BP921015 |
Clone id |
YMU001_000144_E09 |
Library |
YMU01 |
Length |
543 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000144_E09. |
Accession |
BP921015 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL4275Contig1 |
Sequence |
GAGATATTACCTGCAGGTACTCTGCAGTGAGTGCTGCAGAAATGTCGCTAGCAAGCTTTG CAGAGTTGGTGATGCTGGCAGTGGCCATTGTTGCAAACGACGTCTCACATTTTGGTGCTC TTGCCTGTCTGTCGACAACAGCAGTTGCTGTGGCTGCCTGTTTGTACTGGGTTTGGGTAA CTAATGGAGCGACCANGGCTCCTTTTAAACAGGAGTACGTATAGCTCCCTGCCTCACTTA CTCTTTCAGCTTAGACCACTTGTTGGAAATAGGCAACATGGTCGTATGGATCACTTGTAC CATCAAATTTGTTGCACTACTTGTTATTTGCAAGCTGGCTACCTCTGAATGCGATTTGCT GATTGATGAAGATTCTAATTTTGCCATGCGTCAATAAAATGGATGCCCTGCGCAACTGGC CCACTGCTCCCAGAGAATATGCAACAGTCTAGTGATATTCAGCTCGCAGACCGAGCACAC GGTTCCCTAAGGACAGGGAACTAAAAAACCTACAGTGGATTATTTTCACAAGGAGTAACA TTC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q54U64 |
Definition |
sp|Q54U64|Y1610_DICDI Putative uncharacterized protein DDB_G0281251 OS=Dictyostelium discoideum |
Align length |
49 |
Score (bit) |
31.6 |
E-value |
2.6 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9TEN8 |
Definition |
tr|A9TEN8|A9TEN8_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens |
Align length |
53 |
Score (bit) |
66.2 |
E-value |
1.0e-09 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP921015|Adiantum capillus-veneris mRNA, clone: YMU001_000144_E09. (543 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9TEN8|A9TEN8_PHYPA Predicted protein (Fragment) OS=Physcomit... 66 1e-09 tr|Q65XT5|Q65XT5_ORYSJ Putative uncharacterized protein P0033D06... 65 2e-09 tr|B8AXL9|B8AXL9_ORYSI Putative uncharacterized protein OS=Oryza... 65 2e-09 tr|A3AZM6|A3AZM6_ORYSJ Putative uncharacterized protein OS=Oryza... 65 2e-09 tr|A2Y023|A2Y023_ORYSI Putative uncharacterized protein OS=Oryza... 65 2e-09 tr|A9TF85|A9TF85_PHYPA Predicted protein (Fragment) OS=Physcomit... 64 5e-09 tr|A9TER8|A9TER8_PHYPA Predicted protein OS=Physcomitrella paten... 62 3e-08 tr|Q2QNK7|Q2QNK7_ORYSJ Os12g0562100 protein OS=Oryza sativa subs... 60 7e-08 tr|Q2QNK6|Q2QNK6_ORYSJ cDNA clone:J013042H16, full insert sequen... 60 7e-08 tr|B8BMI3|B8BMI3_ORYSI Putative uncharacterized protein OS=Oryza... 60 7e-08 tr|A3CIG2|A3CIG2_ORYSJ Putative uncharacterized protein OS=Oryza... 60 7e-08 tr|A7PRQ4|A7PRQ4_VITVI Chromosome chr14 scaffold_27, whole genom... 56 1e-06 tr|A5AS54|A5AS54_VITVI Putative uncharacterized protein OS=Vitis... 56 1e-06 tr|Q8W4E7|Q8W4E7_ARATH Putative uncharacterized protein At5g2682... 51 4e-05 tr|A8ISE1|A8ISE1_CHLRE Predicted protein OS=Chlamydomonas reinha... 36 1.5 tr|B8A3G2|B8A3G2_MAIZE Putative uncharacterized protein OS=Zea m... 35 3.3 tr|B6UAE5|B6UAE5_MAIZE Keratin-associated protein 5-4 OS=Zea may... 35 3.3 tr|A5GU40|A5GU40_SYNR3 Uncharacterized conserved membrane protei... 35 3.4 tr|A5ECC2|A5ECC2_BRASB Putative succinate-semialdehyde dehydroge... 34 5.8 tr|A5D5A5|A5D5A5_PELTS ABC-type transport system, involved in li... 33 9.7 tr|Q5KIZ2|Q5KIZ2_CRYNE Meiotic recombination-related protein, pu... 33 9.7
>tr|A9TEN8|A9TEN8_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_144496 PE=4 SV=1 Length = 495
Score = 66.2 bits (160), Expect = 1e-09 Identities = 33/53 (62%), Positives = 38/53 (71%) Frame = +3
Query: 27 VSAAEMSLASFAELVMLAVAIVANDVSHFGALACLSTTAVAVAACLYWVWVTN 185 V E+SLAS AELVML VAIVANDV +FG LA LS +V AA +YW W+ N Sbjct: 409 VGTTEVSLASLAELVMLGVAIVANDVKYFGGLAALSMASVVGAAWIYWHWLAN 461
>tr|Q65XT5|Q65XT5_ORYSJ Putative uncharacterized protein P0033D06.13 OS=Oryza sativa subsp. japonica GN=P0033D06.13 PE=4 SV=1 Length = 579
