BP921029 |
Clone id |
YMU001_000144_G01 |
Library |
YMU01 |
Length |
526 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000144_G01. |
Accession |
BP921029 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
ACAAGTCAGCAACACCTCCATTAGAAAACTCTTCCAATACAAGAGATAAAAGAACTATTA GCATCTCACAAGAAGACAACCTCTACACACTAATCTCACAGAGTGTACAAGAACGATTTA AGCCAGCTCCACCTTGCCCGGCACAACTAGGAAAACATCCAAGGCTGACATTGGTTGGAT ACAACAGAACTAACAATCTCCTTTGCCATCTGCATTTGTGACTCTCTGCCTTTTACAATA TTTCCCTTGTAAGAGCTCACCTCTTCCTGGCCTTTCCATGACTAGCCTCAGCGCCTCTTG CACTCTCTTGATAAAAAAGTCAACGTCATACTCGACGCAATCATCCTTGGGAGCAACTAA CAAGTCATTCTTCATCCTGCCTCCCAGAGTAGACATTTCCACCTTGAGTGTGCAAAGCTT AAGTGTATCTAATGCATGTTTCAAGTCGGCCATGAGGTCCGGTCGGTCATCACAGCATAA TGATACCCTTATCCTAATCCTGAGTACCTGCAGGTAATATCTCAAG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9S7Y1 |
Definition |
sp|Q9S7Y1|BH030_ARATH Transcription factor bHLH30 OS=Arabidopsis thaliana |
Align length |
97 |
Score (bit) |
71.2 |
E-value |
3.0e-12 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A7P327 |
Definition |
tr|A7P327|A7P327_VITVI Chromosome chr1 scaffold_5, whole genome shotgun sequence OS=Vitis vinifera |
Align length |
100 |
Score (bit) |
71.6 |
E-value |
2.0e-11 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP921029|Adiantum capillus-veneris mRNA, clone: YMU001_000144_G01. (509 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A7P327|A7P327_VITVI Chromosome chr1 scaffold_5, whole genome ... 72 2e-11 tr|Q10NS6|Q10NS6_ORYSJ Os03g0260600 protein OS=Oryza sativa subs... 68 2e-10 tr|A9P9G7|A9P9G7_POPTR Putative uncharacterized protein OS=Popul... 62 1e-08 tr|A2XER4|A2XER4_ORYSI Putative uncharacterized protein OS=Oryza... 62 2e-08 tr|B8AMC0|B8AMC0_ORYSI Putative uncharacterized protein OS=Oryza... 60 6e-08 tr|Q7XZF8|Q7XZF8_ORYSJ Putative DNA binding protein (Helix-loop-... 59 1e-07 tr|Q0DMF3|Q0DMF3_ORYSJ Os03g0811400 protein OS=Oryza sativa subs... 59 1e-07 tr|A7PJF8|A7PJF8_VITVI Chromosome chr12 scaffold_18, whole genom... 59 1e-07 tr|A7P9Y6|A7P9Y6_VITVI Chromosome chr14 scaffold_9, whole genome... 59 1e-07 tr|Q7F7Z2|Q7F7Z2_ORYSJ ESTs C26093(C11622) (Os01g0159800 protein... 59 2e-07 tr|B8ADE1|B8ADE1_ORYSI Putative uncharacterized protein OS=Oryza... 59 2e-07 tr|B7EZ72|B7EZ72_ORYSJ cDNA clone:002-101-B04, full insert seque... 59 2e-07 tr|A7Q3K4|A7Q3K4_VITVI Chromosome chr13 scaffold_48, whole genom... 59 2e-07 tr|A2ZPI6|A2ZPI6_ORYSJ Putative uncharacterized protein OS=Oryza... 59 2e-07 tr|A5B0P4|A5B0P4_VITVI Putative uncharacterized protein OS=Vitis... 57 5e-07 tr|A2Z162|A2Z162_ORYSI Putative uncharacterized protein OS=Oryza... 57 7e-07 tr|Q6ESL3|Q6ESL3_ORYSJ Os09g0410700 protein OS=Oryza sativa subs... 55 2e-06 tr|B7FKB3|B7FKB3_MEDTR Putative uncharacterized protein OS=Medic... 55 2e-06 tr|A7PT86|A7PT86_VITVI Chromosome chr8 scaffold_29, whole genome... 53 7e-06 tr|A7QDL5|A7QDL5_VITVI Chromosome chr10 scaffold_81, whole genom... 53 1e-05 tr|A5ACS4|A5ACS4_VITVI Putative uncharacterized protein (Fragmen... 53 1e-05 tr|Q6ZA99|Q6ZA99_ORYSJ Os08g0432800 protein OS=Oryza sativa subs... 50 5e-05 tr|B8BB09|B8BB09_ORYSI Putative uncharacterized protein OS=Oryza... 