BP921015
Clone id YMU001_000144_E09
Library
Length 543
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000144_E09.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
GAGATATTACCTGCAGGTACTCTGCAGTGAGTGCTGCAGAAATGTCGCTAGCAAGCTTTG
CAGAGTTGGTGATGCTGGCAGTGGCCATTGTTGCAAACGACGTCTCACATTTTGGTGCTC
TTGCCTGTCTGTCGACAACAGCAGTTGCTGTGGCTGCCTGTTTGTACTGGGTTTGGGTAA
CTAATGGAGCGACCANGGCTCCTTTTAAACAGGAGTACGTATAGCTCCCTGCCTCACTTA
CTCTTTCAGCTTAGACCACTTGTTGGAAATAGGCAACATGGTCGTATGGATCACTTGTAC
CATCAAATTTGTTGCACTACTTGTTATTTGCAAGCTGGCTACCTCTGAATGCGATTTGCT
GATTGATGAAGATTCTAATTTTGCCATGCGTCAATAAAATGGATGCCCTGCGCAACTGGC
CCACTGCTCCCAGAGAATATGCAACAGTCTAGTGATATTCAGCTCGCAGACCGAGCACAC
GGTTCCCTAAGGACAGGGAACTAAAAAACCTACAGTGGATTATTTTCACAAGGAGTAACA
TTC
■■Homology search results ■■ -
sp_hit_id Q54U64
Definition sp|Q54U64|Y1610_DICDI Putative uncharacterized protein DDB_G0281251 OS=Dictyostelium discoideum
Align length 49
Score (bit) 31.6
E-value 2.6
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP921015|Adiantum capillus-veneris mRNA, clone:
YMU001_000144_E09.
(543 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q54U64|Y1610_DICDI Putative uncharacterized protein DDB_G0281... 32 2.6
sp|Q701N2|KRA55_HUMAN Keratin-associated protein 5-5 OS=Homo sap... 31 4.5
sp|P51567|AFC2_ARATH Serine/threonine-protein kinase AFC2 OS=Ara... 30 7.6
sp|Q04638|ITT1_YEAST Translation termination inhibitor protein I... 30 7.6
sp|Q6C0U0|GMT_YARLI GDP-mannose transporter OS=Yarrowia lipolyti... 30 7.6
sp|O75690|KRA58_HUMAN Keratin-associated protein 5-8 OS=Homo sap... 30 9.9
sp|P47950|CYT4_NEUCR Mitochondrial protein cyt-4 OS=Neurospora c... 30 9.9
sp|O64474|AHM2_ARATH Putative cadmium/zinc-transporting ATPase 2... 30 9.9

>sp|Q54U64|Y1610_DICDI Putative uncharacterized protein DDB_G0281251
OS=Dictyostelium discoideum GN=DDB_G0281251 PE=4 SV=1
Length = 1529

Score = 31.6 bits (70), Expect = 2.6
Identities = 19/49 (38%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Frame = -1

Query: 159 RQPQQLLLSTDRQEHQNVRRRLQQWPLPASP-TLQSLLATFLQHSLQST 16
+Q QLL T +Q+ Q +++ QQ P+SP TL SLL ++L S+
Sbjct: 1433 QQQPQLLQQTQQQQQQQQQQQQQQVQTPSSPQTLASLLGNSSSNTLTSS 1481


>sp|Q701N2|KRA55_HUMAN Keratin-associated protein 5-5 OS=Homo
sapiens GN=KRTAP5-5 PE=2 SV=2
Length = 237

Score = 30.8 bits (68), Expect = 4.5
Identities = 15/43 (34%), Positives = 19/43 (44%), Gaps = 1/43 (2%)
Frame = +2

Query: 26 SECCRNVASK-LCRVGDAGSGHCCKRRLTFWCSCLSVDNSSCC 151
S CC++ K C +CC+ CSC S SSCC
Sbjct: 171 SSCCQSSCCKPYCCQSSCCKPYCCQSSCCKPCSCFSGCGSSCC 213


>sp|P51567|AFC2_ARATH Serine/threonine-protein kinase AFC2
OS=Arabidopsis thaliana GN=AFC2 PE=1 SV=1
Length = 427

Score = 30.0 bits (66), Expect = 7.6
Identities = 18/53 (33%), Positives = 24/53 (45%), Gaps = 11/53 (20%)
Frame = -1

