BP921040
Clone id YMU001_000144_H01
Library
Length 455
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000144_H01.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
CCAGAAAGGTGGGTCCAAGAGAGATAAGGGGACCTATAATCAAAAACCCTGCAAGTAAAG
AAGCAAAGGACCCCACAGACTTTCTTGAACGCATGTACGTAGGGGCAGAAGCCCTTAAGT
TAAAAGAAGCTCAAGAGGCTAAAAAGAAAGCAAAAGGAGACACGGTCCAGCAAAAGACAA
GCGGAGGCTATGGAACAAATCGAGACACATCACGACCAAGGGGAGATGTCTCCAAAGCCC
ACCTCACCCCCTACGGTGCAGACAGACCATCCACCAATGCGAAGCTCAAGCCCTTCACCC
ACAGCTAGACCCAATGAGGGTGAGGAAACCAAGGAAACGAAGCAGGAACAACAGGCAGTA
GCCAGTTTTGAGCATTCAAAAGTGACAGAAACAGAGGCCACACCTTCTACGATCACCCAA
CAAGAAACAGTCGAAGCATCCACATAGCCTCAAGA
■■Homology search results ■■ -
sp_hit_id Q24705
Definition sp|Q24705|PDM2_DROVI POU domain protein 2 (Fragment) OS=Drosophila virilis
Align length 96
Score (bit) 34.3
E-value 0.26
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP921040|Adiantum capillus-veneris mRNA, clone:
YMU001_000144_H01.
(455 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q24705|PDM2_DROVI POU domain protein 2 (Fragment) OS=Drosophi... 34 0.26
sp|O75909|CCNK_HUMAN Cyclin-K OS=Homo sapiens GN=CCNK PE=1 SV=2 34 0.34
sp|A2AB59|RHG27_MOUSE Rho GTPase-activating protein 27 OS=Mus mu... 32 1.3
sp|P37370|VRP1_YEAST Verprolin OS=Saccharomyces cerevisiae GN=VR... 32 1.7
sp|P98088|MUC5A_HUMAN Mucin-5AC (Fragments) OS=Homo sapiens GN=M... 32 1.7
sp|Q9Y3X0|CCDC9_HUMAN Coiled-coil domain-containing protein 9 OS... 32 1.7
sp|Q5R1W5|SFRS2_PANTR Splicing factor, arginine/serine-rich 2 OS... 31 2.2
sp|Q6TLK4|RHG27_RAT Rho GTPase-activating protein 27 OS=Rattus n... 31 2.2
sp|P14780|MMP9_HUMAN Matrix metalloproteinase-9 OS=Homo sapiens ... 31 2.2
sp|P50282|MMP9_RAT Matrix metalloproteinase-9 OS=Rattus norvegic... 31 2.9
sp|P52176|MMP9_BOVIN Matrix metalloproteinase-9 OS=Bos taurus GN... 31 2.9
sp|Q9BZ68|FKS43_HUMAN Putative FERM domain-containing protein FK... 31 2.9
sp|P03395|ENV_MLVFR Envelope glycoprotein (Fragment) OS=Friend m... 31 2.9
sp|Q54PE1|Y6100_DICDI Putative uncharacterized protein DDB_G0284... 30 3.8
sp|Q0DJC7|SAP15_ORYSJ Zinc finger AN1 domain-containing stress-a... 30 3.8
sp|Q2JRR7|PCXA_SYNJA Proton extrusion protein pcxA OS=Synechococ... 30 3.8
sp|Q0CPW4|PAN1_ASPTN Actin cytoskeleton-regulatory complex prote... 30 3.8
sp|Q9ZT17|AGP3_ARATH Classical arabinogalactan protein 3 OS=Arab... 30 3.8
sp|Q6S6W0|VGLX_EHV1V Glycoprotein X OS=Equine herpesvirus 1 (str... 30 4.9
sp|P28968|VGLX_EHV1B Glycoprotein X OS=Equine herpesvirus 1 (str... 30 4.9
sp|Q68EM7|RHG17_HUMAN Rho GTPase-activating protein 17 OS=Homo s... 30 4.9
sp|Q54MH9|RFC1_DICDI Probable replication factor C subunit 1 OS=... 30 4.9
sp|Q9S740|AGP19_ARATH Lysine-rich arabinogalactan protein 19 OS=... 30 4.9
sp|P57999|ZAN_RABIT Zonadhesin (Fragment) OS=Oryctolagus cunicul... 30 6.4
sp|P24152|EXTN_SORBI Extensin OS=Sorghum bicolor GN=HRGP PE=3 SV=1 30 6.4
sp|A7KAM0|ATG9_PENCH Autophagy-related protein 9 OS=Penicillium ... 30 6.4
sp|P41479|Y091_NPVAC Uncharacterized 24.1 kDa protein in LEF4-P3... 29 8.4
sp|P22856|VL96_IRV1 L96 protein OS=Tipula iridescent virus GN=L9... 29 8.4
sp|P10227|UL43_HHV11 Membrane protein UL43 OS=Human herpesvirus ... 29 8.4
sp|Q92545|TM131_HUMAN Transmembrane protein 131 OS=Homo sapiens ... 29 8.4

