BP921040 |
Clone id |
YMU001_000144_H01 |
Library |
YMU01 |
Length |
455 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000144_H01. |
Accession |
BP921040 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL3804Contig1 |
Sequence |
CCAGAAAGGTGGGTCCAAGAGAGATAAGGGGACCTATAATCAAAAACCCTGCAAGTAAAG AAGCAAAGGACCCCACAGACTTTCTTGAACGCATGTACGTAGGGGCAGAAGCCCTTAAGT TAAAAGAAGCTCAAGAGGCTAAAAAGAAAGCAAAAGGAGACACGGTCCAGCAAAAGACAA GCGGAGGCTATGGAACAAATCGAGACACATCACGACCAAGGGGAGATGTCTCCAAAGCCC ACCTCACCCCCTACGGTGCAGACAGACCATCCACCAATGCGAAGCTCAAGCCCTTCACCC ACAGCTAGACCCAATGAGGGTGAGGAAACCAAGGAAACGAAGCAGGAACAACAGGCAGTA GCCAGTTTTGAGCATTCAAAAGTGACAGAAACAGAGGCCACACCTTCTACGATCACCCAA CAAGAAACAGTCGAAGCATCCACATAGCCTCAAGA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q24705 |
Definition |
sp|Q24705|PDM2_DROVI POU domain protein 2 (Fragment) OS=Drosophila virilis |
Align length |
96 |
Score (bit) |
34.3 |
E-value |
0.26 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
B8C3A9 |
Definition |
tr|B8C3A9|B8C3A9_THAPS Predicted protein OS=Thalassiosira pseudonana CCMP1335 |
Align length |
101 |
Score (bit) |
38.5 |
E-value |
0.17 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP921040|Adiantum capillus-veneris mRNA, clone: YMU001_000144_H01. (455 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|B8C3A9|B8C3A9_THAPS Predicted protein OS=Thalassiosira pseudo... 39 0.17 tr|B7Q1X3|B7Q1X3_IXOSC Putative uncharacterized protein OS=Ixode... 38 0.29 tr|Q3JL44|Q3JL44_BURP1 Putative membrane protein OS=Burkholderia... 36 1.1 tr|A7UYY6|A7UYY6_BACUN Putative uncharacterized protein OS=Bacte... 35 1.4 tr|Q54YM3|Q54YM3_DICDI Putative uncharacterized protein OS=Dicty... 35 1.4 tr|Q5KIX7|Q5KIX7_CRYNE Putative uncharacterized protein OS=Crypt... 35 1.9 tr|B8P5K1|B8P5K1_9APHY Predicted protein OS=Postia placenta Mad-... 35 1.9 tr|B0E0H9|B0E0H9_LACBS Predicted protein OS=Laccaria bicolor (st... 35 1.9 tr|Q07PP9|Q07PP9_RHOP5 AsmA family protein OS=Rhodopseudomonas p... 35 2.4 tr|B8C4R8|B8C4R8_THAPS Predicted protein OS=Thalassiosira pseudo... 35 2.4 tr|A4HKR8|A4HKR8_LEIBR Putative uncharacterized protein OS=Leish... 35 2.4 tr|A2F543|A2F543_TRIVA Putative uncharacterized protein OS=Trich... 35 2.4 tr|Q0CQF4|Q0CQF4_ASPTN Predicted protein OS=Aspergillus terreus ... 35 2.4 tr|A3NLB4|A3NLB4_BURP6 Putative uncharacterized protein OS=Burkh... 34 3.2 tr|B4MDL5|B4MDL5_DROVI POU domain protein 2 OS=Drosophila virili... 34 3.2 tr|Q8YQJ7|Q8YQJ7_ANASP All3826 protein OS=Anabaena sp. (strain P... 34 4.2 tr|Q63K53|Q63K53_BURPS Putative membrane protein OS=Burkholderia... 34 4.2 tr|Q4V2Q6|Q4V2Q6_BURMA Putative uncharacterized protein (TssM) O... 34 4.2 tr|A9AZT3|A9AZT3_HERA2 PT repeat-containing protein OS=Herpetosi... 34 4.2 tr|A1UW77|A1UW77_BURMS Putative uncharacterized protein OS=Burkh... 34 4.2 tr|B7CYW5|B7CYW5_BURPS Putative uncharacterized protein OS=Burkh... 34 4.2 tr|Q29MB7|Q29MB7_DROPS GA20095 OS=Drosophila pseudoobscura pseud... 