| BP921002 |
| Clone id |
YMU001_000144_D07 |
| Library |
YMU01 |
| Length |
509 |
| Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000144_D07. |
| Accession |
BP921002 |
| Tissue type |
prothallium |
| Developmental stage |
- |
| Contig ID |
- |
| Sequence |
GTCTTGCATATTTCGCTGTAACTATTCAGTATTAGCAAGCCTGTGAGCAGGTTGGGCTCC AGCCTCTGCGTGATTTTCCTCCTTTTGGCCATCATTACTTTGCACAGGGACCGCTTTTCC ATACTCATTAAGTCTTGAGCCTTCCATTCTTTCTCCTTGGCGATAGTGACTGCTTCCTCA AAGGTGGCAGGCCTTTTCAACTCAATTTTGAACTTCAGGCTTTCTTTTAAGTTTGCCACA AAACGGTCCTTCTTCAACATGGATGGAGGGATTTCATTTCCCAAAGCTCGGGCCCATTTA TCCCATAAACGGGTGAACTGCATGACAAAATCATCAACACCTTGATTAACCTTTTGAGTG TACCCCAAAATTTCATGCCAAACTTCATCAGGCACTTCAATGGACGTGTACTGTGCCAAG AAAGCTTGCTTCACACGATTGTAGTCCTGGAGTTTGTGCATGTACCAACTCTTCATGATT GTGTAACCAAACTTTTGCCTCATCCAGTT |
| ■■Homology search results ■■ |
- |
| Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
| sp_hit_id |
Q8CI11 |
| Definition |
sp|Q8CI11|GNL3_MOUSE Guanine nucleotide-binding protein-like 3 OS=Mus musculus |
| Align length |
54 |
| Score (bit) |
33.5 |
| E-value |
0.59 |
| Report |
 |
| TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
| tr_hit_id |
A1YGR8 |
| Definition |
tr|A1YGR8|A1YGR8_9BILA Putative gag protein OS=Philodina roseola |
| Align length |
99 |
| Score (bit) |
39.3 |
| E-value |
0.11 |
| Report |
 BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP921002|Adiantum capillus-veneris mRNA, clone: YMU001_000144_D07. (509 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A1YGR8|A1YGR8_9BILA Putative gag protein OS=Philodina roseola... 39 0.11 tr|B4AFI0|B4AFI0_BACPU DNA repair exonuclease subunit C OS=Bacil... 39 0.19 tr|B3GXI8|B3GXI8_ACTP7 DNA replication inhibitor protein OS=Acti... 37 0.42 tr|A3N0B4|A3N0B4_ACTP2 DNA replication inhibitor protein OS=Acti... 37 0.42 tr|B0BP31|B0BP31_ACTPJ DNA replication inhibitor protein OS=Acti... 37 0.72 tr|B3T257|B3T257_9ZZZZ Putative histidine kinase-, DNA gyrase B-... 35 2.7 tr|A1B7L2|A1B7L2_PARDP Transcriptional regulator, GntR family OS... 35 2.7 tr|Q7XSX7|Q7XSX7_ORYSJ OSJNBb0056F09.19 protein OS=Oryza sativa ... 35 2.7 tr|Q0JEH4|Q0JEH4_ORYSJ Os04g0273100 protein (Fragment) OS=Oryza ... 35 2.7 tr|A3ARU3|A3ARU3_ORYSJ Putative uncharacterized protein OS=Oryza... 35 2.7 tr|Q03I64|Q03I64_STRTD Predicted transcriptional regulator OS=St... 34 3.6 tr|Q9X9M7|Q9X9M7_STRTR Putative transposon protein OS=Streptococ... 34 3.6 tr|Q6W4X0|Q6W4X0_STRTR Putative uncharacterized protein OS=Strep... 34 3.6 tr|B0F820|B0F820_CUCME Putative uncharacterized protein OS=Cucum... 34 3.6 tr|A0CB40|A0CB40_PARTE Chromosome undetermined scaffold_163, who... 34 4.7 tr|Q9LJS7|Q9LJS7_ARATH Copia-like retroelement pol polyprotein-l... 33 6.1 tr|Q84KB1|Q84KB1_CUCME Gag-protease polyprotein OS=Cucumis melo ... 33 6.1 tr|B6AJG3|B6AJG3_9CRYT Putative uncharacterized protein OS=Crypt... 33 6.1 tr|Q3TK27|Q3TK27_MOUSE Putative uncharacterized protein OS=Mus m... 33 8.0 tr|B3JV31|B3JV31_9DELT Histidinol dehydrogenase OS=Geobacter sp.... 33 8.0 tr|B8ARL3|B8ARL3_ORYSI Putative uncharacterized protein OS=Oryza... 33 8.0 tr|A5C7E6|A5C7E6_VITVI Putative uncharacterized protein OS=Vitis... 33 8.0 tr|B2WBA7|B2WBA7_PYRTR Ribosome biogenesis protein Pescadillo OS... 33 8.0 tr|B2W9Z8|B2W9Z8_PYRTR Ran GTP-binding protein OS=Pyrenophora tr... 33 8.0
