BP921035
Clone id YMU001_000144_G07
Library
Length 486
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000144_G07.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
CTAGTAACTGATATGACAATAAGAAACAAGGTATTCGAGACTCAAGAGATCTATTCAATC
GTCAAGTGATACAACTTCAATTTTTCGGATTGCCCTTTTACAATCCGGTTGCATATGCCA
CAATGGTATGCCCTCCGAATTGCAACCCTTCAACCAGAAAACTCGCAAAAATGGAACCAT
TGTCGAGTCTTTTCGTGCTTTCGATGCTCTTCCCGAGCTTCCCTTGTCTTCTCCAATTGT
TCTCAAGAGCAAGAATTGCCTTCTACTACAGTCGGCTCCAATAAACCCTCCCAATAACCC
CCAAAAATGGCCAAAAGGGATCCCCAAATTGATACAAAATTGGCCTTAATAGGAAGGTCC
TTTGCATTTTTAGAAACTTTATTTCCAATGGTTTTACCAGCACTTTACTTTTGGAAATTT
TTGATCCGCTTGCATGCTCTAGCTCCATCTGCTGAGTGCTCTCTTCTTTGTCTCTCCCTC
TCTCTC
■■Homology search results ■■ -
sp_hit_id Q9HGP5
Definition sp|Q9HGP5|CAPZB_SCHPO F-actin-capping protein subunit beta OS=Schizosaccharomyces pombe
Align length 109
Score (bit) 32.0
E-value 1.5
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP921035|Adiantum capillus-veneris mRNA, clone:
YMU001_000144_G07.
(486 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q9HGP5|CAPZB_SCHPO F-actin-capping protein subunit beta OS=Sc... 32 1.5
sp|P90900|IFA4_CAEEL Intermediate filament protein ifa-4 OS=Caen... 30 5.8
sp|Q46G00|Y208_METBF UPF0285 protein Mbar_A0208 OS=Methanosarcin... 29 9.8

>sp|Q9HGP5|CAPZB_SCHPO F-actin-capping protein subunit beta
OS=Schizosaccharomyces pombe GN=acp2 PE=1 SV=1
Length = 268

Score = 32.0 bits (71), Expect = 1.5
Identities = 31/109 (28%), Positives = 47/109 (43%), Gaps = 13/109 (11%)
Frame = +1

Query: 130 ALRIATLQPENSQKWNHCRVFSC----------FRCSSRASLVFSNCSQEQE-LPSTTVG 276
A+ I NS W+ VF C +R +S L S+ S+EQ LPS +
Sbjct: 129 AVLIKKASTSNSSGWDSIHVFECLPTTETNVYDYRLTSTIILFLSSGSEEQSALPSKAL- 187

Query: 277 SNKPSQ*PPKMAKRDPQID--TKLALIGRSFAFLETLFPMVLPALYFWK 417
N + ++R P D T++A +G+ +ET L +YF K
Sbjct: 188 -NLSGHLTRQTSQRLPAADDDTEIANVGKLVEEMETRMRNFLQDVYFGK 235


>sp|P90900|IFA4_CAEEL Intermediate filament protein ifa-4
OS=Caenorhabditis elegans GN=ifa-4 PE=1 SV=1
Length = 575

Score = 30.0 bits (66), Expect = 5.8
Identities = 12/53 (22%), Positives = 25/53 (47%)
Frame = +1

Query: 10 DMTIRNKVFETQEIYSIVK*YNFNFSDCPFTIRLHMPQWYALRIATLQPENSQ 168
D T+ N+ + E+ S ++ + T R + WY L++ + +NS+
Sbjct: 264 DTTVENREYFKNELSSAIREIRSEYDHVSNTTRTDIESWYKLKVQEIHTQNSR 316


>sp|Q46G00|Y208_METBF UPF0285 protein Mbar_A0208 OS=Methanosarcina
barkeri (strain Fusaro / DSM 804) GN=Mbar_A0208 PE=3
SV=1
Length = 325

Score = 29.3 bits (64), Expect = 9.8
Identities = 18/50 (36%), Positives = 26/50 (52%)
Frame = -3

Query: 463 ESTQQMELEHASGSKISKSKVLVKPLEIKFLKMQRTFLLRPILYQFGDPF 314
EST ELE A + +S++++L LE F + T L + Y GD F
Sbjct: 21 ESTHTFELERAEAAAMSENEILTS-LEEHFGIRRETINLIALTYSMGDGF 69


