0J9R0_ORYSJ Os04g0636000 protein OS=Oryza sativa subs... 94 3e-18 tr|A3AXT1|A3AXT1_ORYSJ Putative uncharacterized protein OS=Oryza... 94 3e-18 tr|B6UEN0|B6UEN0_MAIZE Heterogeneous nuclear ribonucleoprotein U... 88 2e-16 tr|B6UCI9|B6UCI9_MAIZE Heterogeneous nuclear ribonucleoprotein U... 88 2e-16 tr|A7QYI0|A7QYI0_VITVI Chromosome undetermined scaffold_247, who... 87 5e-16 tr|A5C821|A5C821_VITVI Putative uncharacterized protein OS=Vitis... 87 5e-16 tr|B6KKR9|B6KKR9_TOXGO SPRY domain-containing protein OS=Toxopla... 45 0.002 tr|A8NWC9|A8NWC9_BRUMA ATP-dependent helicase DDX1, putative OS=... 42 0.012 tr|B3RV64|B3RV64_TRIAD Putative uncharacterized protein OS=Trich... 42 0.015 tr|Q5TYW3|Q5TYW3_DANRE Novel protein similar to vertebrate DEAD ... 42 0.020 tr|B6M213|B6M213_BRAFL Putative uncharacterized protein OS=Branc... 41 0.034 tr|B6M1Z5|B6M1Z5_BRAFL Putative uncharacterized protein OS=Branc... 41 0.034 tr|A4RZH0|A4RZH0_OSTLU Predicted protein OS=Ostreococcus lucimar... 40 0.058 tr|Q6NUT5|Q6NUT5_DANRE Heterogeneous nuclear ribonucleoprotein U... 39 0.099 tr|Q1L9A1|Q1L9A1_DANRE Novel protein (Zgc:85971) OS=Danio rerio ... 39 0.099 tr|Q4RRA7|Q4RRA7_TETNG Chromosome 14 SCAF15003, whole genome sho... 39 0.17 tr|Q4RFS1|Q4RFS1_TETNG Chromosome 16 SCAF15113, whole genome sho... 39 0.17 tr|Q1JSZ1|Q1JSZ1_TOXGO ATP-dependent RNA helicase, putative OS=T... 39 0.17 tr|B6KNY4|B6KNY4_TOXGO ATP-dependent RNA helicase DDX family pro... 39 0.17 tr|A7E3W7|A7E3W7_BOVIN DEAD (Asp-Glu-Ala-Asp) box polypeptide 1 ... 38 0.22 tr|Q17I24|Q17I24_AEDAE DEAD box ATP-dependent RNA helicase OS=Ae... 38 0.22 tr|B4DPN6|B4DPN6_HUMAN cDNA FLJ51031, highly similar to ATP-depe... 38 0.22 tr|B4DME8|B4DME8_HUMAN cDNA FLJ57326, highly similar to ATP-depe... 38 0.22 tr|A3RJH1|A3RJH1_HUMAN DEAD box polypeptide 1 OS=Homo sapiens GN... 38 0.22 tr|B4H8N8|B4H8N8_DROPE GL25427 OS=Drosophila persimilis GN=GL254... 38 0.29 tr|A7RMK9|A7RMK9_NEMVE Predicted protein OS=Nematostella vectens... 38 0.29 tr|Q016C1|Q016C1_OSTTA DEAD-box protein abstrakt (ISS) OS=Ostreo... 37 0.38 tr|B7P318|B7P318_IXOSC E1b-55kD-associated protein, putative (Fr... 37 0.38
>tr|Q7XQR8|Q7XQR8_ORYSJ OSJNBa0043L09.29 protein OS=Oryza sativa subsp. japonica GN=OSJNBa0043L09.29 PE=4 SV=2 Length = 717
Score = 94.0 bits (232), Expect = 3e-18 Identities = 46/87 (52%), Positives = 57/87 (65%) Frame = -1
