BP921012
Clone id YMU001_000144_E06
Library
Length 231
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000144_E06.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
CTCGCCGGCTCTCTAGTCTGCTCCCCCAAGTGGCTAATGCTTGTCGAATATCGCATAGCT
CTCCGGTGCATCCCCCGGCTTGCGTCATTACCTGCAGACAAAACTGCTAGCTCTTGGATC
AATGTCGACCTACTGTTGTACGTCCTTCTGCTGCTGCGCTCTGCTTCATCAATGCTGCTG
CTGGTGATCTGAAGCTTCTCAACGCCCTGACTGGCATTGGTGTGGAGGGTA
■■Homology search results ■■ -
sp_hit_id Q9BYQ7
Definition sp|Q9BYQ7|KRA41_HUMAN Keratin-associated protein 4-1 OS=Homo sapiens
Align length 41
Score (bit) 30.0
E-value 3.8
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP921012|Adiantum capillus-veneris mRNA, clone:
YMU001_000144_E06.
(231 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q9BYQ7|KRA41_HUMAN Keratin-associated protein 4-1 OS=Homo sap... 30 3.8
sp|Q95336|GON2_TUPGB Progonadoliberin-2 OS=Tupaia glis belangeri... 30 5.0

>sp|Q9BYQ7|KRA41_HUMAN Keratin-associated protein 4-1 OS=Homo
sapiens GN=KRTAP4-1 PE=2 SV=2
Length = 127

Score = 30.0 bits (66), Expect = 3.8
Identities = 12/41 (29%), Positives = 19/41 (46%)
Frame = +3

Query: 69 HPPACVITCRQNC*LLDQCRPTVVRPSAAALCFINAAAGDL 191
HP C TCR +C + CRP + + C +++ L
Sbjct: 66 HPVCCQTTCRPSCGVSSCCRPLCCQTTCRPSCGVSSCCRPL 106


>sp|Q95336|GON2_TUPGB Progonadoliberin-2 OS=Tupaia glis belangeri
GN=GNRH2 PE=1 SV=1
Length = 114

Score = 29.6 bits (65), Expect = 5.0
Identities = 15/34 (44%), Positives = 17/34 (50%)
Frame = -3

Query: 229 PSTPMPVRALRSFRSPAAALMKQSAAAEGRTTVG 128
P P + SFRS A A + S EGRTT G
Sbjct: 52 PPAPSAAQTAHSFRSAALASPEDSVPWEGRTTAG 85


tr_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP921012|Adiantum capillus-veneris mRNA, clone:
YMU001_000144_E06.
(231 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done

***** No hits found ******