BP921034 |
Clone id |
YMU001_000144_G06 |
Library |
YMU01 |
Length |
490 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000144_G06. |
Accession |
BP921034 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL376Contig1 |
Sequence |
GCTGGTCTGCCTCTGCTCAGCATTTCATCTGATTCATCAAGGACAAGAAGCTTCATGGCC CTTGTTCCTAAAGTCCTCCTTTTTATCATGTCATAAACCCTTCCTGGCGTTCCAGAGACC ACATGGACACCGTTCTCAAGCTTTCTTATATCCTCCCCAATGTTTTTACCACCAATGCAA GAATGGGCCCGCACATTTATATAATCACCAATGGCTAAAATAACCTTTTCAGTCTGAGCT GCCAGCTCTCTAGTCGGAGATAGGATTAAAGCCTGCACCTCTCTAACAGTTGTGTCGATA ATTTGGCACACAGCAAGGGCAATCATGGAAGTCTTCCCAGTACCAGACTGGGCCTGCGCT ATGACATCACGATTCTGGATGATGGGCCGTATGGCATGCTGCTGAATAGCTGAAGGTTTT TCAAAACCATAGGCATAGATTCCACGAAGAAGCTCATCTCGAATGCCCATGCTGTCGAAC GTGCTGTATA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q10I26 |
Definition |
sp|Q10I26|RH34_ORYSJ DEAD-box ATP-dependent RNA helicase 34 OS=Oryza sativa subsp. japonica |
Align length |
159 |
Score (bit) |
266.0 |
E-value |
3.0e-71 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9NUU4 |
Definition |
tr|A9NUU4|A9NUU4_PICSI Putative uncharacterized protein OS=Picea sitchensis |
Align length |
159 |
Score (bit) |
273.0 |
E-value |
4.0e-72 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP921034|Adiantum capillus-veneris mRNA, clone: YMU001_000144_G06. (490 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9NUU4|A9NUU4_PICSI Putative uncharacterized protein OS=Picea... 273 4e-72 tr|A9TNS6|A9TNS6_PHYPA Predicted protein OS=Physcomitrella paten... 271 2e-71 tr|O65879|O65879_PEA Translation initiation factor OS=Pisum sati... 269 5e-71 tr|A8DX61|A8DX61_MEDSA DH OS=Medicago sativa PE=2 SV=1 269 6e-71 tr|A9U4K0|A9U4K0_PHYPA Predicted protein OS=Physcomitrella paten... 267 2e-70 tr|A7QFA1|A7QFA1_VITVI Chromosome undetermined scaffold_87, whol... 267 2e-70 tr|A5C5V5|A5C5V5_VITVI Putative uncharacterized protein OS=Vitis... 267 2e-70 tr|B7EMG9|B7EMG9_ORYSJ cDNA clone:J033052B21, full insert sequen... 266 3e-70 tr|A3AJN1|A3AJN1_ORYSJ Putative uncharacterized protein OS=Oryza... 266 3e-70 tr|A2ZVV2|A2ZVV2_ORYSJ Putative uncharacterized protein OS=Oryza... 266 3e-70 tr|B8AKV8|B8AKV8_ORYSI Putative uncharacterized protein OS=Oryza... 