BP921046 |
Clone id |
YMU001_000144_H07 |
Library |
YMU01 |
Length |
415 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000144_H07. |
Accession |
BP921046 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
TGGAACCCCAAGCAGTTCTATATGCAGATCCGTATCCCTTAGAAGTCTGAAGGTGGCACT AGCCTACAACGAAGCCATAGGAAGCAATTCATTGCAACTGCAAGGAATACCTTTGCTGCA GAAAACTTTCCTTGCAGCGCTTGCAATACACATTGATGATCTATTAAATGTCCAGCTACC TGGAGGTGCAACAAGCACACTTGCAACAGATCTTCTCAACTACTTGAGAAGCTTTCAAAG TGGTCGTCATTGGACACCTATAACTAACCCTGCTTTACTTGCATTCTACTTGCAATGGTA CAATATCCCTTGCCCTGCTCGACTCTGTGACGCTTTCAAGCAATTTGCAAGCTTTCTCGC TGTGTGTCCTGTAAATGCTGATTGCTCTTTCAGCTTACCTTGGGTAGCCTTACTG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q07878 |
Definition |
sp|Q07878|VPS13_YEAST Vacuolar protein sorting-associated protein 13 OS=Saccharomyces cerevisiae |
Align length |
45 |
Score (bit) |
30.0 |
E-value |
3.8 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q5W783 |
Definition |
tr|Q5W783|Q5W783_ORYSJ Putative uncharacterized protein OJ1537_B05.6 OS=Oryza sativa subsp. japonica |
Align length |
99 |
Score (bit) |
38.5 |
E-value |
0.17 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP921046|Adiantum capillus-veneris mRNA, clone: YMU001_000144_H07. (415 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q5W783|Q5W783_ORYSJ Putative uncharacterized protein OJ1537_B... 39 0.17 tr|Q0DIX4|Q0DIX4_ORYSJ Os05g0354300 protein (Fragment) OS=Oryza ... 39 0.17 tr|B8AX27|B8AX27_ORYSI Putative uncharacterized protein OS=Oryza... 39 0.17 tr|A3B311|A3B311_ORYSJ Putative uncharacterized protein OS=Oryza... 39 0.17 tr|Q9FFF9|Q9FFF9_ARATH Meiotic check point regulator-like protei... 37 0.49 tr|A7Q3J7|A7Q3J7_VITVI Chromosome chr13 scaffold_48, whole genom... 36 1.1 tr|A7S589|A7S589_NEMVE Predicted protein (Fragment) OS=Nematoste... 35 1.9 tr|A3XDK3|A3XDK3_9RHOB Methyl-accepting chemotaxis protein McpI ... 33 9.2
>tr|Q5W783|Q5W783_ORYSJ Putative uncharacterized protein OJ1537_B05.6 OS=Oryza sativa subsp. japonica GN=OJ1537_B05.6 PE=4 SV=1 Length = 829
Score = 38.5 bits (88), Expect = 0.17 Identities = 33/99 (33%), Positives = 45/99 (45%), Gaps = 1/99 (1%) Frame = +2
Query: 50 KVALAYNEAIGSNSLQLQGIPLLQKTFXXXXXXXXXXXXNVQLPGGATSTLATDLLNYLR 229 KVA AYNEA+ + GI +Q TF +LP L +NYL Sbjct: 698 KVASAYNEALIDGRITTGGI--IQSTFLESLMKRIEYIF-AELPN-----LHDSFINYLN 749
Query: 230 SFQSGRHWTPITNPA-LLAFYLQWYNIPCPARLCDAFKQ 343 + W N A LL++YLQWY+IP P + A ++ Sbjct: 750 KGK----WPDAQNEAVLLSWYLQWYSIPPPHIVSSAIEK 784
>tr|Q0DIX4|Q0DIX4_ORYSJ Os05g0354300 protein (Fragment) OS=Oryza sativa subsp. japonica GN=Os05g0354300 PE=4 SV=1 Length = 938
Score = 38.5 bits (88), Expect = 0.17 Identities = 33/99 (33%), Positives = 45/99 (45%), Gaps = 1/99 (1%) Frame = +2
Query: 50 KVALAYNEAIGSNSLQLQGIPLLQKTFXXXXXXXXXXXXNVQLPGGATSTLATDLLNYLR 229 KVA AYNEA+ + GI +Q TF +LP L +NYL Sbjct: 807 KVASAYNEALIDGRITTGGI--IQSTFLESLMKRIEYIF-AELPN-----LHDSFINYLN 858
Query: 230 SFQSGRHWTPITNPA-LLAFYLQWYNIPCPARLCDAFKQ 343 + W N A LL++YLQWY+IP P + A ++ Sbjct: 859 KGK----WPDAQNEAVLLSWYLQWYSIPPPHIVSSAIEK 893
>tr|B8AX27|B8AX27_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_19594 PE=4 SV=1 Length = 1799
Score = 38.5 bits (88), Expect = 0.17 Identities = 31/99 (31%), Positives = 44/99 (44%), Gaps = 1/99 (1%) Frame = +2