50 5e-05 tr|A6XN04|A6XN04_PRUPE Putative uncharacterized protein OS=Prunu... 50 8e-05 tr|Q75IR0|Q75IR0_ORYSJ Os05g0163900 protein OS=Oryza sativa subs... 48 2e-04 tr|Q6ZJC8|Q6ZJC8_ORYSJ Os08g0477900 protein OS=Oryza sativa subs... 48 2e-04 tr|B8BBS1|B8BBS1_ORYSI Putative uncharacterized protein OS=Oryza... 48 2e-04 tr|B6U8E0|B6U8E0_MAIZE DNA binding protein OS=Zea mays PE=2 SV=1 48 2e-04 tr|A3B0A4|A3B0A4_ORYSJ Putative uncharacterized protein OS=Oryza... 48 2e-04 tr|A2Y0Q7|A2Y0Q7_ORYSI Putative uncharacterized protein OS=Oryza... 48 2e-04
>tr|A7P327|A7P327_VITVI Chromosome chr1 scaffold_5, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00030280001 PE=4 SV=1 Length = 349
Score = 71.6 bits (174), Expect = 2e-11 Identities = 42/100 (42%), Positives = 57/100 (57%), Gaps = 10/100 (10%) Frame = -2
Query: 475 IRVSLCCDDRPDLMADLKHALDTLKLCTLKVEMSTLGGRMKNDLLVAPKDDC-------- 320 I+ SLCC+DR DL+ DL L L+L TLK E++TLGGR+KN L + ++D Sbjct: 240 IKASLCCEDRTDLLPDLIKTLKALRLRTLKAEITTLGGRVKNVLFITGEEDSSSSGENQQ 299
Query: 319 --VEYDVDFFIKRVQEALRLVMERPGRGELLQGKYCKRQR 206 + + I +QEAL+ VME+ G E G KRQR Sbjct: 300 QQQQQQQQYSISSIQEALKAVMEKTGGDESSSGS-VKRQR 338
>tr|Q10NS6|Q10NS6_ORYSJ Os03g0260600 protein OS=Oryza sativa subsp. japonica GN=Os03g0260600 PE=4 SV=1 Length = 409
Score = 68.2 bits (165), Expect = 2e-10 Identities = 48/121 (39%), Positives = 60/121 (49%), Gaps = 25/121 (20%) Frame = -2
Query: 484 RIRIRVSLCCDDRPDLMADLKHALDTLKLCTLKVEMSTLGGRMKNDLLVAPKDD-----C 320 R+ +R SLCCDDR DL+ DL AL L+L LK E++TLGGR+KN L+V D C Sbjct: 279 RLVVRASLCCDDRTDLLPDLIRALKALRLRALKAEITTLGGRVKNVLVVTGDDSAAAAAC 338
Query: 319 VEYDVD---------------FFIKRVQEALRLVMERPG-----RGELLQGKYCKRQRVT 200 D D + +Q+ALR VMER G G KRQR T Sbjct: 339 AGTDGDGEQQEEAMQAPMSPQHTVASIQDALRAVMERTASATEESGGSGAGGGLKRQRTT 398
Query: 199 N 197 + Sbjct: 399 S 399
>tr|A9P9G7|A9P9G7_POPTR Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1 Length = 241
Score = 62.4 bits (150), Expect = 1e-08 Identities = 35/78 (44%), Positives = 47/78 (60%) Frame = -2
Query: 472 RVSLCCDDRPDLMADLKHALDTLKLCTLKVEMSTLGGRMKNDLLVAPKDDCVEYDVDFFI 293 + SLCC+DR DLM +L L +L L TLK EM TLGGR++N L++A D V F Sbjct: 153 KASLCCEDRLDLMPELNEILKSLHLKTLKAEMVTLGGRIRNVLIIAADKDHSVESVHF-- 210
Query: 292 KRVQEALRLVMERPGRGE 239 +Q AL+ ++ER E Sbjct: 211 --LQNALKSLLERSNSSE 226
>tr|A2XER4|A2XER4_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_10828 PE=4 SV=1 Length = 468
Score = 62.0 bits (149), Expect = 2e-08 Identities = 30/53 (56%), Positives = 38/53 (71%) Frame = -2
Query: 484 RIRIRVSLCCDDRPDLMADLKHALDTLKLCTLKVEMSTLGGRMKNDLLVAPKD 326 R+ +R SLCCDDR DL+ DL AL L+L LK E++TLGGR+KN L+V D Sbjct: 259 RLVVRASLCCDDRTDLLPDLIRALKALRLRALKAEITTLGGRVKNVLVVTGDD 311
>tr|B8AMC0|B8AMC0_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_14022 PE=4 SV=1 Length = 313
Score = 60.1 bits (144), Expect = 6e-08 Identities = 42/107 (39%), Positives = 58/107 (54%), Gaps = 17/107 (15%) Frame = -2
Query: 466 SLCCDDRPDLMADLKHALDTLKLCTLKVEMSTLGGRMKNDLLVA-----------PKDDC 320 S+CCDDR DL+ +L L L+L TL+ EM+TLGGR++N L++A DD Sbjct: 206 SVCCDDRSDLLPELIETLRALRLRTLRAEMATLGGRVRNVLVLARDAGGAGEGGDGDDDR 265