Query: 153 PQQLLLSTDRQEHQNVRRRLQQWPLPAS-----------PTLQSLLATFLQHS 28
PQQ+L DR + VRR WP A+ P LQ+L+ + HS
Sbjct: 340 PQQMLKKVDRHSEKYVRRGRLDWPDGATSRDSLKAVLKLPRLQNLIMQHVDHS 392


>sp|Q04638|ITT1_YEAST Translation termination inhibitor protein ITT1
OS=Saccharomyces cerevisiae GN=ITT1 PE=1 SV=1
Length = 464

Score = 30.0 bits (66), Expect = 7.6
Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 3/50 (6%)
Frame = -2

Query: 191 RSISYPNPVQTGSHSN---CCCRQTGKSTKM*DVVCNNGHCQHHQLCKAC 51
+ IS +Q S SN C C + K +M + C N + +H+ LC+ C
Sbjct: 162 KQISEEATLQKVSRSNYHCCICMEMEKGVRMIKLPCENANVEHY-LCRGC 210


>sp|Q6C0U0|GMT_YARLI GDP-mannose transporter OS=Yarrowia lipolytica
GN=VRG4 PE=3 SV=1
Length = 326

Score = 30.0 bits (66), Expect = 7.6
Identities = 32/109 (29%), Positives = 48/109 (44%), Gaps = 2/109 (1%)
Frame = +3

Query: 30 SAAEMSLASFAELVMLAVAIVANDVSHFGALACLSTTAVAVAACLYWVWVTNGATXAPFK 209
S M+LASF +V+ +V +D+S A++ +TT V Y+ ++N A F
Sbjct: 124 SVTSMALASFVLMVLSSVIAAWSDISGAIAVSGSATTTVTALNIGYFWMMSNCFASAAFV 183

Query: 210 QEYV*LPASLTLSA*TTCWK*ATWSYGSL--VPSNLLHYLLFASWLPLN 350
Y+ L T T Y +L +P L+ LLF W P N
Sbjct: 184 L-YMRKRIKL-----TNFGDFDTTFYNNLLSIPVLLIASLLFEDWSPAN 226


>sp|O75690|KRA58_HUMAN Keratin-associated protein 5-8 OS=Homo
sapiens GN=KRTAP5-8 PE=2 SV=2
Length = 187

Score = 29.6 bits (65), Expect = 9.9
Identities = 16/42 (38%), Positives = 18/42 (42%)
Frame = +2

Query: 26 SECCRNVASKLCRVGDAGSGHCCKRRLTFWCSCLSVDNSSCC 151
S CC++ K C CCK CSC S SSCC
Sbjct: 102 SSCCQSSCCKPC----CSQSSCCKP-----CSCSSGCGSSCC 134


>sp|P47950|CYT4_NEUCR Mitochondrial protein cyt-4 OS=Neurospora
crassa GN=cyt-4 PE=3 SV=1
Length = 1117

Score = 29.6 bits (65), Expect = 9.9
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = +2

Query: 185 WSDXGSF*TGVRIAPCLTYSFSLDHLLEIGNMVVW 289
WS G R+ P TYS+S D L IG + +W
Sbjct: 435 WSSHGMLGPTTRVLPASTYSWSQDALTVIGVIHMW 469


>sp|O64474|AHM2_ARATH Putative cadmium/zinc-transporting ATPase 2
OS=Arabidopsis thaliana GN=HMA4 PE=2 SV=2
Length = 1172

Score = 29.6 bits (65), Expect = 9.9
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +2