Query: 263 GCRVIENQQVIMEDTAKDQQNLCRVGLSRGDSDVGSLGESSTSFGYGGTGKFSHXXXXXX 84 GC+V+ Q V MEDTA DQQ+LCRVG+SRG VG+LGE+ SFG+GGTGKFSH Sbjct: 85 GCKVVAEQAVEMEDTAADQQHLCRVGVSRGGDPVGALGETGHSFGFGGTGKFSHQGKFVE 144
Query: 83 XXXXXXXXDIIMCAVDLDNPSKAKVSF 3 D ++CAVDLD+ A + F Sbjct: 145 YGVKFGVGDTVVCAVDLDSKPLASIGF 171
>tr|Q25AA2|Q25AA2_ORYSA H0410G08.12 protein OS=Oryza sativa GN=H0410G08.12 PE=4 SV=1 Length = 717
Score = 94.0 bits (232), Expect = 3e-18 Identities = 46/87 (52%), Positives = 57/87 (65%) Frame = -1
Query: 263 GCRVIENQQVIMEDTAKDQQNLCRVGLSRGDSDVGSLGESSTSFGYGGTGKFSHXXXXXX 84 GC+V+ Q V MEDTA DQQ+LCRVG+SRG VG+LGE+ SFG+GGTGKFSH Sbjct: 85 GCKVVAEQAVEMEDTAADQQHLCRVGVSRGGDPVGALGETGHSFGFGGTGKFSHQGKFVE 144
Query: 83 XXXXXXXXDIIMCAVDLDNPSKAKVSF 3 D ++CAVDLD+ A + F Sbjct: 145 YGVKFGVGDTVVCAVDLDSKPLASIGF 171
>tr|Q0J9R0|Q0J9R0_ORYSJ Os04g0636000 protein OS=Oryza sativa subsp. japonica GN=Os04g0636000 PE=4 SV=1 Length = 717
Score = 94.0 bits (232), Expect = 3e-18 Identities = 46/87 (52%), Positives = 57/87 (65%) Frame = -1
Query: 263 GCRVIENQQVIMEDTAKDQQNLCRVGLSRGDSDVGSLGESSTSFGYGGTGKFSHXXXXXX 84 GC+V+ Q V MEDTA DQQ+LCRVG+SRG VG+LGE+ SFG+GGTGKFSH Sbjct: 85 GCKVVAEQAVEMEDTAADQQHLCRVGVSRGGDPVGALGETGHSFGFGGTGKFSHQGKFVE 144
Query: 83 XXXXXXXXDIIMCAVDLDNPSKAKVSF 3 D ++CAVDLD+ A + F Sbjct: 145 YGVKFGVGDTVVCAVDLDSKPLASIGF 171
>tr|A3AXT1|A3AXT1_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_015603 PE=4 SV=1 Length = 745
Score = 94.0 bits (232), Expect = 3e-18 Identities = 46/87 (52%), Positives = 57/87 (65%) Frame = -1
Query: 263 GCRVIENQQVIMEDTAKDQQNLCRVGLSRGDSDVGSLGESSTSFGYGGTGKFSHXXXXXX 84 GC+V+ Q V MEDTA DQQ+LCRVG+SRG VG+LGE+ SFG+GGTGKFSH Sbjct: 113 GCKVVAEQAVEMEDTAADQQHLCRVGVSRGGDPVGALGETGHSFGFGGTGKFSHQGKFVE 172
Query: 83 XXXXXXXXDIIMCAVDLDNPSKAKVSF 3 D ++CAVDLD+ A + F Sbjct: 173 YGVKFGVGDTVVCAVDLDSKPLASIGF 199
>tr|B6UEN0|B6UEN0_MAIZE Heterogeneous nuclear ribonucleoprotein U-like protein 1 OS=Zea mays PE=2 SV=1 Length = 625
Score = 88.2 bits (217), Expect = 2e-16 Identities = 41/87 (47%), Positives = 55/87 (63%) Frame = -1
Query: 263 GCRVIENQQVIMEDTAKDQQNLCRVGLSRGDSDVGSLGESSTSFGYGGTGKFSHXXXXXX 84 GCR++ Q V M+ T +++LCR+G+SRGD VG+LGES SFG+GGTGKFSH Sbjct: 83 GCRIVAEQPVEMDPTTSGERHLCRIGVSRGDDPVGALGESQHSFGFGGTGKFSHQRRFVN 142
Query: 83 XXXXXXXXDIIMCAVDLDNPSKAKVSF 3 D ++CAVDLD+ A + F Sbjct: 143 YGVKFGVGDTVVCAVDLDSKPMASIGF 169
>tr|B6UCI9|B6UCI9_MAIZE Heterogeneous nuclear ribonucleoprotein U-like protein 1 OS=Zea mays PE=2 SV=1 Length = 663