>sp|Q24705|PDM2_DROVI POU domain protein 2 (Fragment) OS=Drosophila
virilis GN=pdm2 PE=2 SV=1
Length = 471

Score = 34.3 bits (77), Expect = 0.26
Identities = 29/96 (30%), Positives = 38/96 (39%), Gaps = 7/96 (7%)
Frame = +1

Query: 178 QAEAMEQIETHHDQGEMSPKPTSPPTVQTDH-------PPMRSSSPSPTARPNEGXXXXX 336
Q +A++Q++ DQ PT+ + T H P+RS S SP AR E
Sbjct: 137 QFQALQQLKQQRDQ----QLPTASEQLPTRHYSTPLSKSPLRSPSLSPVARSMEPQQAQR 192

Query: 337 XXXXXXAVASFEHSKVTETEATPSTITQQETVEAST 444
A A S T TPS QQ+ ST
Sbjct: 193 TPPNSLAAAGLGLSSAVLTPNTPSMQQQQQQTMTST 228


>sp|O75909|CCNK_HUMAN Cyclin-K OS=Homo sapiens GN=CCNK PE=1 SV=2
Length = 580

Score = 33.9 bits (76), Expect = 0.34
Identities = 14/49 (28%), Positives = 22/49 (44%)
Frame = +1

Query: 166 SSKRQAEAMEQIETHHDQGEMSPKPTSPPTVQTDHPPMRSSSPSPTARP 312
SS RQ + + + P P P ++T HPP+ + P P +P
Sbjct: 328 SSPRQVKRAVVVSPKEENKAAEPPPPKIPKIETTHPPLPPAHPPPDRKP 376


>sp|A2AB59|RHG27_MOUSE Rho GTPase-activating protein 27 OS=Mus
musculus GN=Arhgap27 PE=1 SV=1
Length = 869

Score = 32.0 bits (71), Expect = 1.3
Identities = 15/52 (28%), Positives = 24/52 (46%)
Frame = +1

Query: 157 ETRSSKRQAEAMEQIETHHDQGEMSPKPTSPPTVQTDHPPMRSSSPSPTARP 312
E + + + + EQ+E SP PPT +TD+P + +S P P
Sbjct: 329 EDETEELEEDHQEQLEMQPSLSPRSPGQQRPPTPETDYPELLASYPEEDYSP 380


>sp|P37370|VRP1_YEAST Verprolin OS=Saccharomyces cerevisiae GN=VRP1
PE=1 SV=2
Length = 817

Score = 31.6 bits (70), Expect = 1.7
Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 4/55 (7%)
Frame = +1

Query: 163 RSSKRQAEAME--QIET-HHDQGEMSPKPTSPPTVQTDH-PPMRSSSPSPTARPN 315
RS + E + +I+T +H P P+S P + T H PP+ ++P P + PN
Sbjct: 283 RSERGAVEGVSSTKIQTENHKSPSQPPLPSSAPPIPTSHAPPLPPTAPPPPSLPN 337


>sp|P98088|MUC5A_HUMAN Mucin-5AC (Fragments) OS=Homo sapiens GN=MUC5AC
PE=1 SV=3
Length = 5030

Score = 31.6 bits (70), Expect = 1.7
Identities = 21/72 (29%), Positives = 30/72 (41%)
Frame = +1