34 4.2 tr|B4G9H2|B4G9H2_DROPE GL19481 OS=Drosophila persimilis GN=GL194... 34 4.2 tr|B3M6C2|B3M6C2_DROAN GF24314 OS=Drosophila ananassae GN=GF2431... 34 4.2 tr|A2ELB7|A2ELB7_TRIVA Putative uncharacterized protein OS=Trich... 34 4.2 tr|Q47TA2|Q47TA2_THEFY Surface protein from Gram-positive cocci,... 33 5.4 tr|B2J3M1|B2J3M1_NOSP7 Heat shock protein DnaJ domain protein OS... 33 5.4 tr|Q07894|Q07894_NICAL Proline-rich protein OS=Nicotiana alata G... 33 5.4 tr|Q4DZ43|Q4DZ43_TRYCR Mucin-associated surface protein (MASP), ... 33 5.4 tr|Q18650|Q18650_CAEEL Putative uncharacterized protein OS=Caeno... 33 5.4
>tr|B8C3A9|B8C3A9_THAPS Predicted protein OS=Thalassiosira pseudonana CCMP1335 GN=THAPSDRAFT_5580 PE=4 SV=1 Length = 483
Score = 38.5 bits (88), Expect = 0.17 Identities = 31/101 (30%), Positives = 46/101 (45%), Gaps = 8/101 (7%) Frame = +1
Query: 163 RSSKRQAEAMEQIETHHD----QGEMSP----KPTSPPTVQTDHPPMRSSSPSPTARPNE 318 + KRQ + E +ET D +G ++ KPT+ PTV T P + SP+PT +PN+ Sbjct: 89 KQEKRQ-QTNEDVETIEDTEPARGPLTSVVRTKPTASPTV-TASPTTLAPSPAPTMKPNK 146
Query: 319 GXXXXXXXXXXXAVASFEHSKVTETEATPSTITQQETVEAS 441 S S + T+ATP T T E++ Sbjct: 147 PTVSPTKVSSGNPTQSPVKSTIAPTKATPPPTTNAPTKEST 187
>tr|B7Q1X3|B7Q1X3_IXOSC Putative uncharacterized protein OS=Ixodes scapularis GN=IscW_ISCW009254 PE=4 SV=1 Length = 463
Score = 37.7 bits (86), Expect = 0.29 Identities = 24/82 (29%), Positives = 37/82 (45%) Frame = +1
Query: 190 MEQIETHHDQGEMSPKPTSPPTVQTDHPPMRSSSPSPTARPNEGXXXXXXXXXXXAVASF 369 +EQ++ DQG+ K +SP T+QT PMR T VA++ Sbjct: 346 LEQVKPDSDQGKEEVKISSPETLQTSQRPMRVEEIDSTT--------DVVSSKTEKVATY 397
Query: 370 EHSKVTETEATPSTITQQETVE 435 E++ VT TE +Q ++E Sbjct: 398 ENASVTSTEVNQVVKKKQSSLE 419
>tr|Q3JL44|Q3JL44_BURP1 Putative membrane protein OS=Burkholderia pseudomallei (strain 1710b) GN=BURPS1710b_A0550 PE=4 SV=1 Length = 646
Score = 35.8 bits (81), Expect = 1.1 Identities = 25/78 (32%), Positives = 35/78 (44%), Gaps = 2/78 (2%) Frame = +1
Query: 214 DQGEMSPKPTSPPTVQTDHPPMRSS--SPSPTARPNEGXXXXXXXXXXXAVASFEHSKVT 387 D GE +P+ +PPTVQ +P +S +P+PTA + G AS + Sbjct: 256 DSGEPAPREFAPPTVQLAYPTQPNSPVAPAPTAHVSSGHTPPATAPAAMPTASPTATPTA 315
Query: 388 ETEATPSTITQQETVEAS 441 ATP T + T AS Sbjct: 316 SPTATP-TASPTATAAAS 332
>tr|A7UYY6|A7UYY6_BACUN Putative uncharacterized protein OS=Bacteroides uniformis ATCC 8492 GN=BACUNI_00512 PE=4 SV=1 Length = 126
Score = 35.4 bits (80), Expect = 1.4 Identities = 13/29 (44%), Positives = 20/29 (68%) Frame = +1
Query: 232 PKPTSPPTVQTDHPPMRSSSPSPTARPNE 318 PKP S P+ ++ H +++S PSP +RP E Sbjct: 68 PKPVSKPSAKSKHTSIKASPPSPASRPQE 96
>tr|Q54YM3|Q54YM3_DICDI Putative uncharacterized protein OS=Dictyostelium discoideum GN=DDB_0204475 PE=4 SV=2 Length = 915
Score = 35.4 bits (80), Expect = 1.4 Identities = 19/54 (35%), Positives = 27/54 (50%) Frame = +1
Query: 157 ETRSSKRQAEAMEQIETHHDQGEMSPKPTSPPTVQTDHPPMRSSSPSPTARPNE 318 ET S + ++T + E S KPT PPT T P +SPSP+ +P + Sbjct: 726 ETESPIKLRPTHRPLKTQSPETE-STKPTKPPTTTTPKPTKPPTSPSPSPKPTK 778