Score = 88.2 bits (217), Expect = 2e-16 Identities = 41/87 (47%), Positives = 55/87 (63%) Frame = -1
Query: 263 GCRVIENQQVIMEDTAKDQQNLCRVGLSRGDSDVGSLGESSTSFGYGGTGKFSHXXXXXX 84 GCR++ Q V M+ T +++LCR+G+SRGD VG+LGES SFG+GGTGKFSH Sbjct: 83 GCRIVAEQPVEMDPTTSGERHLCRIGVSRGDDPVGALGESQHSFGFGGTGKFSHQRRFVN 142
Query: 83 XXXXXXXXDIIMCAVDLDNPSKAKVSF 3 D ++CAVDLD+ A + F Sbjct: 143 YGVKFGVGDTVVCAVDLDSKPMASIGF 169
>tr|A7QYI0|A7QYI0_VITVI Chromosome undetermined scaffold_247, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00009742001 PE=4 SV=1 Length = 489
Score = 86.7 bits (213), Expect = 5e-16 Identities = 43/87 (49%), Positives = 56/87 (64%) Frame = -1
Query: 263 GCRVIENQQVIMEDTAKDQQNLCRVGLSRGDSDVGSLGESSTSFGYGGTGKFSHXXXXXX 84 GC++I Q V MEDT DQQ++CR+G+SRGD VG+LGE+ SFG+GGTGKFS Sbjct: 84 GCKIISTQPVDMEDTPPDQQHVCRLGISRGDDAVGNLGETEHSFGFGGTGKFSVAGKFSN 143
Query: 83 XXXXXXXXDIIMCAVDLDNPSKAKVSF 3 D I+CAV+L+ A +SF Sbjct: 144 YGEKFGVGDTIVCAVNLETKPLASISF 170
>tr|A5C821|A5C821_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_016567 PE=4 SV=1 Length = 1021
Score = 86.7 bits (213), Expect = 5e-16 Identities = 43/87 (49%), Positives = 56/87 (64%) Frame = -1
Query: 263 GCRVIENQQVIMEDTAKDQQNLCRVGLSRGDSDVGSLGESSTSFGYGGTGKFSHXXXXXX 84 GC++I Q V MEDT DQQ++CR+G+SRGD VG+LGE+ SFG+GGTGKFS Sbjct: 251 GCKIISTQPVDMEDTPPDQQHVCRLGISRGDDAVGNLGETEHSFGFGGTGKFSVAGKFSN 310
Query: 83 XXXXXXXXDIIMCAVDLDNPSKAKVSF 3 D I+CAV+L+ A +SF Sbjct: 311 YGEKFGVGDTIVCAVNLETKPLASISF 337
>tr|B6KKR9|B6KKR9_TOXGO SPRY domain-containing protein OS=Toxoplasma gondii ME49 GN=TGME49_090270 PE=4 SV=1 Length = 704
Score = 44.7 bits (104), Expect = 0.002 Identities = 28/77 (36%), Positives = 41/77 (53%) Frame = -1
Query: 257 RVIENQQVIMEDTAKDQQNLCRVGLSRGDSDVGSLGESSTSFGYGGTGKFSHXXXXXXXX 78 +V+ V+M +T +N+CRVG+S + + LGESS S+GYGGT K S Sbjct: 113 KVVHAPTVVMPETPVHTRNVCRVGVSLPLTSL-FLGESSDSWGYGGTAKKSFSRKFENYG 171
Query: 77 XXXXXXDIIMCAVDLDN 27 D+I +DLD+ Sbjct: 172 ETYGVGDVIGTIIDLDD 188
>tr|A8NWC9|A8NWC9_BRUMA ATP-dependent helicase DDX1, putative OS=Brugia malayi GN=Bm1_11355 PE=4 SV=1 Length = 729
Score = 42.4 bits (98), Expect = 0.012 Identities = 29/76 (38%), Positives = 37/76 (48%) Frame = -1
Query: 254 VIENQQVIMEDTAKDQQNLCRVGLSRGDSDVGSLGESSTSFGYGGTGKFSHXXXXXXXXX 75 V+ + E T D LCR+G S ++ V LG + SFGYGGTGK S+ Sbjct: 124 VVGKGKYYYEGTVTDD-GLCRLGWSAANA-VLDLGTDNKSFGYGGTGKKSYNRQFDNYGT 181
Query: 74 XXXXXDIIMCAVDLDN 27 D I C +DLDN Sbjct: 182 SFTLSDTIGCMLDLDN 197
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