BP921000 |
Clone id |
YMU001_000144_D05 |
Library |
YMU01 |
Length |
407 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000144_D05. |
Accession |
BP921000 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
GGGCTTGTTCTAAAAATCCTAAACCCTACGATGGAAAACCATAGAGTCCTTTGATCTCAA AGGTTCCAGATAGCTTTCATGCTTCCTAATACTGAAATGCAGAACTGACATCTTTGATTC ATGTTGAAGCAGCCCACAAACTATTAGAGGCATCTGAGTGTAGGTACTCAAAAGTTTTAA GGCTGAAATAGCAGAGAGATCTTTGACATGAAGCCTCGCATAAGCTCCCAAGGGTACCGA ACCGTTAAACAGTCCCTCATCTACTCCAGCAGCTTTGGCAAAGACACTTTTCCGAGTCCT TTGAAAACTCTCGAAGGAGAATATTTTGCCGTATTGTAGCGGCAATGACTCCTTCGGATC CCAAGCGGACGTGCGAAGAGACTTAAGTCCTCTATATTTGGCAAACC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q5XGY1 |
Definition |
sp|Q5XGY1|TSR1_XENLA Pre-rRNA-processing protein TSR1 homolog OS=Xenopus laevis |
Align length |
125 |
Score (bit) |
106.0 |
E-value |
4.0e-23 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A7QPB4 |
Definition |
tr|A7QPB4|A7QPB4_VITVI Chromosome chr18 scaffold_137, whole genome shotgun sequence OS=Vitis vinifera |
Align length |
125 |
Score (bit) |
155.0 |
E-value |
1.0e-36 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP921000|Adiantum capillus-veneris mRNA, clone: YMU001_000144_D05. (407 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A7QPB4|A7QPB4_VITVI Chromosome chr18 scaffold_137, whole geno... 155 1e-36 tr|A9RV00|A9RV00_PHYPA Predicted protein OS=Physcomitrella paten... 154 2e-36 tr|Q53MQ7|Q53MQ7_ORYSJ LOC495115 protein, putative, expressed OS... 148 1e-34 tr|Q53MJ1|Q53MJ1_ORYSJ Putative uncharacterized protein (Fragmen... 148 1e-34 tr|B8BK56|B8BK56_ORYSI Putative uncharacterized protein OS=Oryza... 148 1e-34 tr|A3CAN5|A3CAN5_ORYSJ Putative uncharacterized protein OS=Oryza... 148 1e-34 tr|Q9SHN6|Q9SHN6_ARATH F7F22.4 OS=Arabidopsis thaliana PE=4 SV=1 134 3e-30 tr|Q9ASU6|Q9ASU6_ARATH At1g42440/F7F22_7 (Putative uncharacteriz... 134 3e-30 tr|Q4RRR0|Q4RRR0_TETNG Chromosome 16 SCAF15002, whole genome sho... 113 5e-24 tr|B6P5W4|B6P5W4_BRAFL Putative uncharacterized protein OS=Branc... 112 7e-24 tr|B6L5M6|B6L5M6_BRAFL Putative uncharacterized protein OS=Branc... 112 7e-24 tr|A7SGF5|A7SGF5_NEMVE Predicted protein OS=Nematostella vectens... 107 4e-22 tr|B1WBH9|B1WBH9_XENTR Tsr1 protein (Fragment) OS=Xenopus tropic... 106 7e-22 tr|B7Q452|B7Q452_IXOSC Ribosome biogenesis protein tsr1, putativ... 105 1e-21 tr|A6QQN4|A6QQN4_BOVIN TSR1 protein OS=Bos taurus GN=TSR1 PE=2 SV=1 100 6e-20 tr|B0W236|B0W236_CULQU Ribosome biogenesis protein TSR1 OS=Culex... 96 9e-19 tr|Q4P4H7|Q4P4H7_USTMA Putative uncharacterized protein OS=Ustil... 95 2e-18 tr|A4RX61|A4RX61_OSTLU Predicted protein OS=Ostreococcus lucimar... 