>tr|A1YGR8|A1YGR8_9BILA Putative gag protein OS=Philodina roseola PE=4 SV=1 Length = 601
Score = 39.3 bits (90), Expect = 0.11 Identities = 29/99 (29%), Positives = 49/99 (49%), Gaps = 3/99 (3%) Frame = -1
Query: 434 VKQAFLAQYTSIEVPDEVWHEILGYTQKVNQGVDDFVMQFTRLWDKWARALGNEIPPSM- 258 VK+AFL+ + + + ++ YTQ VNQ V F + +L NE P M Sbjct: 329 VKEAFLSPFHD----ELAFKKLESYTQGVNQPVRSFYNEVLKLC--------NETDPDMS 376
Query: 257 --LKKDRFVANLKESLKFKIELKRPATFEEAVTIAKEKE 147 +K + K +L+++I K+P T ++ + AKE+E Sbjct: 377 EAMKLRHLLKKAKPTLQYEIRKKKPTTTKQFLEYAKEQE 415
>tr|B4AFI0|B4AFI0_BACPU DNA repair exonuclease subunit C OS=Bacillus pumilus ATCC 7061 GN=BAT_3070 PE=4 SV=1 Length = 1132
Score = 38.5 bits (88), Expect = 0.19 Identities = 27/84 (32%), Positives = 43/84 (51%), Gaps = 5/84 (5%) Frame = -1
Query: 293 ARALGNEIPPSMLKKDRFVANLKESLKFKIELKRPATFEEAVTIAKEKEWKAQDLMSMEK 114 AR E P +L+K + LKE IE K+ A F+E +I ++K KAQ L+ +K Sbjct: 334 ARQKKIETEPDLLQKKEQLIQLKE-----IERKKEAAFQEKTSIERQKNEKAQQLLQKKK 388
Query: 113 -----RSLCKVMMAKRRKITQRLE 57 +SL + + K+ ++ LE Sbjct: 389 EAENLQSLLERALTKQTQLKHELE 412
>tr|B3GXI8|B3GXI8_ACTP7 DNA replication inhibitor protein OS=Actinobacillus pleuropneumoniae serotype 7 (strain AP76) GN=seqA PE=4 SV=1 Length = 186
Score = 37.4 bits (85), Expect = 0.42 Identities = 27/105 (25%), Positives = 49/105 (46%) Frame = -1
Query: 404 SIEVPDEVWHEILGYTQKVNQGVDDFVMQFTRLWDKWARALGNEIPPSMLKKDRFVANLK 225 +IEV DE++H I TQ + + D + + R L + P +L + + LK Sbjct: 3 TIEVDDELYHYIASRTQAIGESASDILRRLLR--------LPSSPQPFVLVQQNTIDELK 54
Query: 224 ESLKFKIELKRPATFEEAVTIAKEKEWKAQDLMSMEKRSLCKVMM 90 E K K + K+ E+AV K ++ D+ E +++ + +M Sbjct: 55 ELAKPKAKAKKEDLIEKAV--QKVEKVLKSDVFINESKNVARFLM 97
>tr|A3N0B4|A3N0B4_ACTP2 DNA replication inhibitor protein OS=Actinobacillus pleuropneumoniae serotype 5b (strain L20) GN=seqA PE=4 SV=1 Length = 186
Score = 37.4 bits (85), Expect = 0.42 Identities = 27/105 (25%), Positives = 49/105 (46%) Frame = -1
Query: 404 SIEVPDEVWHEILGYTQKVNQGVDDFVMQFTRLWDKWARALGNEIPPSMLKKDRFVANLK 225 +IEV DE++H I TQ + + D + + R L + P +L + + LK Sbjct: 3 TIEVDDELYHYIASRTQAIGESASDILRRLLR--------LPSSPQPFVLVQQNTIDELK 54
Query: 224 ESLKFKIELKRPATFEEAVTIAKEKEWKAQDLMSMEKRSLCKVMM 90 E K K + K+ E+AV K ++ D+ E +++ + +M Sbjct: 55 ELAKPKAKAKKEDLIEKAV--QKVEKVLKSDVFINESKNVARFLM 97
>tr|B0BP31|B0BP31_ACTPJ DNA replication inhibitor protein OS=Actinobacillus pleuropneumoniae serotype 3 (strain JL03) GN=seqA PE=4 SV=1 Length = 186