>tr|Q5KIX7|Q5KIX7_CRYNE Putative uncharacterized protein OS=Cryptococcus neoformans GN=CNBD4930 PE=4 SV=1 Length = 482
Score = 35.0 bits (79), Expect = 1.9 Identities = 27/101 (26%), Positives = 45/101 (44%), Gaps = 8/101 (7%) Frame = +1
Query: 166 SSKRQAEAMEQIETHHDQGEMSPKPTSPPTVQTDHPPMRSSSPSPTARPNEGXXXXXXXX 345 +S +E++ + +Q SP P++ + P S SPS +A+ ++ Sbjct: 42 ASPSASESVTASPSPSEQASSSPSPSASASPSASASPSASESPSQSAQQSQSASSSPSDT 101
Query: 346 XXXAVAS-----FEHSKVTETEAT---PSTITQQETVEAST 444 A +S S VTE+E + PS+ TQ VE+ST Sbjct: 102 SSAAPSSSAAPTSNPSSVTESETSSQIPSSTTQSSGVESST 142
>tr|B8P5K1|B8P5K1_9APHY Predicted protein OS=Postia placenta Mad-698-R GN=POSPLDRAFT_102986 PE=4 SV=1 Length = 1119
Score = 35.0 bits (79), Expect = 1.9 Identities = 14/28 (50%), Positives = 17/28 (60%) Frame = +1
Query: 229 SPKPTSPPTVQTDHPPMRSSSPSPTARP 312 SP P SPPT T HP + S+ P+P P Sbjct: 435 SPAPPSPPTQSTSHPIITSAPPAPPVHP 462
Score = 35.0 bits (79), Expect = 1.9 Identities = 14/28 (50%), Positives = 17/28 (60%) Frame = +1
Query: 229 SPKPTSPPTVQTDHPPMRSSSPSPTARP 312 SP P SPPT T HP + S+ P+P P Sbjct: 912 SPAPPSPPTQSTSHPIITSAPPAPPVHP 939
>tr|B0E0H9|B0E0H9_LACBS Predicted protein OS=Laccaria bicolor (strain S238N-H82) GN=LACBIDRAFT_316234 PE=4 SV=1 Length = 237
Score = 35.0 bits (79), Expect = 1.9 Identities = 24/88 (27%), Positives = 31/88 (35%), Gaps = 4/88 (4%) Frame = +1
Query: 199 IETHHDQGEMSPKPTSPPTVQT----DHPPMRSSSPSPTARPNEGXXXXXXXXXXXAVAS 366 + +HH Q + P PTSPPT H P+ P+ N VA+ Sbjct: 37 LSSHHHQPLLPPPPTSPPTTTNLSSHHHQPLLPPPPTSLLLINARLLPTHATSPWSPVAT 96
Query: 367 FEHSKVTETEATPSTITQQETVEAST*P 450 H T ST T+Q V P Sbjct: 97 TAHKACQPPTTTTSTTTRQRHVSKQMIP 124
>tr|Q07PP9|Q07PP9_RHOP5 AsmA family protein OS=Rhodopseudomonas palustris (strain BisA53) GN=RPE_2141 PE=3 SV=1 Length = 1188
Score = 34.7 bits (78), Expect = 2.4 Identities = 20/54 (37%), Positives = 29/54 (53%) Frame = +1
Query: 160 TRSSKRQAEAMEQIETHHDQGEMSPKPTSPPTVQTDHPPMRSSSPSPTARPNEG 321 TR + + ++ IE + P+P PPT +D PP+ +S PSPT P EG Sbjct: 1089 TRRIDSEIQRLQTIEQSETPTLVPPQPLGPPTEVSD-PPV-ASIPSPTRDPREG 1140
>tr|B8C4R8|B8C4R8_THAPS Predicted protein OS=Thalassiosira pseudonana CCMP1335 GN=THAPSDRAFT_6591 PE=4 SV=1 Length = 2352
Score = 34.7 bits (78), Expect = 2.4 Identities = 27/78 (34%), Positives = 34/78 (43%) Frame = +1
Query: 178 QAEAMEQIETHHDQGEMSPKPTSPPTVQTDHPPMRSSSPSPTARPNEGXXXXXXXXXXXA 357 Q +M ETH S +P+S PTV + P MR PS T P+E Sbjct: 2079 QTPSMRPSETHSPSEMRSSEPSSQPTVTSQTPSMR---PSETHSPSE------------M 2123
Query: 358 VASFEHSKVTETEATPST 411 +S S+ T T TPST Sbjct: 2124 RSSEPSSQPTVTSQTPST 2141
Score = 33.1 bits (74), Expect = 7.1 Identities = 19/47 (40%), Positives = 24/47 (51%) Frame = +1
Query: 178 QAEAMEQIETHHDQGEMSPKPTSPPTVQTDHPPMRSSSPSPTARPNE 318 Q +M ETH S +P+S PTV + P MR PS T P+E Sbjct: 2050 QTPSMRPSETHSPSEMRSSEPSSQPTVTSQTPSMR---PSETHSPSE 2093
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