93 6e-18 tr|Q0IFN5|Q0IFN5_AEDAE Ribosome biogenesis protein tsr1 (20S rrn... 93 6e-18 tr|Q5KGV7|Q5KGV7_CRYNE Ribosome biogenesis and assembly-related ... 93 8e-18 tr|Q55SG4|Q55SG4_CRYNE Putative uncharacterized protein OS=Crypt... 93 8e-18 tr|Q019R1|Q019R1_OSTTA [S] KOG1980 Uncharacterized conserved pro... 88 2e-16 tr|A8Q476|A8Q476_MALGO Putative uncharacterized protein OS=Malas... 88 2e-16 tr|B4KWV0|B4KWV0_DROMO GI12015 OS=Drosophila mojavensis GN=GI120... 88 2e-16 tr|A8N772|A8N772_COPC7 Putative uncharacterized protein OS=Copri... 88 2e-16 tr|Q7PTN1|Q7PTN1_ANOGA AGAP009438-PA OS=Anopheles gambiae GN=AGA... 86 9e-16 tr|A8NVM7|A8NVM7_BRUMA Protein F10G7.1, putative OS=Brugia malay... 86 1e-15 tr|Q2LYP0|Q2LYP0_DROPS GA20274 OS=Drosophila pseudoobscura pseud... 85 2e-15 tr|B4H605|B4H605_DROPE GL24682 OS=Drosophila persimilis GN=GL246... 85 2e-15 tr|A9UTR2|A9UTR2_MONBE Predicted protein OS=Monosiga brevicollis... 85 2e-15
>tr|A7QPB4|A7QPB4_VITVI Chromosome chr18 scaffold_137, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00002877001 PE=4 SV=1 Length = 801
Score = 155 bits (392), Expect = 1e-36 Identities = 71/125 (56%), Positives = 95/125 (76%) Frame = -3
Query: 405 FAKYRGLKSLRTSAWDPKESLPLQYGKIFSFESFQRTRKSVFAKAAGVDEGLFNGSVPLG 226 FAKYRGLKS RTS+WDPKESLP +Y +IFSF++F RT+K V AKA +++G + +P G Sbjct: 504 FAKYRGLKSFRTSSWDPKESLPPEYARIFSFDNFARTQKHVLAKALDMEQGYMDDCLPAG 563
Query: 225 AYARLHVKDLSAISALKLLSTYTQMPLIVCGLLQHESKMSVLHFSIRKHESYLEPLRSKD 46 Y RLH++++ A KL +MP+I CGLLQHE KMSVLHFSI+KH++Y P++SK+ Sbjct: 564 TYIRLHIREVPVSVASKLCMLGKRMPVIACGLLQHECKMSVLHFSIKKHDAYDAPIKSKE 623
Query: 45 SMVFH 31 +VFH Sbjct: 624 ELVFH 628
>tr|A9RV00|A9RV00_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_119852 PE=4 SV=1 Length = 778
Score = 154 bits (389), Expect = 2e-36 Identities = 75/125 (60%), Positives = 91/125 (72%) Frame = -3
Query: 405 FAKYRGLKSLRTSAWDPKESLPLQYGKIFSFESFQRTRKSVFAKAAGVDEGLFNGSVPLG 226 FAKYRGLKSLRTS WDPKESLP +Y KIF F++F RT+K+V AKA +D G G Sbjct: 490 FAKYRGLKSLRTSPWDPKESLPFEYAKIFDFDNFVRTQKTVLAKAKELDSCTQEGCFAAG 549
Query: 225 AYARLHVKDLSAISALKLLSTYTQMPLIVCGLLQHESKMSVLHFSIRKHESYLEPLRSKD 46 Y RLHV + A A LL +Y P++VCGLLQHESKMSVLH+SIRK E Y +P++SK+ Sbjct: 550 CYVRLHVLKVPASKAELLLKSYKTNPVVVCGLLQHESKMSVLHYSIRKSEGYTDPIKSKE 609
Query: 45 SMVFH 31 +VFH Sbjct: 610 LLVFH 614
>tr|Q53MQ7|Q53MQ7_ORYSJ LOC495115 protein, putative, expressed OS=Oryza sativa subsp. japonica GN=Os11g0298400 PE=2 SV=1 Length = 785
Score = 148 bits (374), Expect = 1e-34 Identities = 70/125 (56%), Positives = 94/125 (75%) Frame = -3