Score = 36.6 bits (83), Expect = 0.72 Identities = 27/105 (25%), Positives = 48/105 (45%) Frame = -1
Query: 404 SIEVPDEVWHEILGYTQKVNQGVDDFVMQFTRLWDKWARALGNEIPPSMLKKDRFVANLK 225 +IEV DE++H I TQ + + D + + R L + P +L + LK Sbjct: 3 TIEVDDELYHYIASRTQAIGESASDILRRLLR--------LPSSPQPFVLVHQNTIDELK 54
Query: 224 ESLKFKIELKRPATFEEAVTIAKEKEWKAQDLMSMEKRSLCKVMM 90 E K K + K+ E+AV K ++ D+ E +++ + +M Sbjct: 55 ELAKPKAKAKKEDLIEKAV--QKVEKVLKSDVFINESKNVARFLM 97
>tr|B3T257|B3T257_9ZZZZ Putative histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OS=uncultured marine microorganism HF4000_137B17 GN=ALOHA_HF4000137B17ctg1g3 PE=4 SV=1 Length = 334
Score = 34.7 bits (78), Expect = 2.7 Identities = 25/84 (29%), Positives = 42/84 (50%) Frame = -1
Query: 425 AFLAQYTSIEVPDEVWHEILGYTQKVNQGVDDFVMQFTRLWDKWARALGNEIPPSMLKKD 246 AFL + SI + D+ + Y K N G+ +FV DK AL N+ ++ KK Sbjct: 203 AFLNKGLSIILVDKTAKKEKEYKNKHNGGIQEFV----EFLDKNKTALVNKNDVNLFKKP 258
Query: 245 RFVANLKESLKFKIELKRPATFEE 174 +++ LK+++ + LK A + E Sbjct: 259 IYISGLKDNVMVECSLKWNAGYSE 282
>tr|A1B7L2|A1B7L2_PARDP Transcriptional regulator, GntR family OS=Paracoccus denitrificans (strain Pd 1222) GN=Pden_3435 PE=4 SV=1 Length = 211
Score = 34.7 bits (78), Expect = 2.7 Identities = 28/92 (30%), Positives = 46/92 (50%), Gaps = 7/92 (7%) Frame = -1
Query: 488 GYTIMKSWYMHKLQDYNRVKQ----AFLAQYTSIEVPDE---VWHEILGYTQKVNQGVDD 330 G I++S + +L + +++Q A A+ + DE VW E+L Y + + G D+ Sbjct: 64 GALIVRSVTVEQLLEIVQLRQVLERAAAARAAERGITDELRQVWDEMLPYAEGRSVGFDE 123
Query: 329 FVMQFTRLWDKWARALGNEIPPSMLKKDRFVA 234 F R ARA G E+ P++L + R VA Sbjct: 124 FWQVDERFHAAVARAAGLELLPAILAEQRAVA 155
>tr|Q7XSX7|Q7XSX7_ORYSJ OSJNBb0056F09.19 protein OS=Oryza sativa subsp. japonica GN=OSJNBb0056F09.19 PE=4 SV=2 Length = 234
Score = 34.7 bits (78), Expect = 2.7 Identities = 15/53 (28%), Positives = 31/53 (58%), Gaps = 3/53 (5%) Frame = -1
Query: 287 ALGNEIPPSMLKKDR---FVANLKESLKFKIELKRPATFEEAVTIAKEKEWKA 138 AL + IP + + + F+A L++ + +EL++P ++A+ + + EWKA Sbjct: 124 ALTSRIPDPLTESQQVQLFIAGLQDDISIDVELQKPDDLQDAMRLPRAYEWKA 176
>tr|Q0JEH4|Q0JEH4_ORYSJ Os04g0273100 protein (Fragment) OS=Oryza sativa subsp. japonica GN=Os04g0273100 PE=4 SV=1 Length = 211
Score = 34.7 bits (78), Expect = 2.7 Identities = 15/53 (28%), Positives = 31/53 (58%), Gaps = 3/53 (5%) Frame = -1
Query: 287 ALGNEIPPSMLKKDR---FVANLKESLKFKIELKRPATFEEAVTIAKEKEWKA 138 AL + IP + + + F+A L++ + +EL++P ++A+ + + EWKA Sbjct: 101 ALTSRIPDPLTESQQVQLFIAGLQDDISIDVELQKPDDLQDAMRLPRAYEWKA 153
>tr|A3ARU3|A3ARU3_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_013515 PE=4 SV=1 Length = 234
Score = 34.7 bits (78), Expect = 2.7 Identities = 15/53 (28%), Positives = 31/53 (58%), Gaps = 3/53 (5%) Frame = -1
Query: 287 ALGNEIPPSMLKKDR---FVANLKESLKFKIELKRPATFEEAVTIAKEKEWKA 138 AL + IP + + + F+A L++ + +EL++P ++A+ + + EWKA Sbjct: 124 ALTSRIPDPLTESQQVQLFIAGLQDDISIDVELQKPDDLQDAMRLPRAYEWKA 176
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