BP921011
Clone id YMU001_000144_E05
Library
Length 554
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000144_E05.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
GAGTACCTGCGAGAGAGAGAGGTAAATAATCTTGCACATTGTTGGCCTCAAATCCTAGGC
CCCCAAGTGCAAATCACATTGTGTACTAAAGTACTTGATGTTTAATTATTTGTGTTAGAA
TGAAGGCCCATCTTTTTTAAGTAGTTATTTGTGTGCAGACAAGGGCATAACAATGTGCAC
GTAGATTGATTCCCAAGTTCCTCATTGAAATCATAACAAGCTACAACAAATTCAAGAGAA
TTGTAGCAAAGTTCCTTTTTTTCAAGAAAATCATGAATTTTCTTAACTATAGCAAATTTC
CTTCTTTTTGAGAAAATCACGAATTTTCTTAACTATAATTCAGTTAAGAAGCTCAATCTT
CCACAAATGGCCATGTCACATTGTTAGAAGGTAGCATTGATTAACAGGCACGACACCAAA
GTCAGGGATACTCAAGTTAAAGATGCCTCTGCAAGGGAAGGAGTTTCTTCAAGAATACAT
CAATGTTTTTTTTAATGACTTACATACTGGTTTACCATCTACATGGGATGTGCAACACAA
CATATATTATCTGC
■■Homology search results ■■ -
sp_hit_id Q6TND0
Definition sp|Q6TND0|MATK_DALWR Maturase K OS=Dalea wrightii
Align length 28
Score (bit) 30.8
E-value 4.6
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP921011|Adiantum capillus-veneris mRNA, clone:
YMU001_000144_E05.
(554 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q6TND0|MATK_DALWR Maturase K OS=Dalea wrightii GN=matK PE=3 SV=1 31 4.6
sp|Q6TND4|MATK_DALPU Maturase K OS=Dalea purpurea GN=matK PE=3 SV=1 31 4.6
sp|P15804|CAPP3_SORBI Phosphoenolpyruvate carboxylase 3 OS=Sorgh... 30 7.9

>sp|Q6TND0|MATK_DALWR Maturase K OS=Dalea wrightii GN=matK PE=3 SV=1
Length = 512

Score = 30.8 bits (68), Expect = 4.6
Identities = 14/28 (50%), Positives = 18/28 (64%)
Frame = +3

Query: 207 EIITSYNKFKRIVAKFLFFKKIMNFLNY 290
E+I SYNK + I A F FF+ +LNY
Sbjct: 122 EVIKSYNKLRSIHAIFPFFEDKFTYLNY 149


>sp|Q6TND4|MATK_DALPU Maturase K OS=Dalea purpurea GN=matK PE=3 SV=1
Length = 509

Score = 30.8 bits (68), Expect = 4.6
Identities = 14/28 (50%), Positives = 18/28 (64%)
Frame = +3

Query: 207 EIITSYNKFKRIVAKFLFFKKIMNFLNY 290
E+I SYNK + I A F FF+ +LNY
Sbjct: 119 EVIKSYNKLRSIHAIFPFFEDKFTYLNY 146


>sp|P15804|CAPP3_SORBI Phosphoenolpyruvate carboxylase 3 OS=Sorghum
bicolor PE=1 SV=2
Length = 960

Score = 30.0 bits (66), Expect = 7.9
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = -1

Query: 314 FSKRRKFAIVKKIHDFLEKKELCYNSL 234
FS+ + A+ KI +FLE ELCY SL
Sbjct: 388 FSEISEDAVFTKIEEFLEPLELCYKSL 414


tr_hit_id Q3LWD7
Definition tr|Q3LWD7|Q3LWD7_BIGNA Putative uncharacterized protein OS=Bigelowiella natans
Align length 95
Score (bit) 33.5
E-value 7.8
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP921011|Adiantum capillus-veneris mRNA, clone:
YMU001_000144_E05.
(554 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q3LWD7|Q3LWD7_BIGNA Putative uncharacterized protein OS=Bigel... 33 7.8

>tr|Q3LWD7|Q3LWD7_BIGNA Putative uncharacterized protein
OS=Bigelowiella natans PE=4 SV=1
Length = 500

Score = 33.5 bits (75), Expect = 7.8
Identities = 25/95 (26%), Positives = 50/95 (52%), Gaps = 4/95 (4%)
Frame = +1

Query: 169 NNVHVD*FPSSSLKS*QATTNSREL*QSSFFSRKS*IF----LTIANFLLFEKITNFLNY 336
N++ + F + +K + TN + + ++ FFS+ + I+ LLF+K +N +N+
Sbjct: 175 NSLKLIDFIINRIKYYKNKTNIKNIFRNVFFSKYKNWYSHNSFFISKGLLFQKYSNHINF 234

Query: 337 NSVKKLNLPQMAMSHC*KVALINRHDTKVRDTQVK 441
K N P + + +LIN+ D+K +D+ +K
Sbjct: 235 KRTSKSN-PSIIII---PTSLINKKDSKFKDSSIK 265