Query: 405 FAKYRGLKSLRTSAWDPKESLPLQYGKIFSFESFQRTRKSVFAKAAGVDEGLFNGSVPLG 226 FAKYRGLKS RTS+WDPKESLP Y +IF+F++F RT+K V AK A DEG G Sbjct: 493 FAKYRGLKSFRTSSWDPKESLPQDYARIFAFDNFTRTQKHVLAKMAERDEGTLKDCAQRG 552
Query: 225 AYARLHVKDLSAISALKLLSTYTQMPLIVCGLLQHESKMSVLHFSIRKHESYLEPLRSKD 46 ++ RLH+K++ A KL+ ++P++V GLLQHESK+SVLHFSI+KH+SY P++SKD Sbjct: 553 SFVRLHLKNVPTEIASKLVHPSRRLPVVVSGLLQHESKISVLHFSIKKHDSYEAPIKSKD 612
Query: 45 SMVFH 31 S++F+ Sbjct: 613 SLIFN 617
>tr|Q53MJ1|Q53MJ1_ORYSJ Putative uncharacterized protein (Fragment) OS=Oryza sativa subsp. japonica PE=4 SV=1 Length = 335
Score = 148 bits (374), Expect = 1e-34 Identities = 70/125 (56%), Positives = 94/125 (75%) Frame = -3
Query: 405 FAKYRGLKSLRTSAWDPKESLPLQYGKIFSFESFQRTRKSVFAKAAGVDEGLFNGSVPLG 226 FAKYRGLKS RTS+WDPKESLP Y +IF+F++F RT+K V AK A DEG G Sbjct: 43 FAKYRGLKSFRTSSWDPKESLPQDYARIFAFDNFTRTQKHVLAKMAERDEGTLKDCAQRG 102
Query: 225 AYARLHVKDLSAISALKLLSTYTQMPLIVCGLLQHESKMSVLHFSIRKHESYLEPLRSKD 46 ++ RLH+K++ A KL+ ++P++V GLLQHESK+SVLHFSI+KH+SY P++SKD Sbjct: 103 SFVRLHLKNVPTEIASKLVHPSRRLPVVVSGLLQHESKISVLHFSIKKHDSYEAPIKSKD 162
Query: 45 SMVFH 31 S++F+ Sbjct: 163 SLIFN 167
>tr|B8BK56|B8BK56_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_35872 PE=4 SV=1 Length = 782
Score = 148 bits (374), Expect = 1e-34 Identities = 70/125 (56%), Positives = 94/125 (75%) Frame = -3
Query: 405 FAKYRGLKSLRTSAWDPKESLPLQYGKIFSFESFQRTRKSVFAKAAGVDEGLFNGSVPLG 226 FAKYRGLKS RTS+WDPKESLP Y +IF+F++F RT+K V AK A DEG G Sbjct: 490 FAKYRGLKSFRTSSWDPKESLPQDYARIFAFDNFTRTQKHVLAKMAERDEGTLKDCAQRG 549
Query: 225 AYARLHVKDLSAISALKLLSTYTQMPLIVCGLLQHESKMSVLHFSIRKHESYLEPLRSKD 46 ++ RLH+K++ A KL+ ++P++V GLLQHESK+SVLHFSI+KH+SY P++SKD Sbjct: 550 SFVRLHLKNVPTEIASKLVHPSRRLPVVVSGLLQHESKISVLHFSIKKHDSYEAPIKSKD 609
Query: 45 SMVFH 31 S++F+ Sbjct: 610 SLIFN 614
>tr|A3CAN5|A3CAN5_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_032357 PE=4 SV=1 Length = 760
Score = 148 bits (374), Expect = 1e-34 Identities = 70/125 (56%), Positives = 94/125 (75%) Frame = -3
Query: 405 FAKYRGLKSLRTSAWDPKESLPLQYGKIFSFESFQRTRKSVFAKAAGVDEGLFNGSVPLG 226 FAKYRGLKS RTS+WDPKESLP Y +IF+F++F RT+K V AK A DEG G Sbjct: 463 FAKYRGLKSFRTSSWDPKESLPQDYARIFAFDNFTRTQKHVLAKMAERDEGTLKDCAQRG 522
Query: 225 AYARLHVKDLSAISALKLLSTYTQMPLIVCGLLQHESKMSVLHFSIRKHESYLEPLRSKD 46 ++ RLH+K++ A KL+ ++P++V GLLQHESK+SVLHFSI+KH+SY P++SKD Sbjct: 523 SFVRLHLKNVPTEIASKLVHPSRRLPVVVSGLLQHESKISVLHFSIKKHDSYEAPIKSKD 582
Query: 45 SMVFH 31 S++F+ Sbjct: 583 SLIFN 587
>tr|Q9SHN6|Q9SHN6_ARATH F7F22.4 OS=Arabidopsis thaliana PE=4 SV=1 Length = 813
Score = 134 bits (336), Expect = 3e-30 Identities = 65/126 (51%), Positives = 92/126 (73%), Gaps = 1/126 (0%) Frame = -3