265 1e-69 tr|Q2MJJ9|Q2MJJ9_MAIZE Putative RH2 protein (RNA helicase 2) (Pu... 264 1e-69 tr|B5AKW1|B5AKW1_PENAM eIF-4A OS=Pennisetum americanum PE=2 SV=1 263 4e-69 tr|A2WT17|A2WT17_ORYSI Putative uncharacterized protein OS=Oryza... 260 3e-68 tr|A8JBN7|A8JBN7_CHLRE Eukaryotic initiation factor OS=Chlamydom... 248 1e-64 tr|Q00XK3|Q00XK3_OSTTA Putative nicotiana eukaryotic (ISS) OS=Os... 246 5e-64 tr|A4S618|A4S618_OSTLU Predicted protein OS=Ostreococcus lucimar... 243 5e-63 tr|B7QER9|B7QER9_IXOSC DEAD box ATP-dependent RNA helicase, puta... 239 5e-62 tr|A8D930|A8D930_9GENT ATP-dependent DEAD-box helicase OS=Apocyn... 238 1e-61 tr|Q0PZE7|Q0PZE7_BOMMO EIF4AIII protein OS=Bombyx mori PE=2 SV=1 238 1e-61 tr|B6PI66|B6PI66_BRAFL Putative uncharacterized protein (Fragmen... 237 2e-61 tr|B6MJV0|B6MJV0_BRAFL Putative uncharacterized protein OS=Branc... 237 2e-61 tr|A8WW00|A8WW00_CAEBR Putative uncharacterized protein OS=Caeno... 237 2e-61 tr|Q9BL61|Q9BL61_CAEEL Putative uncharacterized protein OS=Caeno... 236 6e-61 tr|Q7PQQ2|Q7PQQ2_ANOGA AGAP003089-PA OS=Anopheles gambiae GN=AGA... 236 6e-61 tr|A8WZ62|A8WZ62_CAEBR Putative uncharacterized protein OS=Caeno... 236 6e-61 tr|Q16GE2|Q16GE2_AEDAE DEAD box ATP-dependent RNA helicase OS=Ae... 235 7e-61 tr|O44781|O44781_CAEEL Putative uncharacterized protein OS=Caeno... 235 7e-61 tr|A8P212|A8P212_BRUMA ATP-dependent helicase DDX48, putative (F... 234 1e-60 tr|B5DG42|B5DG42_SALSA Eukaryotic initiation factor 4A-III OS=Sa... 234 2e-60
>tr|A9NUU4|A9NUU4_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 408
Score = 273 bits (697), Expect = 4e-72 Identities = 139/159 (87%), Positives = 150/159 (94%) Frame = -3
Query: 485 STFDSMGIRDELLRGIYAYGFEKPSAIQQHAIRPIIQNRDVIAQAQSGTGKTSMIALAVC 306 S+FD MGIRD+LLRGIY YGFEKPSAIQQ A+ PII RDVIAQAQSGTGKTSMIALAVC Sbjct: 35 SSFDQMGIRDDLLRGIYQYGFEKPSAIQQRAVMPIINGRDVIAQAQSGTGKTSMIALAVC 94
Query: 305 QIIDTTVREVQALILSPTRELAAQTEKVILAIGDYINVRAHSCIGGKNIGEDIRKLENGV 126 QIIDT++REVQALI+SPTRELAAQTEKVILAIGD+INV+AH+CIGGK+IGEDIRKLE GV Sbjct: 95 QIIDTSIREVQALIVSPTRELAAQTEKVILAIGDFINVQAHACIGGKSIGEDIRKLEYGV 154
Query: 125 HVVSGTPGRVYDMIKRRTLGTRAMKLLVLDESDEMLSRG 9 HVVSGTPGRV DMIKRRTL TRA+KLLVLDESDEMLSRG Sbjct: 155 HVVSGTPGRVCDMIKRRTLRTRAVKLLVLDESDEMLSRG 193
>tr|A9TNS6|A9TNS6_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_60709 PE=4 SV=1 Length = 397
Score = 271 bits (692), Expect = 2e-71 Identities = 136/159 (85%), Positives = 149/159 (93%) Frame = -3
