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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP920995
Clone id YMU001_000144_C12
Library
Length 350
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000144_C12.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
GGTACTCTGGAGGCTAAAGGGAAGGCAAAGGTAGAAGAGTCAGTTTGAGAGAAGCACAAA
GGAAAAGCAAAGGTAGAAGAAGTGGATGCTATGGGAGTGAAGCATGCCAGGCACGAGGAA
GCCTCTCAAAGAGAAGAGAAGATGAAAGGGAAGGCCGAGTCTAGCTAGCAAGCAAGCAGC
TAAACCGCGAGAGAAGATAGACATCGTGGATTTCTCACTAGGTGAGTATGCAAAACCCTA
TGACTTAGTTCAGGATGTGTTGATGCAGAGCCCGAAGATTTTCCAATTACTCCACCTTGC
ACCAAGAGTGAGGAGGCAATGGACGAAAATGGTCAGTACCAGGAAATCAA
■■Homology search results ■■ -
sp_hit_id Q42626
Definition sp|Q42626|OLNB3_BRANA Oleosin-B3 OS=Brassica napus
Align length 50
Score (bit) 30.8
E-value 2.2
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP920995|Adiantum capillus-veneris mRNA, clone:
YMU001_000144_C12.
         (350 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q42626|OLNB3_BRANA Oleosin-B3 OS=Brassica napus GN=OlnB3 PE=1...    31   2.2  
sp|P0C867|YB052_HUMAN Putative uncharacterized protein LOC100130...    30   3.7  
sp|P83212|HSP2_MURBR Sperm protamine P2 OS=Murex brandaris PE=1 ...    30   3.7  
sp|P83211|HSP1_MURBR Sperm protamine P1 OS=Murex brandaris PE=1 ...    29   6.3  

>sp|Q42626|OLNB3_BRANA Oleosin-B3 OS=Brassica napus GN=OlnB3 PE=1
           SV=1
          Length = 424

 Score = 30.8 bits (68), Expect = 2.2
 Identities = 19/50 (38%), Positives = 24/50 (48%)
 Frame = +1

Query: 10  EAKGKAKVEESV*EKHKGKAKVEEVDAMGVKHARHEEASQREEKMKGKAE 159
           E K K K E+S   K KGK+K E+      KH + E    + E   GK E
Sbjct: 170 EEKSKGKSEDS--SKGKGKSKGEDTTTDEDKHGKGESKHGKGESKHGKGE 217


>sp|P0C867|YB052_HUMAN Putative uncharacterized protein LOC100130201
           OS=Homo sapiens PE=5 SV=1
          Length = 120

 Score = 30.0 bits (66), Expect = 3.7
 Identities = 18/35 (51%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
 Frame = +3

Query: 27  KGRRVS-LREAQRKSKGRRSGCYGSEACQARGSLS 128
           +GRR S L   QR SKGRR    G +A +ARG+ S
Sbjct: 43  QGRRDSRLHAGQRNSKGRRIAEAGGKAARARGTQS 77


>sp|P83212|HSP2_MURBR Sperm protamine P2 OS=Murex brandaris PE=1
           SV=1
          Length = 58

 Score = 30.0 bits (66), Expect = 3.7
 Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
 Frame = +3

Query: 18  REGKGRRVSLR-EAQRKSKGRRSGCYGSEACQARGSLSKRREDER 149
           R GKGR    + + +++ KGRR G  G +  + +G   KRR   R
Sbjct: 5   RRGKGRGKKRKGKGKKRGKGRRRGSKGRKKKKGKGKKRKRRRRRR 49


>sp|P83211|HSP1_MURBR Sperm protamine P1 OS=Murex brandaris PE=1
           SV=1
          Length = 107

 Score = 29.3 bits (64), Expect = 6.3
 Identities = 14/46 (30%), Positives = 24/46 (52%)
 Frame = +3