Query: 14 QVLCSECCRNVASKLCRVGDAGSGHCCKRR 103
+V+ CC ++ VGD SGHC K++
Sbjct: 845 EVVAKSCCEKPKQQVESVGDCKSGHCEKKK 874


tr_hit_id A9TEN8
Definition tr|A9TEN8|A9TEN8_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens
Align length 53
Score (bit) 66.2
E-value 1.0e-09
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP921015|Adiantum capillus-veneris mRNA, clone:
YMU001_000144_E09.
(543 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A9TEN8|A9TEN8_PHYPA Predicted protein (Fragment) OS=Physcomit... 66 1e-09
tr|Q65XT5|Q65XT5_ORYSJ Putative uncharacterized protein P0033D06... 65 2e-09
tr|B8AXL9|B8AXL9_ORYSI Putative uncharacterized protein OS=Oryza... 65 2e-09
tr|A3AZM6|A3AZM6_ORYSJ Putative uncharacterized protein OS=Oryza... 65 2e-09
tr|A2Y023|A2Y023_ORYSI Putative uncharacterized protein OS=Oryza... 65 2e-09
tr|A9TF85|A9TF85_PHYPA Predicted protein (Fragment) OS=Physcomit... 64 5e-09
tr|A9TER8|A9TER8_PHYPA Predicted protein OS=Physcomitrella paten... 62 3e-08
tr|Q2QNK7|Q2QNK7_ORYSJ Os12g0562100 protein OS=Oryza sativa subs... 60 7e-08
tr|Q2QNK6|Q2QNK6_ORYSJ cDNA clone:J013042H16, full insert sequen... 60 7e-08
tr|B8BMI3|B8BMI3_ORYSI Putative uncharacterized protein OS=Oryza... 60 7e-08
tr|A3CIG2|A3CIG2_ORYSJ Putative uncharacterized protein OS=Oryza... 60 7e-08
tr|A7PRQ4|A7PRQ4_VITVI Chromosome chr14 scaffold_27, whole genom... 56 1e-06
tr|A5AS54|A5AS54_VITVI Putative uncharacterized protein OS=Vitis... 56 1e-06
tr|Q8W4E7|Q8W4E7_ARATH Putative uncharacterized protein At5g2682... 51 4e-05
tr|A8ISE1|A8ISE1_CHLRE Predicted protein OS=Chlamydomonas reinha... 36 1.5
tr|B8A3G2|B8A3G2_MAIZE Putative uncharacterized protein OS=Zea m... 35 3.3
tr|B6UAE5|B6UAE5_MAIZE Keratin-associated protein 5-4 OS=Zea may... 35 3.3
tr|A5GU40|A5GU40_SYNR3 Uncharacterized conserved membrane protei... 35 3.4
tr|A5ECC2|A5ECC2_BRASB Putative succinate-semialdehyde dehydroge... 34 5.8
tr|A5D5A5|A5D5A5_PELTS ABC-type transport system, involved in li... 33 9.7
tr|Q5KIZ2|Q5KIZ2_CRYNE Meiotic recombination-related protein, pu... 33 9.7

>tr|A9TEN8|A9TEN8_PHYPA Predicted protein (Fragment)
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_144496 PE=4 SV=1
Length = 495

Score = 66.2 bits (160), Expect = 1e-09
Identities = 33/53 (62%), Positives = 38/53 (71%)
Frame = +3

Query: 27 VSAAEMSLASFAELVMLAVAIVANDVSHFGALACLSTTAVAVAACLYWVWVTN 185
V E+SLAS AELVML VAIVANDV +FG LA LS +V AA +YW W+ N
Sbjct: 409 VGTTEVSLASLAELVMLGVAIVANDVKYFGGLAALSMASVVGAAWIYWHWLAN 461


>tr|Q65XT5|Q65XT5_ORYSJ Putative uncharacterized protein P0033D06.13
OS=Oryza sativa subsp. japonica GN=P0033D06.13 PE=4 SV=1
Length = 579

Score = 65.1 bits (157), Expect = 2e-09
Identities = 31/53 (58%), Positives = 40/53 (75%)
Frame = +3

Query: 27 VSAAEMSLASFAELVMLAVAIVANDVSHFGALACLSTTAVAVAACLYWVWVTN 185
+ A E+++AS AEL M+AVA+VA+D SHFGALA LS TAV AA +Y W+ N
Sbjct: 516 IGATEIAVASLAELAMMAVAVVASDASHFGALAALSATAVTAAAGMYCRWLAN 568


>tr|B8AXL9|B8AXL9_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_18327 PE=4 SV=1
Length = 605

Score = 65.1 bits (157), Expect = 2e-09
Identities = 31/53 (58%), Positives = 40/53 (75%)
Frame = +3

Query: 27 VSAAEMSLASFAELVMLAVAIVANDVSHFGALACLSTTAVAVAACLYWVWVTN 185
+ A E+++AS AEL M+AVA+VA+D SHFGALA LS TAVA A +Y W+ N
Sbjct: 540 IGATEIAVASLAELAMMAVAVVASDASHFGALAALSATAVAAATGMYCRWLAN 592


>tr|A3AZM6|A3AZM6_ORYSJ Putative uncharacterized protein OS=Oryza
sativa subsp. japonica GN=OsJ_016248 PE=4 SV=1
Length = 593

Score = 65.1 bits (157), Expect = 2e-09
Identities = 31/53 (58%), Positives = 40/53 (75%)
Frame = +3