tr_hit_id Q2LWW4
Definition tr|Q2LWW4|Q2LWW4_SYNAS Sensor protein OS=Syntrophus aciditrophicus (strain SB)
Align length 67
Score (bit) 35.4
E-value 1.4
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP921035|Adiantum capillus-veneris mRNA, clone:
YMU001_000144_G07.
(486 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q2LWW4|Q2LWW4_SYNAS Sensor protein OS=Syntrophus aciditrophic... 35 1.4
tr|B6FFM1|B6FFM1_9ENTR Putative uncharacterized protein OS=Enter... 34 3.1
tr|Q1ZXJ5|Q1ZXJ5_DICDI Ankyrin repeat-containing protein OS=Dict... 34 3.1
tr|Q8DLY5|Q8DLY5_THEEB Tlr0341 protein OS=Thermosynechococcus el... 33 5.3
tr|B0XAR8|B0XAR8_CULQU Predicted protein OS=Culex quinquefasciat... 33 5.3
tr|A8CBG4|A8CBG4_TOXGO Pitrilysin-like stromal processing peptid... 33 5.3
tr|A8CBG3|A8CBG3_TOXGO Delta-aminolevulinic acid dehydratase OS=... 33 5.3
tr|A8CBF8|A8CBF8_TOXGO Delta-aminolevulinic acid dehydratase OS=... 33 5.3
tr|B6AJU8|B6AJU8_9CRYT Putative uncharacterized protein OS=Crypt... 33 7.0
tr|B0WRW1|B0WRW1_CULQU Predicted protein OS=Culex quinquefasciat... 33 7.0
tr|Q90WB5|Q90WB5_ANAPL T-cell surface glycoprotein CD4 OS=Anas p... 33 7.2
tr|Q50EU7|Q50EU7_ANAPL T cell antigen CD4 OS=Anas platyrhynchos ... 33 7.2
tr|B8YEL3|B8YEL3_ANAPL T-cell surface glycoprotein CD4 OS=Anas p... 33 7.2
tr|B8YEL2|B8YEL2_ANAPL T-cell surface glycoprotein CD4 OS=Anas p... 33 7.2
tr|A8IJE8|A8IJE8_CHLRE Predicted protein (Fragment) OS=Chlamydom... 33 9.1
tr|A9V689|A9V689_MONBE Predicted protein OS=Monosiga brevicollis... 33 9.1
tr|Q22E41|Q22E41_TETTH Neurohypophysial hormones, N-terminal Dom... 33 9.3

>tr|Q2LWW4|Q2LWW4_SYNAS Sensor protein OS=Syntrophus aciditrophicus
(strain SB) GN=SYNAS_26940 PE=3 SV=1
Length = 503

Score = 35.4 bits (80), Expect = 1.4
Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 15/67 (22%)
Frame = +2

Query: 137 ELQPFNQKTRKNGTIVESFRAFDALPE---------------LPLSSPIVLKSKNCLLLQ 271
+L+ Q+T++ T++++ R LPE LPL P++ KSK LL+Q
Sbjct: 317 KLELILQQTQRLNTVIQNVRRATRLPEPHFESIPVQRLLDDTLPLVEPVIQKSKVELLVQ 376

Query: 272 SAPINPP 292
AP PP
Sbjct: 377 IAPDTPP 383


>tr|B6FFM1|B6FFM1_9ENTR Putative uncharacterized protein
OS=Enterobacter cancerogenus ATCC 35316 GN=ENTCAN_03552
PE=4 SV=1
Length = 320

Score = 34.3 bits (77), Expect = 3.1
Identities = 18/48 (37%), Positives = 26/48 (54%)
Frame = +2

Query: 182 VESFRAFDALPELPLSSPIVLKSKNCLLLQSAPINPPNNPQKWPKGIP 325
V +F D L + P+SSP LK +C+L+ S +N N WP +P
Sbjct: 172 VTAFATVDYLKKHPISSPQDLKDHSCILIDSMMVNDAN---IWPFRVP 216


>tr|Q1ZXJ5|Q1ZXJ5_DICDI Ankyrin repeat-containing protein
OS=Dictyostelium discoideum GN=DDB_0233217 PE=4 SV=1
Length = 1641

Score = 34.3 bits (77), Expect = 3.1
Identities = 22/58 (37%), Positives = 32/58 (55%)
Frame = +2

Query: 167 KNGTIVESFRAFDALPELPLSSPIVLKSKNCLLLQSAPINPPNNPQKWPKGIPKLIQN 340
+N ++SF + LSS +VLK KNC +L S IN PN + + K P +I+N
Sbjct: 1427 ENCNNLKSFGDLTIFKPIFLSSLVVLKFKNCKMLTSIFINAPNLEKLYVKNSP-IIEN 1483


>tr|Q8DLY5|Q8DLY5_THEEB Tlr0341 protein OS=Thermosynechococcus
elongatus (strain BP-1) GN=tlr0341 PE=4 SV=1
Length = 275

Score = 33.5 bits (75), Expect = 5.3
Identities = 19/65 (29%), Positives = 29/65 (44%), Gaps = 5/65 (7%)
Frame = +2