Query: 229 SPKPTSPPTVQTDHPPMRSSSPSPTARPNEGXXXXXXXXXXXAVASFEHSKVTETEATPS 408
+P TS PT T P S++ +PT R G + S + T T + P+
Sbjct: 3542 TPSTTSAPTTSTTSAPTTSTTSAPTHRTTSGPTTSTTLAPTTSTTS---APTTSTNSAPT 3598

Query: 409 TITQQETVEAST 444
T T+ AST
Sbjct: 3599 T----STISAST 3606


>sp|Q9Y3X0|CCDC9_HUMAN Coiled-coil domain-containing protein 9
OS=Homo sapiens GN=CCDC9 PE=1 SV=1
Length = 531

Score = 31.6 bits (70), Expect = 1.7
Identities = 21/63 (33%), Positives = 30/63 (47%), Gaps = 11/63 (17%)
Frame = +1

Query: 163 RSSKRQAEAMEQIETHHD------QGEMSP-----KPTSPPTVQTDHPPMRSSSPSPTAR 309
+SS+ QA+A + + HD +G SP +PTSP T + P P+P R
Sbjct: 348 KSSRPQAKAAPRAYSDHDDRWETKEGAASPAPETPQPTSPETSPKETPMQPPEIPAPAHR 407

Query: 310 PNE 318
P E
Sbjct: 408 PPE 410


>sp|Q5R1W5|SFRS2_PANTR Splicing factor, arginine/serine-rich 2
OS=Pan troglodytes GN=SFRS2 PE=2 SV=3
Length = 221

Score = 31.2 bits (69), Expect = 2.2
Identities = 15/54 (27%), Positives = 22/54 (40%)
Frame = +1

Query: 157 ETRSSKRQAEAMEQIETHHDQGEMSPKPTSPPTVQTDHPPMRSSSPSPTARPNE 318
++RS++R + + + SPP V P RS S SP P E
Sbjct: 162 KSRSARRSKSKSSSVSRSRSRSRSRSRSRSPPPVSKREPKSRSRSKSPPESPEE 215


>sp|Q6TLK4|RHG27_RAT Rho GTPase-activating protein 27 OS=Rattus
norvegicus GN=Arhgap27 PE=1 SV=1
Length = 869

Score = 31.2 bits (69), Expect = 2.2
Identities = 15/52 (28%), Positives = 24/52 (46%)
Frame = +1

Query: 157 ETRSSKRQAEAMEQIETHHDQGEMSPKPTSPPTVQTDHPPMRSSSPSPTARP 312
E + + + + EQ+E SP PPT +TD+P + +S P P
Sbjct: 329 EDETEELEDDPEEQLEMQPSLSPRSPGQQRPPTPETDYPELLTSYPEEDYSP 380


>sp|P14780|MMP9_HUMAN Matrix metalloproteinase-9 OS=Homo sapiens
GN=MMP9 PE=1 SV=2
Length = 707

Score = 31.2 bits (69), Expect = 2.2
Identities = 14/28 (50%), Positives = 17/28 (60%)
Frame = +1

Query: 229 SPKPTSPPTVQTDHPPMRSSSPSPTARP 312
+P+PT+PPTV PP S PTA P
Sbjct: 458 TPQPTAPPTVCPTGPPTVHPSERPTAGP 485


>sp|P50282|MMP9_RAT Matrix metalloproteinase-9 OS=Rattus norvegicus
GN=Mmp9 PE=2 SV=1
Length = 708

Score = 30.8 bits (68), Expect = 2.9
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +1