Query: 485 STFDSMGIRDELLRGIYAYGFEKPSAIQQHAIRPIIQNRDVIAQAQSGTGKTSMIALAVC 306 S+FD MGIR++LLRGIYAYGFEKPSAIQQ A+ PII RD IAQAQSGTGKTSMIALAVC Sbjct: 24 SSFDQMGIREDLLRGIYAYGFEKPSAIQQRAVMPIISGRDAIAQAQSGTGKTSMIALAVC 83
Query: 305 QIIDTTVREVQALILSPTRELAAQTEKVILAIGDYINVRAHSCIGGKNIGEDIRKLENGV 126 Q+IDT REVQALILSPTRELAAQTEKVILAIGD++NV+AH+CIGGK+IGEDIRKLE GV Sbjct: 84 QMIDTATREVQALILSPTRELAAQTEKVILAIGDFMNVQAHACIGGKSIGEDIRKLEYGV 143
Query: 125 HVVSGTPGRVYDMIKRRTLGTRAMKLLVLDESDEMLSRG 9 HVVSGTPGRVYDMIKRRTL TR++KLL+LDESDEMLSRG Sbjct: 144 HVVSGTPGRVYDMIKRRTLRTRSIKLLILDESDEMLSRG 182
>tr|O65879|O65879_PEA Translation initiation factor OS=Pisum sativum GN=eIF-4A PE=2 SV=1 Length = 407
Score = 269 bits (688), Expect = 5e-71 Identities = 133/159 (83%), Positives = 151/159 (94%) Frame = -3
Query: 485 STFDSMGIRDELLRGIYAYGFEKPSAIQQHAIRPIIQNRDVIAQAQSGTGKTSMIALAVC 306 +TF+ MGI+++LLRGIYAYGFEKPSAIQQ A+ PIIQ RDVIAQAQSGTGKTSMIAL VC Sbjct: 33 ATFEGMGIKEDLLRGIYAYGFEKPSAIQQRAVAPIIQGRDVIAQAQSGTGKTSMIALTVC 92
Query: 305 QIIDTTVREVQALILSPTRELAAQTEKVILAIGDYINVRAHSCIGGKNIGEDIRKLENGV 126 Q++DT+VREVQALI+SPTRELA QTEKVILAIGD+IN++AH+CIGGK++GEDIRKLE+GV Sbjct: 93 QVVDTSVREVQALIVSPTRELATQTEKVILAIGDHINIQAHACIGGKSVGEDIRKLEHGV 152
Query: 125 HVVSGTPGRVYDMIKRRTLGTRAMKLLVLDESDEMLSRG 9 HVVSGTPGRV DMIKRRTL TRA+KLLVLDESDEMLSRG Sbjct: 153 HVVSGTPGRVCDMIKRRTLRTRAIKLLVLDESDEMLSRG 191
>tr|A8DX61|A8DX61_MEDSA DH OS=Medicago sativa PE=2 SV=1 Length = 406
Score = 269 bits (687), Expect = 6e-71 Identities = 133/158 (84%), Positives = 150/158 (94%) Frame = -3
Query: 482 TFDSMGIRDELLRGIYAYGFEKPSAIQQHAIRPIIQNRDVIAQAQSGTGKTSMIALAVCQ 303 +F+ MGI+D+LLRGIY YGFEKPSAIQQ A+ PIIQ RDVIAQAQSGTGKTSMIAL VCQ Sbjct: 34 SFEEMGIKDDLLRGIYNYGFEKPSAIQQRAVAPIIQGRDVIAQAQSGTGKTSMIALTVCQ 93
Query: 302 IIDTTVREVQALILSPTRELAAQTEKVILAIGDYINVRAHSCIGGKNIGEDIRKLENGVH 123 ++DT+VREVQALI+SPTRELA+QTEKVILAIGDYIN++AH+CIGGK++GEDIRKLE+GVH Sbjct: 94 VVDTSVREVQALIVSPTRELASQTEKVILAIGDYINIQAHACIGGKSVGEDIRKLEHGVH 153
Query: 122 VVSGTPGRVYDMIKRRTLGTRAMKLLVLDESDEMLSRG 9 VVSGTPGRV DMIKRRTL TRA+KLLVLDESDEMLSRG Sbjct: 154 VVSGTPGRVCDMIKRRTLRTRAIKLLVLDESDEMLSRG 191
>tr|A9U4K0|A9U4K0_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_109347 PE=4 SV=1 Length = 395
Score = 267 bits (682), Expect = 2e-70 Identities = 134/159 (84%), Positives = 147/159 (92%) Frame = -3