Query: 319 VEYDV------DFFIKRVQEALRLVMERPGRGELLQGKYCKRQRVTN 197 Y DF ++EALR ++ERPG G KR+RV + Sbjct: 266 AGYSAVSNDGGDF----LKEALRALVERPGAA---AGDRPKRRRVVS 305
>tr|Q7XZF8|Q7XZF8_ORYSJ Putative DNA binding protein (Helix-loop-helix DNA-binding domain containing protein, expressed) OS=Oryza sativa subsp. japonica GN=OSJNBb0033J23.9 PE=4 SV=1 Length = 268
Score = 59.3 bits (142), Expect = 1e-07 Identities = 42/107 (39%), Positives = 58/107 (54%), Gaps = 17/107 (15%) Frame = -2
Query: 466 SLCCDDRPDLMADLKHALDTLKLCTLKVEMSTLGGRMKNDLLVA-----------PKDDC 320 S+CCDDR DL+ +L L L+L TL+ EM+TLGGR++N L++A DD Sbjct: 161 SVCCDDRCDLLPELIETLRALRLRTLRAEMATLGGRVRNVLVLARDAGGAGEGGDGDDDR 220
Query: 319 VEYDV------DFFIKRVQEALRLVMERPGRGELLQGKYCKRQRVTN 197 Y DF ++EALR ++ERPG G KR+RV + Sbjct: 221 AGYSAVSNDGGDF----LKEALRALVERPGAA---AGDRPKRRRVVS 260
>tr|Q0DMF3|Q0DMF3_ORYSJ Os03g0811400 protein OS=Oryza sativa subsp. japonica GN=Os03g0811400 PE=4 SV=1 Length = 301
Score = 59.3 bits (142), Expect = 1e-07 Identities = 42/107 (39%), Positives = 58/107 (54%), Gaps = 17/107 (15%) Frame = -2
Query: 466 SLCCDDRPDLMADLKHALDTLKLCTLKVEMSTLGGRMKNDLLVA-----------PKDDC 320 S+CCDDR DL+ +L L L+L TL+ EM+TLGGR++N L++A DD Sbjct: 194 SVCCDDRCDLLPELIETLRALRLRTLRAEMATLGGRVRNVLVLARDAGGAGEGGDGDDDR 253
Query: 319 VEYDV------DFFIKRVQEALRLVMERPGRGELLQGKYCKRQRVTN 197 Y DF ++EALR ++ERPG G KR+RV + Sbjct: 254 AGYSAVSNDGGDF----LKEALRALVERPGAA---AGDRPKRRRVVS 293
>tr|A7PJF8|A7PJF8_VITVI Chromosome chr12 scaffold_18, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00018717001 PE=4 SV=1 Length = 259
Score = 59.3 bits (142), Expect = 1e-07 Identities = 31/77 (40%), Positives = 49/77 (63%), Gaps = 3/77 (3%) Frame = -2
Query: 475 IRVSLCCDDRPDLMADLKHALDTLKLCTLKVEMSTLGGRMKNDLLVAPKDDCVEYDVD-- 302 I+ SLCCD +P +++DL+ ALDT+ L T++ E++TLGGRMKN ++ D D + Sbjct: 148 IKASLCCDYKPGVLSDLRRALDTVHLKTVRAEIATLGGRMKNVFVMTGCKDGNLEDTETR 207
Query: 301 -FFIKRVQEALRLVMER 254 V +ALR V+++ Sbjct: 208 KLHANSVHQALRSVLDK 224
>tr|A7P9Y6|A7P9Y6_VITVI Chromosome chr14 scaffold_9, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00037902001 PE=4 SV=1 Length = 263
Score = 59.3 bits (142), Expect = 1e-07 Identities = 26/42 (61%), Positives = 35/42 (83%) Frame = -2
Query: 475 IRVSLCCDDRPDLMADLKHALDTLKLCTLKVEMSTLGGRMKN 350 +R S+CCD RP+L++ +K ALDTL + T+K E+STLGGRMKN Sbjct: 151 LRASVCCDYRPELLSYIKQALDTLPINTVKAEISTLGGRMKN 192
>tr|Q7F7Z2|Q7F7Z2_ORYSJ ESTs C26093(C11622) (Os01g0159800 protein) OS=Oryza sativa subsp. japonica GN=Os01g0159800 PE=4 SV=1 Length = 258
Score = 58.5 bits (140), Expect = 2e-07 Identities = 33/94 (35%), Positives = 59/94 (62%), Gaps = 3/94 (3%) Frame = -2
Query: 475 IRVSLCCDDRPDLMADLKHALDTLKLCTLKVEMSTLGGRMKNDLLVAPKDDCVEYDVDFF 296 I+ S+ CDDRPDL+A + HA L+L T++ EM++LGGR+++ + + +++ + V Sbjct: 158 IKASISCDDRPDLIAGITHAFHGLRLRTVRAEMTSLGGRVQH-VFILCREEGIAGGVS-- 214
Query: 295 IKRVQEALRLVMERPGRGELLQGK---YCKRQRV 203 +K ++EA+R + + EL+ G KRQR+ Sbjct: 215 LKSLKEAVRQALAKVASPELVYGSSHFQSKRQRI 248
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