Query: 232 PKPTSPPTVQTDHPPMRSSSPSPTARP 312
P+PT+PPT+ + PPM + PT P
Sbjct: 462 PQPTAPPTMCSTAPPMAYPTGGPTVAP 488


tr_hit_id B8C3A9
Definition tr|B8C3A9|B8C3A9_THAPS Predicted protein OS=Thalassiosira pseudonana CCMP1335
Align length 101
Score (bit) 38.5
E-value 0.17
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP921040|Adiantum capillus-veneris mRNA, clone:
YMU001_000144_H01.
(455 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|B8C3A9|B8C3A9_THAPS Predicted protein OS=Thalassiosira pseudo... 39 0.17
tr|B7Q1X3|B7Q1X3_IXOSC Putative uncharacterized protein OS=Ixode... 38 0.29
tr|Q3JL44|Q3JL44_BURP1 Putative membrane protein OS=Burkholderia... 36 1.1
tr|A7UYY6|A7UYY6_BACUN Putative uncharacterized protein OS=Bacte... 35 1.4
tr|Q54YM3|Q54YM3_DICDI Putative uncharacterized protein OS=Dicty... 35 1.4
tr|Q5KIX7|Q5KIX7_CRYNE Putative uncharacterized protein OS=Crypt... 35 1.9
tr|B8P5K1|B8P5K1_9APHY Predicted protein OS=Postia placenta Mad-... 35 1.9
tr|B0E0H9|B0E0H9_LACBS Predicted protein OS=Laccaria bicolor (st... 35 1.9
tr|Q07PP9|Q07PP9_RHOP5 AsmA family protein OS=Rhodopseudomonas p... 35 2.4
tr|B8C4R8|B8C4R8_THAPS Predicted protein OS=Thalassiosira pseudo... 35 2.4
tr|A4HKR8|A4HKR8_LEIBR Putative uncharacterized protein OS=Leish... 35 2.4
tr|A2F543|A2F543_TRIVA Putative uncharacterized protein OS=Trich... 35 2.4
tr|Q0CQF4|Q0CQF4_ASPTN Predicted protein OS=Aspergillus terreus ... 35 2.4
tr|A3NLB4|A3NLB4_BURP6 Putative uncharacterized protein OS=Burkh... 34 3.2
tr|B4MDL5|B4MDL5_DROVI POU domain protein 2 OS=Drosophila virili... 34 3.2
tr|Q8YQJ7|Q8YQJ7_ANASP All3826 protein OS=Anabaena sp. (strain P... 34 4.2
tr|Q63K53|Q63K53_BURPS Putative membrane protein OS=Burkholderia... 34 4.2
tr|Q4V2Q6|Q4V2Q6_BURMA Putative uncharacterized protein (TssM) O... 34 4.2
tr|A9AZT3|A9AZT3_HERA2 PT repeat-containing protein OS=Herpetosi... 34 4.2
tr|A1UW77|A1UW77_BURMS Putative uncharacterized protein OS=Burkh... 34 4.2
tr|B7CYW5|B7CYW5_BURPS Putative uncharacterized protein OS=Burkh... 34 4.2
tr|Q29MB7|Q29MB7_DROPS GA20095 OS=Drosophila pseudoobscura pseud... 34 4.2
tr|B4G9H2|B4G9H2_DROPE GL19481 OS=Drosophila persimilis GN=GL194... 34 4.2
tr|B3M6C2|B3M6C2_DROAN GF24314 OS=Drosophila ananassae GN=GF2431... 34 4.2
tr|A2ELB7|A2ELB7_TRIVA Putative uncharacterized protein OS=Trich... 34 4.2
tr|Q47TA2|Q47TA2_THEFY Surface protein from Gram-positive cocci,... 33 5.4
tr|B2J3M1|B2J3M1_NOSP7 Heat shock protein DnaJ domain protein OS... 33 5.4
tr|Q07894|Q07894_NICAL Proline-rich protein OS=Nicotiana alata G... 33 5.4
tr|Q4DZ43|Q4DZ43_TRYCR Mucin-associated surface protein (MASP), ... 33 5.4
tr|Q18650|Q18650_CAEEL Putative uncharacterized protein OS=Caeno... 33 5.4

>tr|B8C3A9|B8C3A9_THAPS Predicted protein OS=Thalassiosira
pseudonana CCMP1335 GN=THAPSDRAFT_5580 PE=4 SV=1
Length = 483

Score = 38.5 bits (88), Expect = 0.17
Identities = 31/101 (30%), Positives = 46/101 (45%), Gaps = 8/101 (7%)
Frame = +1

Query: 163 RSSKRQAEAMEQIETHHD----QGEMSP----KPTSPPTVQTDHPPMRSSSPSPTARPNE 318
+ KRQ + E +ET D +G ++ KPT+ PTV T P + SP+PT +PN+
Sbjct: 89 KQEKRQ-QTNEDVETIEDTEPARGPLTSVVRTKPTASPTV-TASPTTLAPSPAPTMKPNK 146