Query: 27 VSAAEMSLASFAELVMLAVAIVANDVSHFGALACLSTTAVAVAACLYWVWVTN 185
+ A E+++AS AEL M+AVA+VA+D SHFGALA LS TAV AA +Y W+ N
Sbjct: 530 IGATEIAVASLAELAMMAVAVVASDASHFGALAALSATAVTAAAGMYCRWLAN 582


>tr|A2Y023|A2Y023_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_18330 PE=4 SV=1
Length = 593

Score = 65.1 bits (157), Expect = 2e-09
Identities = 31/53 (58%), Positives = 40/53 (75%)
Frame = +3

Query: 27 VSAAEMSLASFAELVMLAVAIVANDVSHFGALACLSTTAVAVAACLYWVWVTN 185
+ A E+++AS AEL M+AVA+VA+D SHFGALA LS TAV AA +Y W+ N
Sbjct: 530 IGATEIAVASLAELAMMAVAVVASDASHFGALAALSATAVTAAAGMYCRWLAN 582


>tr|A9TF85|A9TF85_PHYPA Predicted protein (Fragment)
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_144722 PE=4 SV=1
Length = 492

Score = 63.9 bits (154), Expect = 5e-09
Identities = 33/53 (62%), Positives = 37/53 (69%)
Frame = +3

Query: 27 VSAAEMSLASFAELVMLAVAIVANDVSHFGALACLSTTAVAVAACLYWVWVTN 185
V E+SLAS AEL ML VAIVANDV +FG LA LS AV AA +YW W+ N
Sbjct: 405 VGTTEVSLASLAELGMLGVAIVANDVKYFGHLAALSMAAVVGAAWIYWHWLAN 457


>tr|A9TER8|A9TER8_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_144466 PE=4 SV=1
Length = 513

Score = 61.6 bits (148), Expect = 3e-08
Identities = 31/53 (58%), Positives = 37/53 (69%)
Frame = +3

Query: 27 VSAAEMSLASFAELVMLAVAIVANDVSHFGALACLSTTAVAVAACLYWVWVTN 185
V E+SLAS AELVML VAIVANDV +FG LA LS + AA ++W W+ N
Sbjct: 427 VGTIEVSLASLAELVMLVVAIVANDVKYFGGLAALSMASGVGAAWIFWHWLAN 479


>tr|Q2QNK7|Q2QNK7_ORYSJ Os12g0562100 protein OS=Oryza sativa subsp.
japonica GN=Os12g0562100 PE=2 SV=1
Length = 591

Score = 60.1 bits (144), Expect = 7e-08
Identities = 29/53 (54%), Positives = 40/53 (75%)
Frame = +3

Query: 27 VSAAEMSLASFAELVMLAVAIVANDVSHFGALACLSTTAVAVAACLYWVWVTN 185
+ E+S++S AELVML +AI+ANDVSHFG LA LS ++VA AA ++ W+ N
Sbjct: 519 IGGMEVSISSLAELVMLGMAIIANDVSHFGFLAILSVSSVAGAAWMFCQWLGN 571


>tr|Q2QNK6|Q2QNK6_ORYSJ cDNA clone:J013042H16, full insert sequence
OS=Oryza sativa subsp. japonica GN=LOC_Os12g37530 PE=2
SV=1
Length = 591

Score = 60.1 bits (144), Expect = 7e-08
Identities = 29/53 (54%), Positives = 40/53 (75%)
Frame = +3

Query: 27 VSAAEMSLASFAELVMLAVAIVANDVSHFGALACLSTTAVAVAACLYWVWVTN 185
+ E+S++S AELVML +AI+ANDVSHFG LA LS ++VA AA ++ W+ N
Sbjct: 519 IGGMEVSISSLAELVMLGMAIIANDVSHFGFLAILSVSSVAGAAWMFCQWLGN 571


>tr|B8BMI3|B8BMI3_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_38730 PE=4 SV=1
Length = 614

Score = 60.1 bits (144), Expect = 7e-08
Identities = 29/53 (54%), Positives = 40/53 (75%)
Frame = +3

Query: 27 VSAAEMSLASFAELVMLAVAIVANDVSHFGALACLSTTAVAVAACLYWVWVTN 185
+ E+S++S AELVML +AI+ANDVSHFG LA LS ++VA AA ++ W+ N
Sbjct: 519 IGGMEVSISSLAELVMLGMAIIANDVSHFGFLAILSVSSVAGAAWMFCQWLGN 571