Query: 21  EGKGRRVSLREAQRKSKGRRSGCYGSEACQARGSLSKRREDEREGR 158
           +GKG+R   R+ + K KG++ G      C+      KR+  + +GR
Sbjct: 53  KGKGKRRRRRKGKGKGKGKKKGKGRRRRCRRGRGCKKRKGKKGKGR 98
tr_hit_id Q5QM32
Definition tr|Q5QM32|Q5QM32_ORYSJ Epstein-Barr virus EBNA-1-like protein OS=Oryza sativa subsp. japonica
Align length 53
Score (bit) 34.3
E-value 3.2
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP920995|Adiantum capillus-veneris mRNA, clone:
YMU001_000144_C12.
         (350 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q5QM32|Q5QM32_ORYSJ Epstein-Barr virus EBNA-1-like protein OS...    34   3.2  
tr|Q1ENX6|Q1ENX6_MUSAC Putative uncharacterized protein OS=Musa ...    34   4.1  
tr|B8A599|B8A599_DANRE Novel protein OS=Danio rerio GN=DKEY-33C1...    33   5.4  
tr|A2R7V8|A2R7V8_ASPNC Remark: blastp matches are not significan...    33   5.4  
tr|O73931|O73931_SALSA U2 snRNP-specific A' protein OS=Salmo sal...    33   7.0  
tr|Q6L589|Q6L589_ORYSJ Putative uncharacterized protein OJ1393_A...    33   9.2  
tr|Q2RBF5|Q2RBF5_ORYSJ Expressed protein OS=Oryza sativa subsp. ...    33   9.2  
tr|Q2QYN0|Q2QYN0_ORYSJ Os12g0112600 protein OS=Oryza sativa subs...    33   9.2  
tr|Q0IV48|Q0IV48_ORYSJ Os11g0113200 protein OS=Oryza sativa subs...    33   9.2  
tr|Q0DIR8|Q0DIR8_ORYSJ Os05g0368000 protein OS=Oryza sativa subs...    33   9.2  
tr|B8BP09|B8BP09_ORYSI Putative uncharacterized protein OS=Oryza...    33   9.2  
tr|B8BIQ1|B8BIQ1_ORYSI Putative uncharacterized protein OS=Oryza...    33   9.2  
tr|A3C7X8|A3C7X8_ORYSJ Putative uncharacterized protein OS=Oryza...    33   9.2  

>tr|Q5QM32|Q5QM32_ORYSJ Epstein-Barr virus EBNA-1-like protein
           OS=Oryza sativa subsp. japonica GN=OJ1117_G01.20 PE=4
           SV=1
          Length = 185

 Score = 34.3 bits (77), Expect = 3.2
 Identities = 21/53 (39%), Positives = 30/53 (56%), Gaps = 5/53 (9%)
 Frame = +3

Query: 12  G*REGKGRRVSLREAQRKSKGRRSGCYGSEACQAR-----GSLSKRREDEREG 155
           G  EGKGR  S R ++ +++G R+G  G+E    R     G  ++ RE EREG
Sbjct: 125 GQSEGKGRGRSARRSRTRARGARAGRSGAEGEGERERAGGGEGAREREREREG 177


>tr|Q1ENX6|Q1ENX6_MUSAC Putative uncharacterized protein OS=Musa
           acuminata GN=MA4_111B14.32 PE=4 SV=1
          Length = 170

 Score = 33.9 bits (76), Expect = 4.1
 Identities = 21/53 (39%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
 Frame = +3

Query: 6   SGG*REGKGRRVSLREAQRKSKGRRSGCY--GSEACQARGSLSKRREDEREGR 158
           SGG      RR   RE +R+ K R +G    G+ + +ARG   +RRE  RE R
Sbjct: 27  SGGSSSSGERRQRQRERERERKARAAGGLEGGASSGKARGRARRRREGSREAR 79


>tr|B8A599|B8A599_DANRE Novel protein OS=Danio rerio
           GN=DKEY-33C12.4-001 PE=4 SV=1
          Length = 631

 Score = 33.5 bits (75), Expect = 5.4
 Identities = 31/114 (27%), Positives = 47/114 (41%), Gaps = 2/114 (1%)
 Frame = +1

Query: 10  EAKGKAKVEESV*EKHKGKAKVEEVDAMGVKHARHEEASQREE--KMKGKAEXXXXXXXX 183
           E   K  V+E   EK K KA+ +++  M  K  R  E  ++E   K K K          
Sbjct: 112 ERNAKELVDEE--EKIKKKAEKKKMKKMRQKERRRLEKLEKENANKEKNKPVQVDPGPEK 169

Query: 184 TAREDRHRGFLTR*VCKTL*LSSGCVDAEPEDFPITPPCTKSEEAMDENGQYQE 345
           T   D+      +  CK    + GC    P+  PI+ P + S+ + DE    +E
Sbjct: 170 TKHADKDNENKDK-KCK----NKGCSSVPPDPQPISAPVSSSDSSSDEEDDKKE 218


>tr|A2R7V8|A2R7V8_ASPNC Remark: blastp matches are not significant
           OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513)
           GN=An16g04920 PE=4 SV=1
          Length = 348

 Score = 33.5 bits (75), Expect = 5.4
 Identities = 19/45 (42%), Positives = 24/45 (53%)
 Frame = +3

Query: 63  KSKGRRSGCYGSEACQARGSLSKRREDEREGRV*LASKQLNRERR 197
           +S    +G Y  E  +A    + RREDE E R  LA+KQ   ERR
Sbjct: 294 ESSDMEAGLYDVEEEEAAALAAARREDEEEWRAELAAKQQKLERR 338