Query: 319 GXXXXXXXXXXXAVASFEHSKVTETEATPSTITQQETVEAS 441
S S + T+ATP T T E++
Sbjct: 147 PTVSPTKVSSGNPTQSPVKSTIAPTKATPPPTTNAPTKEST 187


>tr|B7Q1X3|B7Q1X3_IXOSC Putative uncharacterized protein OS=Ixodes
scapularis GN=IscW_ISCW009254 PE=4 SV=1
Length = 463

Score = 37.7 bits (86), Expect = 0.29
Identities = 24/82 (29%), Positives = 37/82 (45%)
Frame = +1

Query: 190 MEQIETHHDQGEMSPKPTSPPTVQTDHPPMRSSSPSPTARPNEGXXXXXXXXXXXAVASF 369
+EQ++ DQG+ K +SP T+QT PMR T VA++
Sbjct: 346 LEQVKPDSDQGKEEVKISSPETLQTSQRPMRVEEIDSTT--------DVVSSKTEKVATY 397

Query: 370 EHSKVTETEATPSTITQQETVE 435
E++ VT TE +Q ++E
Sbjct: 398 ENASVTSTEVNQVVKKKQSSLE 419


>tr|Q3JL44|Q3JL44_BURP1 Putative membrane protein OS=Burkholderia
pseudomallei (strain 1710b) GN=BURPS1710b_A0550 PE=4
SV=1
Length = 646

Score = 35.8 bits (81), Expect = 1.1
Identities = 25/78 (32%), Positives = 35/78 (44%), Gaps = 2/78 (2%)
Frame = +1

Query: 214 DQGEMSPKPTSPPTVQTDHPPMRSS--SPSPTARPNEGXXXXXXXXXXXAVASFEHSKVT 387
D GE +P+ +PPTVQ +P +S +P+PTA + G AS +
Sbjct: 256 DSGEPAPREFAPPTVQLAYPTQPNSPVAPAPTAHVSSGHTPPATAPAAMPTASPTATPTA 315

Query: 388 ETEATPSTITQQETVEAS 441
ATP T + T AS
Sbjct: 316 SPTATP-TASPTATAAAS 332


>tr|A7UYY6|A7UYY6_BACUN Putative uncharacterized protein
OS=Bacteroides uniformis ATCC 8492 GN=BACUNI_00512 PE=4
SV=1
Length = 126

Score = 35.4 bits (80), Expect = 1.4
Identities = 13/29 (44%), Positives = 20/29 (68%)
Frame = +1

Query: 232 PKPTSPPTVQTDHPPMRSSSPSPTARPNE 318
PKP S P+ ++ H +++S PSP +RP E
Sbjct: 68 PKPVSKPSAKSKHTSIKASPPSPASRPQE 96


>tr|Q54YM3|Q54YM3_DICDI Putative uncharacterized protein
OS=Dictyostelium discoideum GN=DDB_0204475 PE=4 SV=2
Length = 915

Score = 35.4 bits (80), Expect = 1.4
Identities = 19/54 (35%), Positives = 27/54 (50%)
Frame = +1

Query: 157 ETRSSKRQAEAMEQIETHHDQGEMSPKPTSPPTVQTDHPPMRSSSPSPTARPNE 318
ET S + ++T + E S KPT PPT T P +SPSP+ +P +
Sbjct: 726 ETESPIKLRPTHRPLKTQSPETE-STKPTKPPTTTTPKPTKPPTSPSPSPKPTK 778


>tr|Q5KIX7|Q5KIX7_CRYNE Putative uncharacterized protein
OS=Cryptococcus neoformans GN=CNBD4930 PE=4 SV=1
Length = 482

Score = 35.0 bits (79), Expect = 1.9
Identities = 27/101 (26%), Positives = 45/101 (44%), Gaps = 8/101 (7%)
Frame = +1

Query: 166 SSKRQAEAMEQIETHHDQGEMSPKPTSPPTVQTDHPPMRSSSPSPTARPNEGXXXXXXXX 345
+S +E++ + +Q SP P++ + P S SPS +A+ ++
Sbjct: 42 ASPSASESVTASPSPSEQASSSPSPSASASPSASASPSASESPSQSAQQSQSASSSPSDT 101