Query: 131 PSELQPFNQKT-----RKNGTIVESFRAFDALPELPLSSPIVLKSKNCLLLQSAPINPPN 295
P +P+ +T + N + E F A + P P S VL+ K L + P PP+
Sbjct: 7 PKRTEPYTIETCLTDVQANRLLDEVFAALETNPNEPESLAAVLEPKPSLPVPFEPTTPPS 66

Query: 296 NPQKW 310
P +W
Sbjct: 67 EPSRW 71


>tr|B0XAR8|B0XAR8_CULQU Predicted protein OS=Culex quinquefasciatus
GN=CpipJ_CPIJ015843 PE=4 SV=1
Length = 509

Score = 33.5 bits (75), Expect = 5.3
Identities = 14/23 (60%), Positives = 16/23 (69%)
Frame = -3

Query: 361 RTFLLRPILYQFGDPFWPFLGVI 293
R F L PIL+ DPFWP LGV+
Sbjct: 258 RMFALSPILFDSMDPFWPELGVL 280


>tr|A8CBG4|A8CBG4_TOXGO Pitrilysin-like stromal processing peptidase
(Fragment) OS=Toxoplasma gondii GN=SPP PE=2 SV=1
Length = 348

Score = 33.5 bits (75), Expect = 5.3
Identities = 26/69 (37%), Positives = 30/69 (43%), Gaps = 10/69 (14%)
Frame = +3

Query: 75 LQFFGLPFYNPVAYATMVCPPN---CNPSTRKLAKMEPLSSLFVLSMLF-------PSFP 224
+ FF L F P + VCPP+ C +KM PLS F LS L PS
Sbjct: 1 MSFFLLFFLPPQEFRVHVCPPSGPVCLSDHFSFSKMRPLSLFFRLSFLLFVLLFPSPSVD 60

Query: 225 CLLQLFSRA 251
LLQ S A
Sbjct: 61 ALLQSSSVA 69


>tr|A8CBG3|A8CBG3_TOXGO Delta-aminolevulinic acid dehydratase
OS=Toxoplasma gondii GN=HemB PE=2 SV=1
Length = 693

Score = 33.5 bits (75), Expect = 5.3
Identities = 26/69 (37%), Positives = 30/69 (43%), Gaps = 10/69 (14%)
Frame = +3

Query: 75 LQFFGLPFYNPVAYATMVCPPN---CNPSTRKLAKMEPLSSLFVLSMLF-------PSFP 224
+ FF L F P + VCPP+ C +KM PLS F LS L PS
Sbjct: 1 MSFFLLFFLPPQEFRVHVCPPSGPVCLSDHFSFSKMRPLSLFFRLSFLLFVLLFPSPSVD 60

Query: 225 CLLQLFSRA 251
LLQ S A
Sbjct: 61 ALLQSSSVA 69


>tr|A8CBF8|A8CBF8_TOXGO Delta-aminolevulinic acid dehydratase
OS=Toxoplasma gondii GN=HemB PE=2 SV=1
Length = 497

Score = 33.5 bits (75), Expect = 5.3
Identities = 26/69 (37%), Positives = 30/69 (43%), Gaps = 10/69 (14%)
Frame = +3

Query: 75 LQFFGLPFYNPVAYATMVCPPN---CNPSTRKLAKMEPLSSLFVLSMLF-------PSFP 224
+ FF L F P + VCPP+ C +KM PLS F LS L PS
Sbjct: 1 MSFFLLFFLPPQEFRVHVCPPSGPVCLSDHFSFSKMRPLSLFFRLSFLLFVLLFPSPSVD 60

Query: 225 CLLQLFSRA 251
LLQ S A
Sbjct: 61 ALLQSSSVA 69


>tr|B6AJU8|B6AJU8_9CRYT Putative uncharacterized protein
OS=Cryptosporidium muris RN66 GN=CMU_003190 PE=4 SV=1
Length = 660

Score = 33.1 bits (74), Expect = 7.0
Identities = 18/43 (41%), Positives = 24/43 (55%), Gaps = 5/43 (11%)
Frame = -2

Query: 167 CEFSG*---RVAIRRAYHCGICNRIVKG--QSEKLKLYHLTIE 54
CE G +V +++ HC ICN +K Q +KLYH TIE
Sbjct: 524 CEICGIIMKKVELKQHIHCNICNLGIKKELQDHHIKLYHTTIE 566


>tr|B0WRW1|B0WRW1_CULQU Predicted protein OS=Culex quinquefasciatus
GN=CpipJ_CPIJ009964 PE=4 SV=1
Length = 656

Score = 33.1 bits (74), Expect = 7.0
Identities = 14/23 (60%), Positives = 16/23 (69%)
Frame = -3

Query: 361 RTFLLRPILYQFGDPFWPFLGVI 293
R F L PIL+ DPFWP LGV+
Sbjct: 264 RMFALSPILFPSMDPFWPELGVL 286