Score = 65.1 bits (157), Expect = 2e-09 Identities = 31/53 (58%), Positives = 40/53 (75%) Frame = +3
Query: 27 VSAAEMSLASFAELVMLAVAIVANDVSHFGALACLSTTAVAVAACLYWVWVTN 185 + A E+++AS AEL M+AVA+VA+D SHFGALA LS TAV AA +Y W+ N Sbjct: 516 IGATEIAVASLAELAMMAVAVVASDASHFGALAALSATAVTAAAGMYCRWLAN 568
>tr|B8AXL9|B8AXL9_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_18327 PE=4 SV=1 Length = 605
Score = 65.1 bits (157), Expect = 2e-09 Identities = 31/53 (58%), Positives = 40/53 (75%) Frame = +3
Query: 27 VSAAEMSLASFAELVMLAVAIVANDVSHFGALACLSTTAVAVAACLYWVWVTN 185 + A E+++AS AEL M+AVA+VA+D SHFGALA LS TAVA A +Y W+ N Sbjct: 540 IGATEIAVASLAELAMMAVAVVASDASHFGALAALSATAVAAATGMYCRWLAN 592
>tr|A3AZM6|A3AZM6_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_016248 PE=4 SV=1 Length = 593
Score = 65.1 bits (157), Expect = 2e-09 Identities = 31/53 (58%), Positives = 40/53 (75%) Frame = +3
Query: 27 VSAAEMSLASFAELVMLAVAIVANDVSHFGALACLSTTAVAVAACLYWVWVTN 185 + A E+++AS AEL M+AVA+VA+D SHFGALA LS TAV AA +Y W+ N Sbjct: 530 IGATEIAVASLAELAMMAVAVVASDASHFGALAALSATAVTAAAGMYCRWLAN 582
>tr|A2Y023|A2Y023_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_18330 PE=4 SV=1 Length = 593
Score = 65.1 bits (157), Expect = 2e-09 Identities = 31/53 (58%), Positives = 40/53 (75%) Frame = +3
Query: 27 VSAAEMSLASFAELVMLAVAIVANDVSHFGALACLSTTAVAVAACLYWVWVTN 185 + A E+++AS AEL M+AVA+VA+D SHFGALA LS TAV AA +Y W+ N Sbjct: 530 IGATEIAVASLAELAMMAVAVVASDASHFGALAALSATAVTAAAGMYCRWLAN 582
>tr|A9TF85|A9TF85_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_144722 PE=4 SV=1 Length = 492
Score = 63.9 bits (154), Expect = 5e-09 Identities = 33/53 (62%), Positives = 37/53 (69%) Frame = +3
Query: 27 VSAAEMSLASFAELVMLAVAIVANDVSHFGALACLSTTAVAVAACLYWVWVTN 185 V E+SLAS AEL ML VAIVANDV +FG LA LS AV AA +YW W+ N Sbjct: 405 VGTTEVSLASLAELGMLGVAIVANDVKYFGHLAALSMAAVVGAAWIYWHWLAN 457
>tr|A9TER8|A9TER8_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_144466 PE=4 SV=1 Length = 513
Score = 61.6 bits (148), Expect = 3e-08 Identities = 31/53 (58%), Positives = 37/53 (69%) Frame = +3
Query: 27 VSAAEMSLASFAELVMLAVAIVANDVSHFGALACLSTTAVAVAACLYWVWVTN 185 V E+SLAS AELVML VAIVANDV +FG LA LS + AA ++W W+ N Sbjct: 427 VGTIEVSLASLAELVMLVVAIVANDVKYFGGLAALSMASGVGAAWIFWHWLAN 479
>tr|Q2QNK7|Q2QNK7_ORYSJ Os12g0562100 protein OS=Oryza sativa subsp. japonica GN=Os12g0562100 PE=2 SV=1 Length = 591
Score = 60.1 bits (144), Expect = 7e-08 Identities = 29/53 (54%), Positives = 40/53 (75%) Frame = +3
Query: 27 VSAAEMSLASFAELVMLAVAIVANDVSHFGALACLSTTAVAVAACLYWVWVTN 185 + E+S++S AELVML +AI+ANDVSHFG LA LS ++VA AA ++ W+ N Sbjct: 519 IGGMEVSISSLAELVMLGMAIIANDVSHFGFLAILSVSSVAGAAWMFCQWLGN 571
>tr|Q2QNK6|Q2QNK6_ORYSJ cDNA clone:J013042H16, full insert sequence OS=Oryza sativa subsp. japonica GN=LOC_Os12g37530 PE=2 SV=1 Length = 591
Score = 60.1 bits (144), Expect = 7e-08 Identities = 29/53 (54%), Positives = 40/53 (75%) Frame = +3
Query: 27 VSAAEMSLASFAELVMLAVAIVANDVSHFGALACLSTTAVAVAACLYWVWVTN 185 + E+S++S AELVML +AI+ANDVSHFG LA LS ++VA AA ++ W+ N Sbjct: 519 IGGMEVSISSLAELVMLGMAIIANDVSHFGFLAILSVSSVAGAAWMFCQWLGN 571
>tr|B8BMI3|B8BMI3_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_38730 PE=4 SV=1 Length = 614
Score = 60.1 bits (144), Expect = 7e-08 Identities = 29/53 (54%), Positives = 40/53 (75%) Frame = +3
Query: 27 VSAAEMSLASFAELVMLAVAIVANDVSHFGALACLSTTAVAVAACLYWVWVTN 185 + E+S++S AELVML +AI+ANDVSHFG LA LS ++VA AA ++ W+ N Sbjct: 519 IGGMEVSISSLAELVMLGMAIIANDVSHFGFLAILSVSSVAGAAWMFCQWLGN 571
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