Query: 485 STFDSMGIRDELLRGIYAYGFEKPSAIQQHAIRPIIQNRDVIAQAQSGTGKTSMIALAVC 306 S+FD MGIR++LLRGIYAYGFEKPSAIQQ A+ PII RD IAQAQSGTGKTSMIAL VC Sbjct: 22 SSFDQMGIREDLLRGIYAYGFEKPSAIQQRAVMPIISGRDAIAQAQSGTGKTSMIALTVC 81
Query: 305 QIIDTTVREVQALILSPTRELAAQTEKVILAIGDYINVRAHSCIGGKNIGEDIRKLENGV 126 Q+ID REVQALILSPTRELAAQTEKVILAIGD++NV+AH+CIGGK+IGEDIRKLE GV Sbjct: 82 QMIDIATREVQALILSPTRELAAQTEKVILAIGDFMNVQAHACIGGKSIGEDIRKLEYGV 141
Query: 125 HVVSGTPGRVYDMIKRRTLGTRAMKLLVLDESDEMLSRG 9 HVVSGTPGRVYDMIKRRTL TR++KLL+LDESDEMLSRG Sbjct: 142 HVVSGTPGRVYDMIKRRTLRTRSIKLLILDESDEMLSRG 180
>tr|A7QFA1|A7QFA1_VITVI Chromosome undetermined scaffold_87, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00037338001 PE=4 SV=1 Length = 415
Score = 267 bits (682), Expect = 2e-70 Identities = 133/158 (84%), Positives = 149/158 (94%) Frame = -3
Query: 482 TFDSMGIRDELLRGIYAYGFEKPSAIQQHAIRPIIQNRDVIAQAQSGTGKTSMIALAVCQ 303 +FD MGI+D+LLRGIYAYGFEKPSAIQQ A+ PIIQ RDVIAQAQSGTGKTSMIAL VCQ Sbjct: 40 SFDQMGIKDDLLRGIYAYGFEKPSAIQQRAVLPIIQGRDVIAQAQSGTGKTSMIALTVCQ 99
Query: 302 IIDTTVREVQALILSPTRELAAQTEKVILAIGDYINVRAHSCIGGKNIGEDIRKLENGVH 123 ++DT+ REVQALILSPTRELA+QTEKVILAIGD+IN++AH+CIGGK++GEDIRKLE GVH Sbjct: 100 MVDTSNREVQALILSPTRELASQTEKVILAIGDFINIQAHACIGGKSVGEDIRKLEYGVH 159
Query: 122 VVSGTPGRVYDMIKRRTLGTRAMKLLVLDESDEMLSRG 9 +VSGTPGRV DMIKRRTL TRA+KLLVLDESDEMLSRG Sbjct: 160 IVSGTPGRVCDMIKRRTLRTRAIKLLVLDESDEMLSRG 197
>tr|A5C5V5|A5C5V5_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_037577 PE=4 SV=1 Length = 398
Score = 267 bits (682), Expect = 2e-70 Identities = 133/158 (84%), Positives = 149/158 (94%) Frame = -3
Query: 482 TFDSMGIRDELLRGIYAYGFEKPSAIQQHAIRPIIQNRDVIAQAQSGTGKTSMIALAVCQ 303 +FD MGI+D+LLRGIYAYGFEKPSAIQQ A+ PIIQ RDVIAQAQSGTGKTSMIAL VCQ Sbjct: 23 SFDQMGIKDDLLRGIYAYGFEKPSAIQQRAVLPIIQGRDVIAQAQSGTGKTSMIALTVCQ 82
Query: 302 IIDTTVREVQALILSPTRELAAQTEKVILAIGDYINVRAHSCIGGKNIGEDIRKLENGVH 123 ++DT+ REVQALILSPTRELA+QTEKVILAIGD+IN++AH+CIGGK++GEDIRKLE GVH Sbjct: 83 MVDTSNREVQALILSPTRELASQTEKVILAIGDFINIQAHACIGGKSVGEDIRKLEYGVH 142
Query: 122 VVSGTPGRVYDMIKRRTLGTRAMKLLVLDESDEMLSRG 9 +VSGTPGRV DMIKRRTL TRA+KLLVLDESDEMLSRG Sbjct: 143 IVSGTPGRVCDMIKRRTLRTRAIKLLVLDESDEMLSRG 180
>tr|B7EMG9|B7EMG9_ORYSJ cDNA clone:J033052B21, full insert sequence OS=Oryza sativa subsp. japonica PE=2 SV=1 Length = 404