Query: 50 KVALAYNEAIGSNSLQLQGIPLLQKTFXXXXXXXXXXXXNVQLPGGATSTLATDLLNYLR 229 KVA AYNEA+ + GI +Q TF ++ L +NYL Sbjct: 1668 KVASAYNEALIDGRITTGGI--IQSTFLESLMK------RIEYIFAGLPNLHDSFINYLN 1719
Query: 230 SFQSGRHWTPITNPA-LLAFYLQWYNIPCPARLCDAFKQ 343 + W N A LL++YLQWY+IP P + A ++ Sbjct: 1720 KGK----WPDAQNEAVLLSWYLQWYSIPPPHIVSSAIEK 1754
>tr|A3B311|A3B311_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_017433 PE=4 SV=1 Length = 1702
Score = 38.5 bits (88), Expect = 0.17 Identities = 33/99 (33%), Positives = 45/99 (45%), Gaps = 1/99 (1%) Frame = +2
Query: 50 KVALAYNEAIGSNSLQLQGIPLLQKTFXXXXXXXXXXXXNVQLPGGATSTLATDLLNYLR 229 KVA AYNEA+ + GI +Q TF +LP L +NYL Sbjct: 1571 KVASAYNEALIDGRITTGGI--IQSTFLESLMKRIEYIF-AELPN-----LHDSFINYLN 1622
Query: 230 SFQSGRHWTPITNPA-LLAFYLQWYNIPCPARLCDAFKQ 343 + W N A LL++YLQWY+IP P + A ++ Sbjct: 1623 KGK----WPDAQNEAVLLSWYLQWYSIPPPHIVSSAIEK 1657
>tr|Q9FFF9|Q9FFF9_ARATH Meiotic check point regulator-like protein OS=Arabidopsis thaliana GN=At5g05560 PE=4 SV=1 Length = 1678
Score = 37.0 bits (84), Expect = 0.49 Identities = 29/107 (27%), Positives = 47/107 (43%), Gaps = 6/107 (5%) Frame = +2
Query: 50 KVALAYNEAIGSNSLQLQGIPLLQKTFXXXXXXXXXXXXNVQLPGGATSTLATDLLNYLR 229 +VALAYNEA+ + L G +Q F N +T+L LR Sbjct: 1548 QVALAYNEAVSTGRLASSG-GFVQSIFLASLRKRCEEVLNC----------STELKINLR 1596
Query: 230 SFQSGRHWTPITNPAL------LAFYLQWYNIPCPARLCDAFKQFAS 352 ++ + W N L L++YL+W+N+P P+ + A ++ S Sbjct: 1597 NYLTSEAWPYDKNSKLQKDIIILSWYLKWFNVPSPSIIKAAVEKIKS 1643
>tr|A7Q3J7|A7Q3J7_VITVI Chromosome chr13 scaffold_48, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00029314001 PE=4 SV=1 Length = 1796
Score = 35.8 bits (81), Expect = 1.1 Identities = 30/97 (30%), Positives = 41/97 (42%), Gaps = 7/97 (7%) Frame = +2
Query: 50 KVALAYNEAIGSNSLQLQGIPLLQKTFXXXXXXXXXXXXNVQLPGGATSTLATDLLNYLR 229 K+ALAYNEA+ S L ++Q F N PG L D NYL Sbjct: 1666 KLALAYNEALLSGRLTASKGGIVQPVFIGSLMRRVEGLLNYS-PG-----LKNDFYNYLN 1719
Query: 230 -------SFQSGRHWTPITNPALLAFYLQWYNIPCPA 319 Q G+ + LL++YLQW+ +P P+ Sbjct: 1720 LGKWPSEESQGGK------DSILLSWYLQWFCVPAPS 1750
>tr|A7S589|A7S589_NEMVE Predicted protein (Fragment) OS=Nematostella vectensis GN=v1g105043 PE=4 SV=1 Length = 428
Score = 35.0 bits (79), Expect = 1.9 Identities = 30/96 (31%), Positives = 38/96 (39%), Gaps = 6/96 (6%) Frame = +1
Query: 64 LQRSHRKQFIATARNTFAAENFPCS---ACNTH**SIKCPATWRCNKH--TCNRSSQLLE 228 L R H QF + + FPCS C+TH C +C+ H C+ Q Sbjct: 237 LDRCHTHQFPCSLLDQCHTHQFPCSLLDQCHTH--QFPCSLLDQCHTHQFPCSLLDQCHT 294
Query: 229 KLSKWSSLDTYN*PCFTCILLAMVQ-YPLPCSTL*R 333 S LD + F C LL +P PCS L R Sbjct: 295 HQFPCSLLDQCHAHQFPCSLLDQCHTHPFPCSLLDR 330
>tr|A3XDK3|A3XDK3_9RHOB Methyl-accepting chemotaxis protein McpI OS=Roseobacter sp. MED193 GN=MED193_13128 PE=4 SV=1 Length = 526
Score = 32.7 bits (73), Expect = 9.2 Identities = 24/81 (29%), Positives = 34/81 (41%), Gaps = 4/81 (4%) Frame = +2
Query: 179 PGGATSTLATDLLNYLRSFQSGRHWTPITNPALLAFYL----QWYNIPCPARLCDAFKQF 346 P GA A+ +L RS Q W + PA+ AFYL W+ C + + F Sbjct: 6 PTGAKPEAASSILTNERSIQQITSWLLVPGPAVAAFYLNGNPNWWVFACLSLVLGVFAYV 65
Query: 347 ASFLAVCPVNADCSFSLPWVA 409 + A+ P D S +VA Sbjct: 66 SK--ALPPSTRDYLLSFCFVA 84
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