BP921044
Clone id YMU001_000144_H05
Library
Length 390
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000144_H05.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
TTCAAATGTCAATAGTTGCGCATAAAGATTGGTTCCCAATATTCCTTGACAAAACCAAAC
ATCCTATCTTGAGCTCCCAATAAAAATTCATTTAGTTGCGCATAAAGATTGCCTCCCAAT
ACTCCTCGACAAAAACTTGGAAGAGTTGCAAAACTTGCAAATTCAGTATTCCCTCAGAAC
AAATGTCTCTAACTTAAACCCCCCAAAATTGAGCTCAGGCAGATCAACTAAACCAAGGCT
GATTGATAGCAAGTAAGCACATCGTCCATGCTTTTGAACCTAAAGCTTCATTCCCCAGAC
AGCCTGACAATTCCTCAAACACGAAATGGGCAGCAGTCCTGCCATCTTGTGCACAGAACC
AACTTGTCAACTGCTGCTGATAACATGAAA
■■Homology search results ■■ -
sp_hit_id A2AQW0
Definition sp|A2AQW0|M3K15_MOUSE Mitogen-activated protein kinase kinase kinase 15 OS=Mus musculus
Align length 49
Score (bit) 31.6
E-value 1.3
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP921044|Adiantum capillus-veneris mRNA, clone:
YMU001_000144_H05.
(369 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|A2AQW0|M3K15_MOUSE Mitogen-activated protein kinase kinase ki... 32 1.3
sp|P83636|MIH_ORCLI Molt-inhibiting hormone OS=Orconectes limosu... 31 2.2
sp|O36041|IF2G_SPIVO Eukaryotic translation initiation factor 2 ... 30 3.7
sp|O49937|RK4_SPIOL 50S ribosomal protein L4, chloroplastic OS=S... 29 8.3
sp|Q8KBW7|Y1665_CHLTE UPF0082 protein CT1665 OS=Chlorobium tepid... 29 8.3

>sp|A2AQW0|M3K15_MOUSE Mitogen-activated protein kinase kinase kinase
15 OS=Mus musculus GN=Map3k15 PE=3 SV=1
Length = 1331

Score = 31.6 bits (70), Expect = 1.3
Identities = 17/49 (34%), Positives = 26/49 (53%)
Frame = +2

Query: 80 HKDCLPILLDKNLEELQNLQIQYSLRTNVSNLNPPKLSSGRSTKPRLID 226
+++ L ++LD+ +EL +LQ+QY N PP G T LID
Sbjct: 1223 YQNLLRLILDQKTQELYHLQLQYKSNGGTENPPPP---DGLGTDRELID 1268


>sp|P83636|MIH_ORCLI Molt-inhibiting hormone OS=Orconectes limosus
PE=1 SV=2
Length = 106

Score = 30.8 bits (68), Expect = 2.2
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = -3

Query: 319 RTAAHFVFEELSGCLGNEALGSKAWTMC 236
+T A +VFEE G +GN AL K +C
Sbjct: 26 QTTARYVFEECPGVMGNRALHGKVTRVC 53


>sp|O36041|IF2G_SPIVO Eukaryotic translation initiation factor 2
subunit gamma (Fragment) OS=Spironucleus vortens PE=3
SV=1
Length = 210

Score = 30.0 bits (66), Expect = 3.7
Identities = 16/53 (30%), Positives = 27/53 (50%)
Frame = +2

Query: 29 QNQTSYLELPIKIHLVAHKDCLPILLDKNLEELQNLQIQYSLRTNVSNLNPPK 187
Q Q +Y E+ +H ++ + +PI +QNL I Y L+ V + PP+
Sbjct: 150 QAQNNYQEIQAFVHGISDINVVPI------SAIQNLNIDYILKHLVETITPPR 196


>sp|O49937|RK4_SPIOL 50S ribosomal protein L4, chloroplastic
OS=Spinacia oleracea GN=RPL4 PE=1 SV=1
Length = 293

Score = 28.9 bits (63), Expect = 8.3
Identities = 17/39 (43%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = -1

Query: 270 MKL*VQKHGRCAYLLSISLGLVDLPELNFGGFKL-ETFV 157
+KL H + + LSI L+ LP LNF G K+ ETF+
Sbjct: 32 LKLPSSSHSQTSLSLSIKSELIPLPILNFSGEKVGETFL 70


>sp|Q8KBW7|Y1665_CHLTE UPF0082 protein CT1665 OS=Chlorobium tepidum
GN=CT1665 PE=3 SV=1
Length = 251

Score = 28.9 bits (63), Expect = 8.3
Identities = 15/39 (38%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Frame = +2

Query: 74 VAHKDCLPILLDKNLEELQNLQIQY-SLRTNVSNLNPPK 187
++ D + +LLD LEEL++ QY ++ T+V +L P K
Sbjct: 147 ISEDDLMELLLDAGLEELESDDEQYFTVLTDVKDLEPVK 185


tr_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP921044|Adiantum capillus-veneris mRNA, clone:
YMU001_000144_H05.
(369 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done

***** No hits found ******