Score = 266 bits (681), Expect = 3e-70 Identities = 132/159 (83%), Positives = 149/159 (93%) Frame = -3
Query: 485 STFDSMGIRDELLRGIYAYGFEKPSAIQQHAIRPIIQNRDVIAQAQSGTGKTSMIALAVC 306 S+FD MGIRD+LLRGIYAYGFEKPSAIQQ A+ PII RDVIAQAQSGTGKTSMI+L+VC Sbjct: 31 SSFDQMGIRDDLLRGIYAYGFEKPSAIQQRAVLPIISGRDVIAQAQSGTGKTSMISLSVC 90
Query: 305 QIIDTTVREVQALILSPTRELAAQTEKVILAIGDYINVRAHSCIGGKNIGEDIRKLENGV 126 QI+DT VREVQALILSPTRELAAQTE+V+LAIGD+IN++ H+CIGGK+IGEDIRKLE+GV Sbjct: 91 QIVDTAVREVQALILSPTRELAAQTERVMLAIGDFINIQVHACIGGKSIGEDIRKLEHGV 150
Query: 125 HVVSGTPGRVYDMIKRRTLGTRAMKLLVLDESDEMLSRG 9 HVVSGTPGRV DMIKRRTL TRA+KLL+LDE+DEML RG Sbjct: 151 HVVSGTPGRVCDMIKRRTLRTRAIKLLILDEADEMLGRG 189
>tr|A3AJN1|A3AJN1_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_011003 PE=3 SV=1 Length = 394
Score = 266 bits (681), Expect = 3e-70 Identities = 132/159 (83%), Positives = 149/159 (93%) Frame = -3
Query: 485 STFDSMGIRDELLRGIYAYGFEKPSAIQQHAIRPIIQNRDVIAQAQSGTGKTSMIALAVC 306 S+FD MGIR++LLRGIYAYGFEKPSAIQQ A+ PII RDVIAQAQSGTGKTSMI+L+VC Sbjct: 31 SSFDQMGIREDLLRGIYAYGFEKPSAIQQRAVLPIISGRDVIAQAQSGTGKTSMISLSVC 90
Query: 305 QIIDTTVREVQALILSPTRELAAQTEKVILAIGDYINVRAHSCIGGKNIGEDIRKLENGV 126 QI+DT VREVQALILSPTRELAAQTE+V+LAIGDYIN++ H+CIGGK+IGEDIRKLE+GV Sbjct: 91 QIVDTAVREVQALILSPTRELAAQTERVMLAIGDYINIQVHACIGGKSIGEDIRKLEHGV 150
Query: 125 HVVSGTPGRVYDMIKRRTLGTRAMKLLVLDESDEMLSRG 9 HVVSGTPGRV DMIKRRTL TRA+KLL+LDE+DEML RG Sbjct: 151 HVVSGTPGRVCDMIKRRTLRTRAIKLLILDEADEMLGRG 189
>tr|A2ZVV2|A2ZVV2_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_002674 PE=3 SV=1 Length = 394
Score = 266 bits (681), Expect = 3e-70 Identities = 132/159 (83%), Positives = 149/159 (93%) Frame = -3
Query: 485 STFDSMGIRDELLRGIYAYGFEKPSAIQQHAIRPIIQNRDVIAQAQSGTGKTSMIALAVC 306 S+FD MGIRD+LLRGIYAYGFEKPSAIQQ A+ PII RDVIAQAQSGTGKTSMI+L+VC Sbjct: 31 SSFDQMGIRDDLLRGIYAYGFEKPSAIQQRAVLPIISGRDVIAQAQSGTGKTSMISLSVC 90
Query: 305 QIIDTTVREVQALILSPTRELAAQTEKVILAIGDYINVRAHSCIGGKNIGEDIRKLENGV 126 QI+DT VREVQALILSPTRELAAQTE+V+LAIGD+IN++ H+CIGGK+IGEDIRKLE+GV Sbjct: 91 QIVDTAVREVQALILSPTRELAAQTERVMLAIGDFINIQVHACIGGKSIGEDIRKLEHGV 150
Query: 125 HVVSGTPGRVYDMIKRRTLGTRAMKLLVLDESDEMLSRG 9 HVVSGTPGRV DMIKRRTL TRA+KLL+LDE+DEML RG Sbjct: 151 HVVSGTPGRVCDMIKRRTLRTRAIKLLILDEADEMLGRG 189
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