Query: 346 XXXAVAS-----FEHSKVTETEAT---PSTITQQETVEAST 444
A +S S VTE+E + PS+ TQ VE+ST
Sbjct: 102 SSAAPSSSAAPTSNPSSVTESETSSQIPSSTTQSSGVESST 142


>tr|B8P5K1|B8P5K1_9APHY Predicted protein OS=Postia placenta
Mad-698-R GN=POSPLDRAFT_102986 PE=4 SV=1
Length = 1119

Score = 35.0 bits (79), Expect = 1.9
Identities = 14/28 (50%), Positives = 17/28 (60%)
Frame = +1

Query: 229 SPKPTSPPTVQTDHPPMRSSSPSPTARP 312
SP P SPPT T HP + S+ P+P P
Sbjct: 435 SPAPPSPPTQSTSHPIITSAPPAPPVHP 462



Score = 35.0 bits (79), Expect = 1.9
Identities = 14/28 (50%), Positives = 17/28 (60%)
Frame = +1

Query: 229 SPKPTSPPTVQTDHPPMRSSSPSPTARP 312
SP P SPPT T HP + S+ P+P P
Sbjct: 912 SPAPPSPPTQSTSHPIITSAPPAPPVHP 939


>tr|B0E0H9|B0E0H9_LACBS Predicted protein OS=Laccaria bicolor
(strain S238N-H82) GN=LACBIDRAFT_316234 PE=4 SV=1
Length = 237

Score = 35.0 bits (79), Expect = 1.9
Identities = 24/88 (27%), Positives = 31/88 (35%), Gaps = 4/88 (4%)
Frame = +1

Query: 199 IETHHDQGEMSPKPTSPPTVQT----DHPPMRSSSPSPTARPNEGXXXXXXXXXXXAVAS 366
+ +HH Q + P PTSPPT H P+ P+ N VA+
Sbjct: 37 LSSHHHQPLLPPPPTSPPTTTNLSSHHHQPLLPPPPTSLLLINARLLPTHATSPWSPVAT 96

Query: 367 FEHSKVTETEATPSTITQQETVEAST*P 450
H T ST T+Q V P
Sbjct: 97 TAHKACQPPTTTTSTTTRQRHVSKQMIP 124


>tr|Q07PP9|Q07PP9_RHOP5 AsmA family protein OS=Rhodopseudomonas
palustris (strain BisA53) GN=RPE_2141 PE=3 SV=1
Length = 1188

Score = 34.7 bits (78), Expect = 2.4
Identities = 20/54 (37%), Positives = 29/54 (53%)
Frame = +1

Query: 160 TRSSKRQAEAMEQIETHHDQGEMSPKPTSPPTVQTDHPPMRSSSPSPTARPNEG 321
TR + + ++ IE + P+P PPT +D PP+ +S PSPT P EG
Sbjct: 1089 TRRIDSEIQRLQTIEQSETPTLVPPQPLGPPTEVSD-PPV-ASIPSPTRDPREG 1140


>tr|B8C4R8|B8C4R8_THAPS Predicted protein OS=Thalassiosira pseudonana
CCMP1335 GN=THAPSDRAFT_6591 PE=4 SV=1
Length = 2352

Score = 34.7 bits (78), Expect = 2.4
Identities = 27/78 (34%), Positives = 34/78 (43%)
Frame = +1

Query: 178 QAEAMEQIETHHDQGEMSPKPTSPPTVQTDHPPMRSSSPSPTARPNEGXXXXXXXXXXXA 357
Q +M ETH S +P+S PTV + P MR PS T P+E
Sbjct: 2079 QTPSMRPSETHSPSEMRSSEPSSQPTVTSQTPSMR---PSETHSPSE------------M 2123

Query: 358 VASFEHSKVTETEATPST 411
+S S+ T T TPST
Sbjct: 2124 RSSEPSSQPTVTSQTPST 2141



Score = 33.1 bits (74), Expect = 7.1
Identities = 19/47 (40%), Positives = 24/47 (51%)
Frame = +1

Query: 178 QAEAMEQIETHHDQGEMSPKPTSPPTVQTDHPPMRSSSPSPTARPNE 318
Q +M ETH S +P+S PTV + P MR PS T P+E
Sbjct: 2050 QTPSMRPSETHSPSEMRSSEPSSQPTVTSQTPSMR---PSETHSPSE 2093