Query: 405 FAKYRGLKSLRTSAWDPKESLPLQYGKIFSFESFQRTRKSVFAKAAGVDEGLFNGSVPLG 226 FAKYRGLKS RTS+WDP ESLP Y +IF+F++ RT+K V +A ++E + VP+G Sbjct: 471 FAKYRGLKSFRTSSWDPNESLPQDYARIFAFDNVARTQKLVLKQALKMEEEDRDDCVPIG 530
Query: 225 AYARLHVKDLSAISALKLLS-TYTQMPLIVCGLLQHESKMSVLHFSIRKHESYLEPLRSK 49 +Y RLH+K++ +A KL S T P+I GLLQHESKMSVLHFS++K++ Y P+++K Sbjct: 531 SYVRLHIKEVPLGAASKLSSLVNTTKPIIGFGLLQHESKMSVLHFSVKKYDGYEAPIKTK 590
Query: 48 DSMVFH 31 + ++FH Sbjct: 591 EELMFH 596
>tr|Q9ASU6|Q9ASU6_ARATH At1g42440/F7F22_7 (Putative uncharacterized protein At1g42440) OS=Arabidopsis thaliana GN=At1g42440 PE=2 SV=1 Length = 793
Score = 134 bits (336), Expect = 3e-30 Identities = 65/126 (51%), Positives = 92/126 (73%), Gaps = 1/126 (0%) Frame = -3
Query: 405 FAKYRGLKSLRTSAWDPKESLPLQYGKIFSFESFQRTRKSVFAKAAGVDEGLFNGSVPLG 226 FAKYRGLKS RTS+WDP ESLP Y +IF+F++ RT+K V +A ++E + VP+G Sbjct: 497 FAKYRGLKSFRTSSWDPNESLPQDYARIFAFDNVARTQKLVLKQALKMEEEDRDDCVPIG 556
Query: 225 AYARLHVKDLSAISALKLLS-TYTQMPLIVCGLLQHESKMSVLHFSIRKHESYLEPLRSK 49 +Y RLH+K++ +A KL S T P+I GLLQHESKMSVLHFS++K++ Y P+++K Sbjct: 557 SYVRLHIKEVPLGAASKLSSLVNTTKPIIGFGLLQHESKMSVLHFSVKKYDGYEAPIKTK 616
Query: 48 DSMVFH 31 + ++FH Sbjct: 617 EELMFH 622
>tr|Q4RRR0|Q4RRR0_TETNG Chromosome 16 SCAF15002, whole genome shotgun sequence. (Fragment) OS=Tetraodon nigroviridis GN=GSTENG00030055001 PE=4 SV=1 Length = 798
Score = 113 bits (282), Expect = 5e-24 Identities = 56/125 (44%), Positives = 79/125 (63%) Frame = -3
Query: 405 FAKYRGLKSLRTSAWDPKESLPLQYGKIFSFESFQRTRKSVFAKAAGVDEGLFNGSVPLG 226 F +YRGLKS RTS WDP E+LP Y +IF F++F+RTR+ + A+AA +EG +G Sbjct: 505 FQRYRGLKSFRTSPWDPMENLPQNYSRIFQFQNFERTRRRILAEAAAEEEGAM-----VG 559
Query: 225 AYARLHVKDLSAISALKLLSTYTQMPLIVCGLLQHESKMSVLHFSIRKHESYLEPLRSKD 46 Y LH+ D + + + S PL + LL HE KMSV+H +R+H S EP++SK+ Sbjct: 560 WYVTLHIID---VPSSVMDSVQAGRPLTLVSLLPHEQKMSVMHVLVRRHPSNTEPIKSKE 616
Query: 45 SMVFH 31 +VFH Sbjct: 617 ELVFH 621
>tr|B6P5W4|B6P5W4_BRAFL Putative uncharacterized protein OS=Branchiostoma floridae GN=BRAFLDRAFT_243483 PE=4 SV=1 Length = 804
Score = 112 bits (281), Expect = 7e-24 Identities = 59/126 (46%), Positives = 81/126 (64%), Gaps = 1/126 (0%) Frame = -3
Query: 405 FAKYRGLKSLRTSAWDPKESLPLQYGKIFSFESFQRTRKSVFAKAAGVDEGLFNGSVPLG 226 F KYRGLKS RTS WDPKE+LPL + +IF FESF+RT K V D + ++P G Sbjct: 501 FQKYRGLKSFRTSPWDPKENLPLDFARIFQFESFKRTAKRVLT----ADRDDTDAAMP-G 555
Query: 225 AYARLHVKDLSAISALKLLSTYT-QMPLIVCGLLQHESKMSVLHFSIRKHESYLEPLRSK 49 Y +HV ++ + +Y+ PL+V GLLQHE KMSV+HF +++H EP++SK Sbjct: 556 WYITIHVANVPK----TFIESYSPSHPLVVYGLLQHEQKMSVVHFLVKRHSGNTEPIKSK 611
Query: 48 DSMVFH 31 + M+FH Sbjct: 612 ERMIFH 617
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