>tr|O73931|O73931_SALSA U2 snRNP-specific A' protein OS=Salmo salar
           GN=U2A' PE=2 SV=2
          Length = 339

 Score = 33.1 bits (74), Expect = 7.0
 Identities = 20/56 (35%), Positives = 29/56 (51%), Gaps = 4/56 (7%)
 Frame = +1

Query: 4   TLEAKGKAKVEESV*EKH----KGKAKVEEVDAMGVKHARHEEASQREEKMKGKAE 159
           T E  G  ++EE V E      + + KVEEVD   V+    EE  + EE+ +GK +
Sbjct: 263 TEEGNGVEEMEEDVVEVQGKVEEVQGKVEEVDVKEVEEVEKEEVEEEEEREEGKEQ 318


>tr|Q6L589|Q6L589_ORYSJ Putative uncharacterized protein
           OJ1393_A07.9 OS=Oryza sativa subsp. japonica
           GN=OJ1393_A07.9 PE=4 SV=1
          Length = 183

 Score = 32.7 bits (73), Expect = 9.2
 Identities = 16/31 (51%), Positives = 18/31 (58%)
 Frame = +3

Query: 69  KGRRSGCYGSEACQARGSLSKRREDEREGRV 161
           K  R GC G +   A  SLS RRE+E EG V
Sbjct: 7   KAPRPGCGGDDGGAAAASLSARREEEEEGAV 37


>tr|Q2RBF5|Q2RBF5_ORYSJ Expressed protein OS=Oryza sativa subsp.
           japonica GN=LOC_Os11g02190 PE=4 SV=2
          Length = 779

 Score = 32.7 bits (73), Expect = 9.2
 Identities = 22/67 (32%), Positives = 30/67 (44%)
 Frame = +1

Query: 10  EAKGKAKVEESV*EKHKGKAKVEEVDAMGVKHARHEEASQREEKMKGKAEXXXXXXXXTA 189
           E +  AK EES  EK K KA+ + +  +  +    EE  QREE  K   E          
Sbjct: 199 EGENGAKAEESRVEKAKRKAEEKRLARLEKEMLEEEERKQREEMAKLVEERRRLRDEKAE 258

Query: 190 REDRHRG 210
            E+R +G
Sbjct: 259 AEERSKG 265


>tr|Q2QYN0|Q2QYN0_ORYSJ Os12g0112600 protein OS=Oryza sativa subsp.
           japonica GN=Os12g0112600 PE=4 SV=2
          Length = 806

 Score = 32.7 bits (73), Expect = 9.2
 Identities = 22/67 (32%), Positives = 30/67 (44%)
 Frame = +1

Query: 10  EAKGKAKVEESV*EKHKGKAKVEEVDAMGVKHARHEEASQREEKMKGKAEXXXXXXXXTA 189
           E +  AK EES  EK K KA+ + +  +  +    EE  QREE  K   E          
Sbjct: 215 EGENGAKAEESRVEKAKRKAEEKRLARLEKEMLEEEERKQREEMAKLVEERRRLRDEKAE 274

Query: 190 REDRHRG 210
            E+R +G
Sbjct: 275 AEERSKG 281


>tr|Q0IV48|Q0IV48_ORYSJ Os11g0113200 protein OS=Oryza sativa subsp.
           japonica GN=Os11g0113200 PE=4 SV=1
          Length = 734

 Score = 32.7 bits (73), Expect = 9.2
 Identities = 22/67 (32%), Positives = 30/67 (44%)
 Frame = +1

Query: 10  EAKGKAKVEESV*EKHKGKAKVEEVDAMGVKHARHEEASQREEKMKGKAEXXXXXXXXTA 189
           E +  AK EES  EK K KA+ + +  +  +    EE  QREE  K   E          
Sbjct: 199 EGENGAKAEESRVEKAKRKAEEKRLARLEKEMLEEEERKQREEMAKLVEERRRLRDEKAE 258

Query: 190 REDRHRG 210
            E+R +G
Sbjct: 259 AEERSKG 265


>tr|Q0DIR8|Q0DIR8_ORYSJ Os05g0368000 protein OS=Oryza sativa subsp.
           japonica GN=Os05g0368000 PE=4 SV=1
          Length = 265

 Score = 32.7 bits (73), Expect = 9.2
 Identities = 16/31 (51%), Positives = 18/31 (58%)
 Frame = +3

Query: 69  KGRRSGCYGSEACQARGSLSKRREDEREGRV 161
           K  R GC G +   A  SLS RRE+E EG V
Sbjct: 7   KAPRPGCGGDDGGAAAASLSARREEEEEGAV 37