BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP921048|Adiantum capillus-veneris mRNA, clone:
YMU001_000144_H09.
         (269 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q1LSQ2|MUTL_BAUCH DNA mismatch repair protein mutL OS=Baumann...    31   2.2  
sp|Q9HUJ2|THIC_PSEAE Thiamine biosynthesis protein thiC OS=Pseud...    29   6.4  
sp|Q02F45|THIC_PSEAB Thiamine biosynthesis protein thiC OS=Pseud...    29   6.4  
sp|A6VD86|THIC_PSEA7 Thiamine biosynthesis protein thiC OS=Pseud...    29   6.4  
sp|Q54UJ6|Y3968_DICDI Uncharacterized transmembrane protein DDB_...    29   8.4  

>sp|Q1LSQ2|MUTL_BAUCH DNA mismatch repair protein mutL OS=Baumannia
           cicadellinicola subsp. Homalodisca coagulata GN=mutL
           PE=3 SV=1
          Length = 602

 Score = 30.8 bits (68), Expect = 2.2
 Identities = 17/43 (39%), Positives = 26/43 (60%), Gaps = 5/43 (11%)
 Frame = +3

Query: 9   TFLEAFIVNQLHTW-HQRA----ANMERLCPKTVFNPGNTLVV 122
           ++L   + +Q+ TW + RA    A +ERLCP  + NP N L+V
Sbjct: 546 SWLACSLNSQITTWNYSRAIPLIAEVERLCPHWIKNPPNALIV 588


>sp|Q9HUJ2|THIC_PSEAE Thiamine biosynthesis protein thiC
           OS=Pseudomonas aeruginosa GN=thiC PE=3 SV=1
          Length = 627

 Score = 29.3 bits (64), Expect = 6.4
 Identities = 13/35 (37%), Positives = 22/35 (62%)
 Frame = -2

Query: 160 IPTLHKRMVEQ**TTRVLPGLKTVFGQSRSIFAAL 56
           +P +  R +++   T +LPGL + FGQ+R   A+L
Sbjct: 84  LPDVRSRWIDERGDTEILPGLTSEFGQARLADASL 118


>sp|Q02F45|THIC_PSEAB Thiamine biosynthesis protein thiC
           OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=thiC
           PE=3 SV=1
          Length = 627

 Score = 29.3 bits (64), Expect = 6.4
 Identities = 13/35 (37%), Positives = 22/35 (62%)
 Frame = -2

Query: 160 IPTLHKRMVEQ**TTRVLPGLKTVFGQSRSIFAAL 56
           +P +  R +++   T +LPGL + FGQ+R   A+L
Sbjct: 84  LPDVRSRWIDERGDTEILPGLTSEFGQARLADASL 118


>sp|A6VD86|THIC_PSEA7 Thiamine biosynthesis protein thiC
           OS=Pseudomonas aeruginosa (strain PA7) GN=thiC PE=3 SV=1
          Length = 627

 Score = 29.3 bits (64), Expect = 6.4
 Identities = 13/35 (37%), Positives = 22/35 (62%)
 Frame = -2

Query: 160 IPTLHKRMVEQ**TTRVLPGLKTVFGQSRSIFAAL 56
           +P +  R +++   T +LPGL + FGQ+R   A+L
Sbjct: 84  LPDVRSRWIDERGDTEILPGLTSEFGQARLADASL 118


>sp|Q54UJ6|Y3968_DICDI Uncharacterized transmembrane protein
           DDB_G0281039 OS=Dictyostelium discoideum GN=DDB_G0281039
           PE=4 SV=1
          Length = 375

 Score = 28.9 bits (63), Expect = 8.4
 Identities = 12/35 (34%), Positives = 23/35 (65%)
 Frame = +1

Query: 40  YIRGIREQQIWSGFVQRPSSTLATPLLFITAQPFF 144
           + +G +  Q+++G   +PSS  A+P+LF +  PF+
Sbjct: 285 HFQGFQPSQVFTG--SQPSSNSASPILFNSENPFY 317

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP921048|Adiantum capillus-veneris mRNA, clone:
YMU001_000144_H09.
         (269 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done

 ***** No hits found ******